RNA–Protein interactions for RNA: ENST00000494795.1

SAMM50-206, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 3,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-206ENST00000494795 KDM5DQ9BY66 1539 aa14.56□□□□□ -0.08
SAMM50-206ENST00000494795 MYT1LQ9UL68 1186 aa14.56□□□□□ -0.08
SAMM50-206ENST00000494795 SPAG9O60271 1321 aaKnown RBP14.55□□□□□ -0.08
SAMM50-206ENST00000494795 NBPF1Q3BBV0 1214 aa14.54□□□□□ -0.08
SAMM50-206ENST00000494795 USP47Q96K76 1375 aa14.54□□□□□ -0.08
SAMM50-206ENST00000494795 BCORL1Q5H9F3 1711 aa14.53□□□□□ -0.08
SAMM50-206ENST00000494795 FANCAO15360 1455 aa14.53□□□□□ -0.08
SAMM50-206ENST00000494795 MAST1Q9Y2H9 1570 aa14.53□□□□□ -0.08
SAMM50-206ENST00000494795 SCAPERQ9BY12 1400 aa14.52□□□□□ -0.08
SAMM50-206ENST00000494795 CARD11Q9BXL7 1154 aa14.52□□□□□ -0.09
SAMM50-206ENST00000494795 SENP3-EIF4A1A0A087X0R7 540 aa14.51□□□□□ -0.09
SAMM50-206ENST00000494795 ZBTB22O15209 634 aa14.51□□□□□ -0.09
SAMM50-206ENST00000494795 ST20-MTHFSA0A0A6YYL1 179 aa14.51□□□□□ -0.09
SAMM50-206ENST00000494795 PLXNC1O60486 1568 aa14.5□□□□□ -0.09
SAMM50-206ENST00000494795 UNC13BO14795 1591 aa14.49□□□□□ -0.09
SAMM50-206ENST00000494795 CCDC144AA2RUR9 1427 aa14.49□□□□□ -0.09
SAMM50-206ENST00000494795 DUOX2Q9NRD8 1548 aa14.49□□□□□ -0.09
SAMM50-206ENST00000494795 CNTLNQ9NXG0 1405 aa14.49□□□□□ -0.09
SAMM50-206ENST00000494795 CCER2I3L3R5 266 aa14.48□□□□□ -0.09
SAMM50-206ENST00000494795 KIF3BO15066 747 aa14.48□□□□□ -0.09
SAMM50-206ENST00000494795 ZFYVE16Q7Z3T8 1539 aa14.48□□□□□ -0.09
SAMM50-206ENST00000494795 ADGRL1O94910 1474 aa14.47□□□□□ -0.09
SAMM50-206ENST00000494795 CYB5RLQ6IPT4 315 aa14.47□□□□□ -0.09
SAMM50-206ENST00000494795 KDM5CP41229 1560 aa14.46□□□□□ -0.09
SAMM50-206ENST00000494795 A2MP01023 1474 aa14.46□□□□□ -0.09
SAMM50-206ENST00000494795 ABCA9Q8IUA7 1624 aa14.46□□□□□ -0.09
SAMM50-206ENST00000494795 PRKRIP1Q9H875 184 aaPredicted RBP14.46□□□□□ -0.09
SAMM50-206ENST00000494795 UHRF1BP1Q6BDS2 1440 aa14.46□□□□□ -0.1
SAMM50-206ENST00000494795 IQGAP3Q86VI3 1631 aa14.45□□□□□ -0.1
SAMM50-206ENST00000494795 NPM1P06748 294 aaKnown RBP eCLIP14.45□□□□□ -0.1
SAMM50-206ENST00000494795 ERBINQ96RT1 1412 aa14.45□□□□□ -0.1
SAMM50-206ENST00000494795 RAPGEF3O95398 923 aa14.44□□□□□ -0.1
SAMM50-206ENST00000494795 ROCK2O75116 1388 aaKnown RBP14.44□□□□□ -0.1
SAMM50-206ENST00000494795 RALGAPBQ86X10 1494 aa14.44□□□□□ -0.1
SAMM50-206ENST00000494795 MAGI2Q86UL8 1455 aa14.43□□□□□ -0.1
SAMM50-206ENST00000494795 SUPT16HQ9Y5B9 1047 aaKnown RBP14.43□□□□□ -0.1
SAMM50-206ENST00000494795 FAM9BQ8IZU0 186 aa14.42□□□□□ -0.1
SAMM50-206ENST00000494795 PRAG1Q86YV5 1406 aa14.42□□□□□ -0.1
SAMM50-206ENST00000494795 ATP7AQ04656 1500 aa14.42□□□□□ -0.1
SAMM50-206ENST00000494795 HNRNPUQ00839 825 aaKnown RBP eCLIP14.41□□□□□ -0.1
SAMM50-206ENST00000494795 BCANQ96GW7 911 aa14.41□□□□□ -0.1
SAMM50-206ENST00000494795 E9PCH4 1651 aa14.41□□□□□ -0.1
SAMM50-206ENST00000494795 UGGT1Q9NYU2 1555 aa14.41□□□□□ -0.1
SAMM50-206ENST00000494795 CD109Q6YHK3 1445 aa14.4□□□□□ -0.1
SAMM50-206ENST00000494795 DHX29Q7Z478 1369 aaKnown RBP14.4□□□□□ -0.1
SAMM50-206ENST00000494795 ATP10AO60312 1499 aa14.39□□□□□ -0.11
SAMM50-206ENST00000494795 RTEL1-TNFRSF6BF6WH68 1400 aa14.39□□□□□ -0.11
SAMM50-206ENST00000494795 INO80Q9ULG1 1556 aaPredicted RBP14.39□□□□□ -0.11
SAMM50-206ENST00000494795 ARAP3Q8WWN8 1544 aa14.39□□□□□ -0.11
SAMM50-206ENST00000494795 MRS2Q9HD23 443 aa14.38□□□□□ -0.11
SAMM50-206ENST00000494795 GGT6Q6P531 493 aa14.37□□□□□ -0.11
SAMM50-206ENST00000494795 KIDINS220Q9ULH0 1771 aa14.37□□□□□ -0.11
SAMM50-206ENST00000494795 TRPM1Q7Z4N2 1603 aa14.36□□□□□ -0.11
SAMM50-206ENST00000494795 MROH1Q8NDA8 1641 aa14.35□□□□□ -0.11
SAMM50-206ENST00000494795 CFAP65Q6ZU64 1925 aaKnown RBP14.34□□□□□ -0.11
SAMM50-206ENST00000494795 POLR1AO95602 1720 aaPredicted RBP14.34□□□□□ -0.11
SAMM50-206ENST00000494795 AMER1Q5JTC6 1135 aaPredicted RBP14.34□□□□□ -0.11
SAMM50-206ENST00000494795 DISP3Q9P2K9 1392 aa14.34□□□□□ -0.11
SAMM50-206ENST00000494795 CLTCL1P53675 1640 aa14.33□□□□□ -0.11
SAMM50-206ENST00000494795 TESK2Q96S53 571 aa14.33□□□□□ -0.12
SAMM50-206ENST00000494795 FKBP8Q14318 412 aa14.33□□□□□ -0.12
SAMM50-206ENST00000494795 DEPDC5O75140 1603 aa14.32□□□□□ -0.12
SAMM50-206ENST00000494795 IRX6P78412 446 aaPredicted RBP14.32□□□□□ -0.12
SAMM50-206ENST00000494795 NUTM2DQ5VT03 806 aaPredicted RBP14.3□□□□□ -0.12
SAMM50-206ENST00000494795 FRMPD1Q5SYB0 1578 aa14.3□□□□□ -0.12
SAMM50-206ENST00000494795 ZNF518AQ6AHZ1 1483 aa14.3□□□□□ -0.12
SAMM50-206ENST00000494795 POGZQ7Z3K3 1410 aa14.3□□□□□ -0.12
SAMM50-206ENST00000494795 PTPRTO14522 1441 aa14.29□□□□□ -0.12
SAMM50-206ENST00000494795 PRDM15P57071 1507 aaPredicted RBP14.29□□□□□ -0.12
SAMM50-206ENST00000494795 ADGRF5Q8IZF2 1346 aa14.29□□□□□ -0.12
SAMM50-206ENST00000494795 CHGAP10645 457 aaKnown RBP14.29□□□□□ -0.12
SAMM50-206ENST00000494795 VWDEQ8N2E2 1590 aa14.29□□□□□ -0.12
SAMM50-206ENST00000494795 SPHKAPQ2M3C7 1700 aa14.28□□□□□ -0.12
SAMM50-206ENST00000494795 CFAP70Q5T0N1 1121 aa14.28□□□□□ -0.12
SAMM50-206ENST00000494795 TRPM2O94759 1503 aa14.28□□□□□ -0.12
SAMM50-206ENST00000494795 GPRASP1Q5JY77 1395 aa14.28□□□□□ -0.12
SAMM50-206ENST00000494795 CEP152O94986 1710 aa14.27□□□□□ -0.13
SAMM50-206ENST00000494795 KANK1Q14678 1352 aa14.27□□□□□ -0.13
SAMM50-206ENST00000494795 PPRC1Q5VV67 1664 aaKnown RBP14.26□□□□□ -0.13
SAMM50-206ENST00000494795 YEATS2Q9ULM3 1422 aa14.26□□□□□ -0.13
SAMM50-206ENST00000494795 TET3O43151 1660 aa14.26□□□□□ -0.13
SAMM50-206ENST00000494795 ABCA6Q8N139 1617 aa14.25□□□□□ -0.13
SAMM50-206ENST00000494795 FAM69CQ0P6D2 419 aa14.25□□□□□ -0.13
SAMM50-206ENST00000494795 CC2D1BQ5T0F9 858 aaKnown RBP14.25□□□□□ -0.13
SAMM50-206ENST00000494795 RIMBP3CA6NJZ7 1639 aa14.24□□□□□ -0.13
SAMM50-206ENST00000494795 RIMBP3BA6NNM3 1639 aa14.24□□□□□ -0.13
SAMM50-206ENST00000494795 MADDQ8WXG6 1647 aa14.24□□□□□ -0.13
SAMM50-206ENST00000494795 RIMBP3Q9UFD9 1639 aa14.24□□□□□ -0.13
SAMM50-206ENST00000494795 PER1O15534 1290 aaPredicted RBP14.24□□□□□ -0.13
SAMM50-206ENST00000494795 NPATQ14207 1427 aa14.23□□□□□ -0.13
SAMM50-206ENST00000494795 PANK3Q9H999 370 aa14.23□□□□□ -0.13
SAMM50-206ENST00000494795 WASHC2CQ9Y4E1 1318 aa14.23□□□□□ -0.13
SAMM50-206ENST00000494795 MROH2AA6NES4 1674 aa14.22□□□□□ -0.13
SAMM50-206ENST00000494795 EFCAB6Q5THR3 1501 aa14.21□□□□□ -0.13
SAMM50-206ENST00000494795 MLH3Q9UHC1 1453 aa14.21□□□□□ -0.13
SAMM50-206ENST00000494795 ARID4BQ4LE39 1312 aaPredicted RBP14.21□□□□□ -0.13
SAMM50-206ENST00000494795 HECW2Q9P2P5 1572 aa14.21□□□□□ -0.14
SAMM50-206ENST00000494795 COL17A1Q9UMD9 1497 aaPredicted RBP14.2□□□□□ -0.14
SAMM50-206ENST00000494795 SALL2Q9Y467 1007 aaPredicted RBP14.2□□□□□ -0.14
SAMM50-206ENST00000494795 TSPOAP1O95153 1857 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms