RNA–Protein interactions for RNA: ENST00000496101.5

GCOM1-211, Transcript of GRINL1A complex locus 1, humanhuman

TSL 1 (best)

Gene GCOM1, Length 2,032 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-211ENST00000496101 LAMC1P11047 1609 aa24.8■■□□□ 1.56
GCOM1-211ENST00000496101 TTC37Q6PGP7 1564 aa24.79■■□□□ 1.56
GCOM1-211ENST00000496101 PLEKHH2Q8IVE3 1493 aa24.79■■□□□ 1.56
GCOM1-211ENST00000496101 SYCP2Q9BX26 1530 aa24.78■■□□□ 1.56
GCOM1-211ENST00000496101 MYO5CQ9NQX4 1742 aa24.78■■□□□ 1.56
GCOM1-211ENST00000496101 IQGAP3Q86VI3 1631 aa24.78■■□□□ 1.56
GCOM1-211ENST00000496101 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.76■■□□□ 1.55
GCOM1-211ENST00000496101 FANCIQ9NVI1 1328 aa24.76■■□□□ 1.55
GCOM1-211ENST00000496101 PRAG1Q86YV5 1406 aa24.75■■□□□ 1.55
GCOM1-211ENST00000496101 ARHGAP5Q13017 1502 aa24.75■■□□□ 1.55
GCOM1-211ENST00000496101 ABCC2Q92887 1545 aa24.74■■□□□ 1.55
GCOM1-211ENST00000496101 CCDC144AA2RUR9 1427 aa24.73■■□□□ 1.55
GCOM1-211ENST00000496101 BRD4O60885 1362 aaPredicted RBP24.72■■□□□ 1.55
GCOM1-211ENST00000496101 RNF123Q5XPI4 1314 aa24.72■■□□□ 1.55
GCOM1-211ENST00000496101 DNAJC5Q9H3Z4 198 aa24.72■■□□□ 1.55
GCOM1-211ENST00000496101 NUDCQ9Y266 331 aa24.72■■□□□ 1.55
GCOM1-211ENST00000496101 DCAF11Q8TEB1 546 aa24.71■■□□□ 1.55
GCOM1-211ENST00000496101 MAGI2Q86UL8 1455 aa24.71■■□□□ 1.55
GCOM1-211ENST00000496101 LRPPRCP42704 1394 aaKnown RBP24.71■■□□□ 1.55
GCOM1-211ENST00000496101 GPRASP1Q5JY77 1395 aa24.71■■□□□ 1.55
GCOM1-211ENST00000496101 PNISRQ8TF01 805 aaKnown RBP24.71■■□□□ 1.55
GCOM1-211ENST00000496101 EIF2AK4Q9P2K8 1649 aaKnown RBP24.71■■□□□ 1.55
GCOM1-211ENST00000496101 POLR3GLQ9BT43 218 aa24.7■■□□□ 1.54
GCOM1-211ENST00000496101 ST20-MTHFSA0A0A6YYL1 179 aa24.69■■□□□ 1.54
GCOM1-211ENST00000496101 RALBP1Q15311 655 aa24.69■■□□□ 1.54
GCOM1-211ENST00000496101 DUOX2Q9NRD8 1548 aa24.69■■□□□ 1.54
GCOM1-211ENST00000496101 ATP10AO60312 1499 aa24.69■■□□□ 1.54
GCOM1-211ENST00000496101 PLA2R1Q13018 1463 aa24.67■■□□□ 1.54
GCOM1-211ENST00000496101 MYBBP1AQ9BQG0 1328 aaKnown RBP24.67■■□□□ 1.54
GCOM1-211ENST00000496101 PRDM15P57071 1507 aaPredicted RBP24.66■■□□□ 1.54
GCOM1-211ENST00000496101 KDM2AQ9Y2K7 1162 aa24.66■■□□□ 1.54
GCOM1-211ENST00000496101 TMC1Q8TDI8 760 aa24.65■■□□□ 1.54
GCOM1-211ENST00000496101 A2MP01023 1474 aa24.65■■□□□ 1.54
GCOM1-211ENST00000496101 ERBINQ96RT1 1412 aa24.65■■□□□ 1.54
GCOM1-211ENST00000496101 COL17A1Q9UMD9 1497 aaPredicted RBP24.62■■□□□ 1.53
GCOM1-211ENST00000496101 RNF17Q9BXT8 1623 aaKnown RBP24.59■■□□□ 1.53
GCOM1-211ENST00000496101 PARD3Q8TEW0 1356 aa24.59■■□□□ 1.53
GCOM1-211ENST00000496101 B4GALNT3Q6L9W6 998 aa24.58■■□□□ 1.53
GCOM1-211ENST00000496101 UHRF1BP1LA0JNW5 1464 aa24.57■■□□□ 1.52
GCOM1-211ENST00000496101 PLCH2O75038 1416 aa24.57■■□□□ 1.52
GCOM1-211ENST00000496101 ZMYM4Q5VZL5 1548 aa24.57■■□□□ 1.52
GCOM1-211ENST00000496101 ABCC1P33527 1531 aa24.56■■□□□ 1.52
GCOM1-211ENST00000496101 ZCCHC11Q5TAX3 1644 aaKnown RBP24.56■■□□□ 1.52
GCOM1-211ENST00000496101 ERCC6L2Q5T890 1561 aa24.56■■□□□ 1.52
GCOM1-211ENST00000496101 WASHC2CQ9Y4E1 1318 aa24.56■■□□□ 1.52
GCOM1-211ENST00000496101 INSRP06213 1382 aa24.55■■□□□ 1.52
GCOM1-211ENST00000496101 MSH5O43196 834 aa24.54■■□□□ 1.52
GCOM1-211ENST00000496101 NLRP13Q86W25 1043 aa24.52■■□□□ 1.52
GCOM1-211ENST00000496101 ARAP3Q8WWN8 1544 aa24.52■■□□□ 1.51
GCOM1-211ENST00000496101 CNGB1Q14028 1251 aaPredicted RBP24.51■■□□□ 1.51
GCOM1-211ENST00000496101 CLASP1Q7Z460 1538 aa24.5■■□□□ 1.51
GCOM1-211ENST00000496101 PER1O15534 1290 aaPredicted RBP24.48■■□□□ 1.51
GCOM1-211ENST00000496101 NBPF1Q3BBV0 1214 aa24.47■■□□□ 1.51
GCOM1-211ENST00000496101 TESK2Q96S53 571 aa24.47■■□□□ 1.51
GCOM1-211ENST00000496101 PDE3BQ13370 1112 aa24.45■■□□□ 1.51
GCOM1-211ENST00000496101 EFCAB2Q5VUJ9 269 aa24.45■■□□□ 1.51
GCOM1-211ENST00000496101 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.45■■□□□ 1.51
GCOM1-211ENST00000496101 RTEL1-TNFRSF6BF6WH68 1400 aa24.45■■□□□ 1.5
GCOM1-211ENST00000496101 RGL3Q3MIN7 710 aa24.45■■□□□ 1.5
GCOM1-211ENST00000496101 MADDQ8WXG6 1647 aa24.44■■□□□ 1.5
GCOM1-211ENST00000496101 IQGAP1P46940 1657 aa24.44■■□□□ 1.5
GCOM1-211ENST00000496101 DISP3Q9P2K9 1392 aa24.44■■□□□ 1.5
GCOM1-211ENST00000496101 DEPDC5O75140 1603 aa24.43■■□□□ 1.5
GCOM1-211ENST00000496101 CEP152O94986 1710 aa24.43■■□□□ 1.5
GCOM1-211ENST00000496101 TRPM2O94759 1503 aa24.43■■□□□ 1.5
GCOM1-211ENST00000496101 SPHKAPQ2M3C7 1700 aa24.43■■□□□ 1.5
GCOM1-211ENST00000496101 CCDC136Q96JN2 1154 aa24.41■■□□□ 1.5
GCOM1-211ENST00000496101 BLMP54132 1417 aaPredicted RBP24.4■■□□□ 1.5
GCOM1-211ENST00000496101 ZFYVE16Q7Z3T8 1539 aa24.4■■□□□ 1.5
GCOM1-211ENST00000496101 TRAPPC8Q9Y2L5 1435 aa24.39■■□□□ 1.5
GCOM1-211ENST00000496101 TMF1P82094 1093 aa24.39■■□□□ 1.5
GCOM1-211ENST00000496101 STAC3Q96MF2 364 aa24.39■■□□□ 1.49
GCOM1-211ENST00000496101 TET3O43151 1660 aa24.37■■□□□ 1.49
GCOM1-211ENST00000496101 NEURL4Q96JN8 1562 aa24.37■■□□□ 1.49
GCOM1-211ENST00000496101 PTPRTO14522 1441 aa24.36■■□□□ 1.49
GCOM1-211ENST00000496101 RRP1P56182 461 aaKnown RBP24.35■■□□□ 1.49
GCOM1-211ENST00000496101 ERICH6Q7L0X2 663 aa24.35■■□□□ 1.49
GCOM1-211ENST00000496101 SCAPERQ9BY12 1400 aa24.34■■□□□ 1.49
GCOM1-211ENST00000496101 KIAA1210Q9ULL0 1709 aa24.33■■□□□ 1.49
GCOM1-211ENST00000496101 INO80Q9ULG1 1556 aaPredicted RBP24.33■■□□□ 1.49
GCOM1-211ENST00000496101 SYNMO15061 1565 aa24.32■■□□□ 1.48
GCOM1-211ENST00000496101 VWDEQ8N2E2 1590 aa24.32■■□□□ 1.48
GCOM1-211ENST00000496101 CLTCL1P53675 1640 aa24.32■■□□□ 1.48
GCOM1-211ENST00000496101 ABCA9Q8IUA7 1624 aa24.31■■□□□ 1.48
GCOM1-211ENST00000496101 PANK3Q9H999 370 aa24.31■■□□□ 1.48
GCOM1-211ENST00000496101 RCAN3Q9UKA8 241 aa24.31■■□□□ 1.48
GCOM1-211ENST00000496101 WDR7Q9Y4E6 1490 aa24.31■■□□□ 1.48
GCOM1-211ENST00000496101 SPAG9O60271 1321 aaKnown RBP24.3■■□□□ 1.48
GCOM1-211ENST00000496101 SCAF11Q99590 1463 aaKnown RBP24.28■■□□□ 1.48
GCOM1-211ENST00000496101 ATP7AQ04656 1500 aa24.27■■□□□ 1.48
GCOM1-211ENST00000496101 CDCA8Q53HL2 280 aa24.24■■□□□ 1.47
GCOM1-211ENST00000496101 CC2D1BQ5T0F9 858 aaKnown RBP24.24■■□□□ 1.47
GCOM1-211ENST00000496101 SENP3-EIF4A1A0A087X0R7 540 aa24.23■■□□□ 1.47
GCOM1-211ENST00000496101 MYOM1P52179 1685 aa24.22■■□□□ 1.47
GCOM1-211ENST00000496101 MYT1LQ9UL68 1186 aa24.22■■□□□ 1.47
GCOM1-211ENST00000496101 KANK1Q14678 1352 aa24.21■■□□□ 1.47
GCOM1-211ENST00000496101 NPC1L1Q9UHC9 1359 aa24.2■■□□□ 1.46
GCOM1-211ENST00000496101 ASXL1Q8IXJ9 1541 aa24.19■■□□□ 1.46
GCOM1-211ENST00000496101 EIF3AQ14152 1382 aaKnown RBP24.19■■□□□ 1.46
GCOM1-211ENST00000496101 MYOM2P54296 1465 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms