RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 GOLGA6L3A6NEY3 463 aa13.12□□□□□ -0.31
LINC00488-201ENST00000494582 HMGXB3Q12766 1538 aa13.12□□□□□ -0.31
LINC00488-201ENST00000494582 NLRP1Q9C000 1473 aa13.12□□□□□ -0.31
LINC00488-201ENST00000494582 SAMD9Q5K651 1589 aa13.11□□□□□ -0.31
LINC00488-201ENST00000494582 RAD54L2Q9Y4B4 1467 aa13.1□□□□□ -0.31
LINC00488-201ENST00000494582 VIRMAQ69YN4 1812 aaKnown RBP13.1□□□□□ -0.31
LINC00488-201ENST00000494582 CARD11Q9BXL7 1154 aa13.09□□□□□ -0.31
LINC00488-201ENST00000494582 ZMYM4Q5VZL5 1548 aa13.08□□□□□ -0.32
LINC00488-201ENST00000494582 IGHDP01880 384 aa13.08□□□□□ -0.32
LINC00488-201ENST00000494582 PRDM2Q13029 1718 aa13.08□□□□□ -0.32
LINC00488-201ENST00000494582 RALGAPBQ86X10 1494 aa13.08□□□□□ -0.32
LINC00488-201ENST00000494582 DAPK1P53355 1430 aa13.08□□□□□ -0.32
LINC00488-201ENST00000494582 DUSP27Q5VZP5 1158 aa13.07□□□□□ -0.32
LINC00488-201ENST00000494582 PLEKHH1Q9ULM0 1364 aa13.07□□□□□ -0.32
LINC00488-201ENST00000494582 PER1O15534 1290 aaPredicted RBP13.07□□□□□ -0.32
LINC00488-201ENST00000494582 ZNF644Q9H582 1327 aaPredicted RBP13.07□□□□□ -0.32
LINC00488-201ENST00000494582 ZNF608Q9ULD9 1512 aaPredicted RBP13.06□□□□□ -0.32
LINC00488-201ENST00000494582 ABCC5O15440 1437 aa13.06□□□□□ -0.32
LINC00488-201ENST00000494582 CC2D1BQ5T0F9 858 aaKnown RBP13.06□□□□□ -0.32
LINC00488-201ENST00000494582 SPRYD3Q8NCJ5 442 aa13.06□□□□□ -0.32
LINC00488-201ENST00000494582 PRDM4Q9UKN5 801 aa13.06□□□□□ -0.32
LINC00488-201ENST00000494582 ROCK1Q13464 1354 aa13.05□□□□□ -0.32
LINC00488-201ENST00000494582 ESPNB1AK53 854 aa13.05□□□□□ -0.32
LINC00488-201ENST00000494582 TBC1D2Q9BYX2 928 aa13.05□□□□□ -0.32
LINC00488-201ENST00000494582 ARID3CA6NKF2 412 aa13.05□□□□□ -0.32
LINC00488-201ENST00000494582 MCM4P33991 863 aa13.05□□□□□ -0.32
LINC00488-201ENST00000494582 UHRF1BP1Q6BDS2 1440 aa13.04□□□□□ -0.32
LINC00488-201ENST00000494582 BECN1Q14457 450 aa13.04□□□□□ -0.32
LINC00488-201ENST00000494582 ADAMTS8Q9UP79 889 aa13.03□□□□□ -0.32
LINC00488-201ENST00000494582 KIAA1107Q9UPP5 1409 aa13.03□□□□□ -0.32
LINC00488-201ENST00000494582 CDK13Q14004 1512 aaKnown RBP13.02□□□□□ -0.32
LINC00488-201ENST00000494582 PKD2Q13563 968 aa13.02□□□□□ -0.33
LINC00488-201ENST00000494582 KDM2AQ9Y2K7 1162 aa13.02□□□□□ -0.33
LINC00488-201ENST00000494582 TRAK2O60296 914 aa13.01□□□□□ -0.33
LINC00488-201ENST00000494582 CC2D2AQ9P2K1 1620 aa13.01□□□□□ -0.33
LINC00488-201ENST00000494582 CUL7Q14999 1698 aa13.01□□□□□ -0.33
LINC00488-201ENST00000494582 MRE11P49959 708 aa13.01□□□□□ -0.33
LINC00488-201ENST00000494582 RBM10P98175 930 aaKnown RBP13.01□□□□□ -0.33
LINC00488-201ENST00000494582 PDCL3Q9H2J4 239 aa13.01□□□□□ -0.33
LINC00488-201ENST00000494582 GRPEL1Q9HAV7 217 aa13.01□□□□□ -0.33
LINC00488-201ENST00000494582 ABCA10Q8WWZ4 1543 aa13.01□□□□□ -0.33
LINC00488-201ENST00000494582 DNMT1P26358 1616 aaKnown RBP13□□□□□ -0.33
LINC00488-201ENST00000494582 PLEKHH2Q8IVE3 1493 aa13□□□□□ -0.33
LINC00488-201ENST00000494582 CENPJQ9HC77 1338 aaPredicted RBP13□□□□□ -0.33
LINC00488-201ENST00000494582 A0A0U1RQG5 324 aaPredicted RBP13□□□□□ -0.33
LINC00488-201ENST00000494582 INSRP06213 1382 aa13□□□□□ -0.33
LINC00488-201ENST00000494582 ZNF521Q96K83 1311 aa13□□□□□ -0.33
LINC00488-201ENST00000494582 BCAR3O75815 825 aa13□□□□□ -0.33
LINC00488-201ENST00000494582 SPINK5Q9NQ38 1064 aaPredicted RBP12.99□□□□□ -0.33
LINC00488-201ENST00000494582 EIF3AQ14152 1382 aaKnown RBP12.99□□□□□ -0.33
LINC00488-201ENST00000494582 CALD1Q05682 793 aaKnown RBP12.99□□□□□ -0.33
LINC00488-201ENST00000494582 TBC1D32Q96NH3 1257 aa12.99□□□□□ -0.33
LINC00488-201ENST00000494582 MYH16Q9H6N6 1097 aa12.99□□□□□ -0.33
LINC00488-201ENST00000494582 EPRSP07814 1512 aaKnown RBP12.99□□□□□ -0.33
LINC00488-201ENST00000494582 GAS2L3Q86XJ1 694 aa12.98□□□□□ -0.33
LINC00488-201ENST00000494582 KIAA0586Q9BVV6 1533 aa12.98□□□□□ -0.33
LINC00488-201ENST00000494582 TPM2P07951 284 aa12.98□□□□□ -0.33
LINC00488-201ENST00000494582 NESP48681 1621 aa12.97□□□□□ -0.33
LINC00488-201ENST00000494582 CADPSQ9ULU8 1353 aa12.97□□□□□ -0.33
LINC00488-201ENST00000494582 GAPVD1Q14C86 1478 aa12.96□□□□□ -0.33
LINC00488-201ENST00000494582 RIPK4P57078 832 aa12.96□□□□□ -0.33
LINC00488-201ENST00000494582 KIAA1211Q6ZU35 1233 aa12.96□□□□□ -0.33
LINC00488-201ENST00000494582 POLA1P09884 1462 aaPredicted RBP12.96□□□□□ -0.33
LINC00488-201ENST00000494582 GOLGA2Q08379 1002 aa12.95□□□□□ -0.34
LINC00488-201ENST00000494582 SLFN5Q08AF3 891 aa12.95□□□□□ -0.34
LINC00488-201ENST00000494582 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.95□□□□□ -0.34
LINC00488-201ENST00000494582 CAMSAP2Q08AD1 1489 aa12.95□□□□□ -0.34
LINC00488-201ENST00000494582 PANK3Q9H999 370 aa12.94□□□□□ -0.34
LINC00488-201ENST00000494582 DISP3Q9P2K9 1392 aa12.94□□□□□ -0.34
LINC00488-201ENST00000494582 AAMPQ13685 434 aa12.94□□□□□ -0.34
LINC00488-201ENST00000494582 TRMT2AQ8IZ69 625 aaKnown RBP12.93□□□□□ -0.34
LINC00488-201ENST00000494582 ZNF692Q9BU19 519 aaPredicted RBP12.93□□□□□ -0.34
LINC00488-201ENST00000494582 MAPK8IP3Q9UPT6 1336 aa12.92□□□□□ -0.34
LINC00488-201ENST00000494582 KIF21AQ7Z4S6 1674 aa12.92□□□□□ -0.34
LINC00488-201ENST00000494582 DMRT2Q9Y5R5 561 aa12.92□□□□□ -0.34
LINC00488-201ENST00000494582 RTEL1-TNFRSF6BF6WH68 1400 aa12.92□□□□□ -0.34
LINC00488-201ENST00000494582 ARHGEF12Q9NZN5 1544 aa12.92□□□□□ -0.34
LINC00488-201ENST00000494582 NBPF1Q3BBV0 1214 aa12.92□□□□□ -0.34
LINC00488-201ENST00000494582 PANK1Q8TE04 598 aa12.92□□□□□ -0.34
LINC00488-201ENST00000494582 CHMP5Q9NZZ3 219 aa12.91□□□□□ -0.34
LINC00488-201ENST00000494582 COG6Q9Y2V7 657 aa12.91□□□□□ -0.34
LINC00488-201ENST00000494582 TRIM44Q96DX7 344 aaPredicted RBP12.9□□□□□ -0.34
LINC00488-201ENST00000494582 CCDC146Q8IYE0 955 aa12.9□□□□□ -0.34
LINC00488-201ENST00000494582 CLUAP1Q96AJ1 413 aa12.9□□□□□ -0.34
LINC00488-201ENST00000494582 COL17A1Q9UMD9 1497 aaPredicted RBP12.89□□□□□ -0.35
LINC00488-201ENST00000494582 TESK2Q96S53 571 aa12.89□□□□□ -0.35
LINC00488-201ENST00000494582 FANCD2Q9BXW9 1451 aa12.88□□□□□ -0.35
LINC00488-201ENST00000494582 TOPBP1Q92547 1522 aa12.88□□□□□ -0.35
LINC00488-201ENST00000494582 DNMBPQ6XZF7 1577 aa12.88□□□□□ -0.35
LINC00488-201ENST00000494582 NKTRP30414 1462 aaKnown RBP12.87□□□□□ -0.35
LINC00488-201ENST00000494582 OFD1O75665 1012 aa12.87□□□□□ -0.35
LINC00488-201ENST00000494582 PPP2R1AP30153 589 aa12.87□□□□□ -0.35
LINC00488-201ENST00000494582 PCDHB15Q9Y5E8 787 aa12.87□□□□□ -0.35
LINC00488-201ENST00000494582 WDR62O43379 1518 aa12.87□□□□□ -0.35
LINC00488-201ENST00000494582 TDRD9Q8NDG6 1382 aaKnown RBP12.87□□□□□ -0.35
LINC00488-201ENST00000494582 UPF2Q9HAU5 1272 aaKnown RBP12.87□□□□□ -0.35
LINC00488-201ENST00000494582 PDZRN3Q9UPQ7 1066 aa12.87□□□□□ -0.35
LINC00488-201ENST00000494582 TNNQ9UQP3 1299 aa12.87□□□□□ -0.35
LINC00488-201ENST00000494582 CEP170Q5SW79 1584 aa12.86□□□□□ -0.35
LINC00488-201ENST00000494582 DDIT3P35638 169 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms