RNA–Protein interactions for RNA: ENST00000494569.5

ZIC4-216, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 3,317 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-216ENST00000494569 DUOX2Q9NRD8 1548 aa15.85■□□□□ 0.13
ZIC4-216ENST00000494569 KDM5CP41229 1560 aa15.84■□□□□ 0.13
ZIC4-216ENST00000494569 ZFYVE16Q7Z3T8 1539 aa15.84■□□□□ 0.13
ZIC4-216ENST00000494569 TRIM52Q96A61 297 aa15.83■□□□□ 0.12
ZIC4-216ENST00000494569 LAMC1P11047 1609 aa15.83■□□□□ 0.12
ZIC4-216ENST00000494569 RTEL1-TNFRSF6BF6WH68 1400 aa15.82■□□□□ 0.12
ZIC4-216ENST00000494569 MROH1Q8NDA8 1641 aa15.82■□□□□ 0.12
ZIC4-216ENST00000494569 E9PCH4 1651 aa15.82■□□□□ 0.12
ZIC4-216ENST00000494569 FAM135AQ9P2D6 1515 aa15.82■□□□□ 0.12
ZIC4-216ENST00000494569 UHRF1BP1Q6BDS2 1440 aa15.82■□□□□ 0.12
ZIC4-216ENST00000494569 ERBINQ96RT1 1412 aa15.82■□□□□ 0.12
ZIC4-216ENST00000494569 ARHGEF40Q8TER5 1519 aa15.82■□□□□ 0.12
ZIC4-216ENST00000494569 MADDQ8WXG6 1647 aa15.81■□□□□ 0.12
ZIC4-216ENST00000494569 TRAPPC8Q9Y2L5 1435 aa15.81■□□□□ 0.12
ZIC4-216ENST00000494569 EIF2AK4Q9P2K8 1649 aaKnown RBP15.81■□□□□ 0.12
ZIC4-216ENST00000494569 ATP10AO60312 1499 aa15.8■□□□□ 0.12
ZIC4-216ENST00000494569 LMTK3Q96Q04 1460 aa15.8■□□□□ 0.12
ZIC4-216ENST00000494569 TRPM1Q7Z4N2 1603 aa15.8■□□□□ 0.12
ZIC4-216ENST00000494569 TSPY4P0CV99 314 aa15.8■□□□□ 0.12
ZIC4-216ENST00000494569 TSPY10P0CW01 314 aa15.8■□□□□ 0.12
ZIC4-216ENST00000494569 CFAP74Q9C0B2 1584 aa15.79■□□□□ 0.12
ZIC4-216ENST00000494569 RNF17Q9BXT8 1623 aaKnown RBP15.78■□□□□ 0.12
ZIC4-216ENST00000494569 FOXD1Q16676 465 aa15.78■□□□□ 0.12
ZIC4-216ENST00000494569 NEURL4Q96JN8 1562 aa15.78■□□□□ 0.12
ZIC4-216ENST00000494569 CEP152O94986 1710 aa15.77■□□□□ 0.12
ZIC4-216ENST00000494569 RICTORQ6R327 1708 aa15.77■□□□□ 0.12
ZIC4-216ENST00000494569 EFCAB2Q5VUJ9 269 aa15.77■□□□□ 0.12
ZIC4-216ENST00000494569 SLC4A1APQ9BWU0 796 aaKnown RBP15.77■□□□□ 0.12
ZIC4-216ENST00000494569 FANCAO15360 1455 aa15.76■□□□□ 0.11
ZIC4-216ENST00000494569 PLA2R1Q13018 1463 aa15.76■□□□□ 0.11
ZIC4-216ENST00000494569 ZMYM4Q5VZL5 1548 aa15.76■□□□□ 0.11
ZIC4-216ENST00000494569 GTF3C3Q9Y5Q9 886 aa15.75■□□□□ 0.11
ZIC4-216ENST00000494569 IFT172Q9UG01 1749 aa15.75■□□□□ 0.11
ZIC4-216ENST00000494569 KIDINS220Q9ULH0 1771 aa15.74■□□□□ 0.11
ZIC4-216ENST00000494569 RIMS1Q86UR5 1692 aaKnown RBP15.74■□□□□ 0.11
ZIC4-216ENST00000494569 NUP155O75694 1391 aa15.74■□□□□ 0.11
ZIC4-216ENST00000494569 L3MBTL2Q969R5 705 aa15.73■□□□□ 0.11
ZIC4-216ENST00000494569 ATP7AQ04656 1500 aa15.73■□□□□ 0.11
ZIC4-216ENST00000494569 SPHKAPQ2M3C7 1700 aa15.72■□□□□ 0.11
ZIC4-216ENST00000494569 RAPGEF3O95398 923 aa15.71■□□□□ 0.11
ZIC4-216ENST00000494569 PKD2Q13563 968 aa15.71■□□□□ 0.11
ZIC4-216ENST00000494569 PRDM15P57071 1507 aaPredicted RBP15.71■□□□□ 0.1
ZIC4-216ENST00000494569 TET3O43151 1660 aa15.7■□□□□ 0.1
ZIC4-216ENST00000494569 RALGAPBQ86X10 1494 aa15.7■□□□□ 0.1
ZIC4-216ENST00000494569 POGZQ7Z3K3 1410 aa15.7■□□□□ 0.1
ZIC4-216ENST00000494569 CENPBP07199 599 aaPredicted RBP15.7■□□□□ 0.1
ZIC4-216ENST00000494569 NBPF8Q3BBV2 869 aa15.68■□□□□ 0.1
ZIC4-216ENST00000494569 YTHDC1Q96MU7 727 aaKnown RBP15.65■□□□□ 0.1
ZIC4-216ENST00000494569 IQGAP1P46940 1657 aa15.65■□□□□ 0.1
ZIC4-216ENST00000494569 TRPM2O94759 1503 aa15.64■□□□□ 0.09
ZIC4-216ENST00000494569 SCAPERQ9BY12 1400 aa15.64■□□□□ 0.09
ZIC4-216ENST00000494569 ARID4BQ4LE39 1312 aaPredicted RBP15.64■□□□□ 0.09
ZIC4-216ENST00000494569 FER1L4A9Z1Z3 1794 aa15.64■□□□□ 0.09
ZIC4-216ENST00000494569 SIGLEC1Q9BZZ2 1709 aa15.64■□□□□ 0.09
ZIC4-216ENST00000494569 ZNF518AQ6AHZ1 1483 aa15.63■□□□□ 0.09
ZIC4-216ENST00000494569 KIAA1210Q9ULL0 1709 aa15.63■□□□□ 0.09
ZIC4-216ENST00000494569 LMTK2Q8IWU2 1503 aa15.62■□□□□ 0.09
ZIC4-216ENST00000494569 MLH3Q9UHC1 1453 aa15.62■□□□□ 0.09
ZIC4-216ENST00000494569 SPAG9O60271 1321 aaKnown RBP15.62■□□□□ 0.09
ZIC4-216ENST00000494569 CLTCL1P53675 1640 aa15.61■□□□□ 0.09
ZIC4-216ENST00000494569 PTPRTO14522 1441 aa15.61■□□□□ 0.09
ZIC4-216ENST00000494569 AFAP1Q8N556 730 aa15.61■□□□□ 0.09
ZIC4-216ENST00000494569 PREX1Q8TCU6 1659 aa15.61■□□□□ 0.09
ZIC4-216ENST00000494569 HSPA5P11021 654 aaKnown RBP15.6■□□□□ 0.09
ZIC4-216ENST00000494569 DHX29Q7Z478 1369 aaKnown RBP15.59■□□□□ 0.09
ZIC4-216ENST00000494569 ABCA6Q8N139 1617 aa15.59■□□□□ 0.09
ZIC4-216ENST00000494569 WASHC2AQ641Q2 1341 aa15.59■□□□□ 0.09
ZIC4-216ENST00000494569 CERKQ8TCT0 537 aa15.58■□□□□ 0.09
ZIC4-216ENST00000494569 MROH2AA6NES4 1674 aa15.58■□□□□ 0.08
ZIC4-216ENST00000494569 A2MP01023 1474 aa15.58■□□□□ 0.08
ZIC4-216ENST00000494569 YEATS2Q9ULM3 1422 aa15.57■□□□□ 0.08
ZIC4-216ENST00000494569 HIRIP3Q9BW71 556 aaPredicted RBP15.56■□□□□ 0.08
ZIC4-216ENST00000494569 GPRASP1Q5JY77 1395 aa15.56■□□□□ 0.08
ZIC4-216ENST00000494569 CNTLNQ9NXG0 1405 aa15.55■□□□□ 0.08
ZIC4-216ENST00000494569 EFCAB6Q5THR3 1501 aa15.55■□□□□ 0.08
ZIC4-216ENST00000494569 CCDC144AA2RUR9 1427 aa15.55■□□□□ 0.08
ZIC4-216ENST00000494569 PRAG1Q86YV5 1406 aa15.55■□□□□ 0.08
ZIC4-216ENST00000494569 C11orf95C9JLR9 678 aaPredicted RBP15.55■□□□□ 0.08
ZIC4-216ENST00000494569 EIF4G2P78344 907 aaKnown RBP eCLIP15.55■□□□□ 0.08
ZIC4-216ENST00000494569 PIK3C2BO00750 1634 aa15.54■□□□□ 0.08
ZIC4-216ENST00000494569 REREQ9P2R6 1566 aa15.54■□□□□ 0.08
ZIC4-216ENST00000494569 DIP2CQ9Y2E4 1556 aa15.53■□□□□ 0.08
ZIC4-216ENST00000494569 DDX10Q13206 875 aaKnown RBP15.53■□□□□ 0.08
ZIC4-216ENST00000494569 HSPA2P54652 639 aa15.53■□□□□ 0.08
ZIC4-216ENST00000494569 CCDC7Q96M83 1385 aa15.52■□□□□ 0.08
ZIC4-216ENST00000494569 ZC3H13Q5T200 1668 aaKnown RBP15.52■□□□□ 0.07
ZIC4-216ENST00000494569 MYO3AQ8NEV4 1616 aa15.52■□□□□ 0.07
ZIC4-216ENST00000494569 MYOM1P52179 1685 aa15.51■□□□□ 0.07
ZIC4-216ENST00000494569 STRCQ7RTU9 1775 aa15.51■□□□□ 0.07
ZIC4-216ENST00000494569 CCER2I3L3R5 266 aa15.5■□□□□ 0.07
ZIC4-216ENST00000494569 PPLO60437 1756 aa15.49■□□□□ 0.07
ZIC4-216ENST00000494569 NRXN1Q9ULB1 1477 aa15.49■□□□□ 0.07
ZIC4-216ENST00000494569 DMRT2Q9Y5R5 561 aa15.49■□□□□ 0.07
ZIC4-216ENST00000494569 IQSEC2Q5JU85 1478 aa15.48■□□□□ 0.07
ZIC4-216ENST00000494569 KIF1BO60333 1816 aa15.47■□□□□ 0.07
ZIC4-216ENST00000494569 SETD1BQ9UPS6 1966 aaKnown RBP15.47■□□□□ 0.07
ZIC4-216ENST00000494569 USP47Q96K76 1375 aa15.47■□□□□ 0.07
ZIC4-216ENST00000494569 CAMSAP1Q5T5Y3 1602 aa15.46■□□□□ 0.07
ZIC4-216ENST00000494569 NCBP3Q53F19 620 aaKnown RBP15.45■□□□□ 0.06
ZIC4-216ENST00000494569 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms