RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 PKD2Q13563 968 aa7.98□□□□□ -1.13
PTPN12-212ENST00000494248 PTPREP23469 700 aa7.97□□□□□ -1.13
PTPN12-212ENST00000494248 PKDCCQ504Y2 493 aa7.96□□□□□ -1.14
PTPN12-212ENST00000494248 ADAM33Q9BZ11 813 aa7.96□□□□□ -1.14
PTPN12-212ENST00000494248 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.95□□□□□ -1.14
PTPN12-212ENST00000494248 ANO8Q9HCE9 1232 aaPredicted RBP7.94□□□□□ -1.14
PTPN12-212ENST00000494248 WBP1LQ9NX94 342 aa7.94□□□□□ -1.14
PTPN12-212ENST00000494248 SOWAHBA6NEL2 793 aa7.93□□□□□ -1.14
PTPN12-212ENST00000494248 FAM181BA6NEQ2 426 aa7.93□□□□□ -1.14
PTPN12-212ENST00000494248 DGAT1O75907 488 aa7.93□□□□□ -1.14
PTPN12-212ENST00000494248 PROX2Q3B8N5 592 aa7.91□□□□□ -1.14
PTPN12-212ENST00000494248 XP32Q5T750 250 aa7.91□□□□□ -1.14
PTPN12-212ENST00000494248 KRTAP9-2Q9BYQ4 174 aa7.91□□□□□ -1.14
PTPN12-212ENST00000494248 LCE2CQ5TA81 110 aa7.9□□□□□ -1.14
PTPN12-212ENST00000494248 ZDHHC16Q969W1 377 aa7.9□□□□□ -1.14
PTPN12-212ENST00000494248 JPH4Q96JJ6 628 aa7.9□□□□□ -1.14
PTPN12-212ENST00000494248 CRISPLD2Q9H0B8 497 aa7.9□□□□□ -1.14
PTPN12-212ENST00000494248 COL9A1P20849 921 aa7.89□□□□□ -1.15
PTPN12-212ENST00000494248 PPP1R18Q6NYC8 613 aa7.89□□□□□ -1.15
PTPN12-212ENST00000494248 TRIM67Q6ZTA4 783 aa7.89□□□□□ -1.15
PTPN12-212ENST00000494248 KRTAP9-6A0A140TA67 174 aa7.88□□□□□ -1.15
PTPN12-212ENST00000494248 EVI5O60447 810 aa7.87□□□□□ -1.15
PTPN12-212ENST00000494248 PPP1R15BQ5SWA1 713 aa7.87□□□□□ -1.15
PTPN12-212ENST00000494248 KRTAP1-3Q8IUG1 177 aa7.86□□□□□ -1.15
PTPN12-212ENST00000494248 RABGEF1Q9UJ41 708 aa7.86□□□□□ -1.15
PTPN12-212ENST00000494248 NCKAP5LQ9HCH0 1330 aa7.85□□□□□ -1.15
PTPN12-212ENST00000494248 PPP1R3GB7ZBB8 358 aa7.84□□□□□ -1.15
PTPN12-212ENST00000494248 PCDHGA10Q9Y5H3 936 aa7.83□□□□□ -1.16
PTPN12-212ENST00000494248 ST8SIA5O15466 376 aa7.82□□□□□ -1.16
PTPN12-212ENST00000494248 NKX1-1Q15270 411 aaPredicted RBP7.82□□□□□ -1.16
PTPN12-212ENST00000494248 HS6ST3Q8IZP7 471 aa7.82□□□□□ -1.16
PTPN12-212ENST00000494248 ZFRQ96KR1 1074 aaKnown RBP7.82□□□□□ -1.16
PTPN12-212ENST00000494248 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.81□□□□□ -1.16
PTPN12-212ENST00000494248 AAASQ9NRG9 546 aa7.81□□□□□ -1.16
PTPN12-212ENST00000494248 KIAA1468Q9P260 1216 aa7.81□□□□□ -1.16
PTPN12-212ENST00000494248 LAPTM4BQ86VI4 370 aa7.79□□□□□ -1.16
PTPN12-212ENST00000494248 SEPT9Q9UHD8 586 aaPredicted RBP7.79□□□□□ -1.16
PTPN12-212ENST00000494248 TJAP1Q5JTD0 557 aa7.78□□□□□ -1.16
PTPN12-212ENST00000494248 EMILIN3Q9NT22 766 aa7.77□□□□□ -1.17
PTPN12-212ENST00000494248 FAM187AA6NFU0 413 aa7.75□□□□□ -1.17
PTPN12-212ENST00000494248 LORP23490 312 aaPredicted RBP7.75□□□□□ -1.17
PTPN12-212ENST00000494248 MAP3K9P80192 1104 aa7.74□□□□□ -1.17
PTPN12-212ENST00000494248 PRR20EP86478 221 aa7.74□□□□□ -1.17
PTPN12-212ENST00000494248 PRR20CP86479 221 aa7.74□□□□□ -1.17
PTPN12-212ENST00000494248 PRR20DP86480 221 aa7.74□□□□□ -1.17
PTPN12-212ENST00000494248 PRR20BP86481 221 aa7.74□□□□□ -1.17
PTPN12-212ENST00000494248 PRR20AP86496 221 aa7.74□□□□□ -1.17
PTPN12-212ENST00000494248 KCTD17Q8N5Z5 321 aa7.74□□□□□ -1.17
PTPN12-212ENST00000494248 PSMG3-AS1Q96PY0 264 aa7.74□□□□□ -1.17
PTPN12-212ENST00000494248 TSR3Q9UJK0 312 aaKnown RBP7.74□□□□□ -1.17
PTPN12-212ENST00000494248 PDE4AP27815 886 aa7.73□□□□□ -1.17
PTPN12-212ENST00000494248 HPS5Q9UPZ3 1129 aa7.73□□□□□ -1.17
PTPN12-212ENST00000494248 ZSCAN1Q8NBB4 408 aa7.72□□□□□ -1.17
PTPN12-212ENST00000494248 C11orf95C9JLR9 678 aaPredicted RBP7.71□□□□□ -1.18
PTPN12-212ENST00000494248 CHGAP10645 457 aaKnown RBP7.71□□□□□ -1.18
PTPN12-212ENST00000494248 TYW1BQ6NUM6 668 aa7.71□□□□□ -1.18
PTPN12-212ENST00000494248 LARP6Q9BRS8 491 aaKnown RBP7.71□□□□□ -1.18
PTPN12-212ENST00000494248 ONECUT3O60422 494 aaPredicted RBP7.7□□□□□ -1.18
PTPN12-212ENST00000494248 PHF14O94880 888 aa7.7□□□□□ -1.18
PTPN12-212ENST00000494248 FAM98CQ17RN3 349 aaKnown RBP7.7□□□□□ -1.18
PTPN12-212ENST00000494248 C6orf132Q5T0Z8 1188 aa7.7□□□□□ -1.18
PTPN12-212ENST00000494248 DNAJC5Q9H3Z4 198 aa7.7□□□□□ -1.18
PTPN12-212ENST00000494248 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.7□□□□□ -1.18
PTPN12-212ENST00000494248 GMPR2Q9P2T1 348 aaKnown RBP7.7□□□□□ -1.18
PTPN12-212ENST00000494248 TRIM6-TRIM34B2RNG4 842 aa7.69□□□□□ -1.18
PTPN12-212ENST00000494248 FBXW7Q969H0 707 aa7.69□□□□□ -1.18
PTPN12-212ENST00000494248 DDX27Q96GQ7 796 aaKnown RBP7.69□□□□□ -1.18
PTPN12-212ENST00000494248 TERTO14746 1132 aaKnown RBP7.68□□□□□ -1.18
PTPN12-212ENST00000494248 MFSD10Q14728 455 aa7.68□□□□□ -1.18
PTPN12-212ENST00000494248 LRCH3Q96II8 777 aa7.67□□□□□ -1.18
PTPN12-212ENST00000494248 IL21Q9HBE4 155 aa7.67□□□□□ -1.18
PTPN12-212ENST00000494248 DACH1Q9UI36 760 aa7.67□□□□□ -1.18
PTPN12-212ENST00000494248 MTRQ99707 1265 aa7.66□□□□□ -1.18
PTPN12-212ENST00000494248 CRIPAKQ8N1N5 446 aa7.64□□□□□ -1.19
PTPN12-212ENST00000494248 ZNF516Q92618 1163 aa7.64□□□□□ -1.19
PTPN12-212ENST00000494248 TSKSQ9UJT2 592 aa7.64□□□□□ -1.19
PTPN12-212ENST00000494248 C3orf80F5H4A9 247 aa7.62□□□□□ -1.19
PTPN12-212ENST00000494248 PPP4CP60510 307 aa7.62□□□□□ -1.19
PTPN12-212ENST00000494248 RBM33Q96EV2 1170 aaKnown RBP7.62□□□□□ -1.19
PTPN12-212ENST00000494248 GTPBP6O43824 516 aaPredicted RBP7.61□□□□□ -1.19
PTPN12-212ENST00000494248 GGCXP38435 758 aa7.61□□□□□ -1.19
PTPN12-212ENST00000494248 NKX2-3Q8TAU0 364 aa7.61□□□□□ -1.19
PTPN12-212ENST00000494248 SLC19A1P41440 591 aa7.6□□□□□ -1.19
PTPN12-212ENST00000494248 GSK3AP49840 483 aa7.6□□□□□ -1.19
PTPN12-212ENST00000494248 LCE3BQ5TA77 95 aa7.6□□□□□ -1.19
PTPN12-212ENST00000494248 SAMD7Q7Z3H4 446 aa7.6□□□□□ -1.19
PTPN12-212ENST00000494248 CADPS2Q86UW7 1296 aa7.6□□□□□ -1.19
PTPN12-212ENST00000494248 EMID1Q96A84 441 aaPredicted RBP7.6□□□□□ -1.19
PTPN12-212ENST00000494248 EPAS1Q99814 870 aa7.6□□□□□ -1.19
PTPN12-212ENST00000494248 FAM198AQ9UFP1 575 aa7.6□□□□□ -1.19
PTPN12-212ENST00000494248 SMAPO00193 183 aa7.59□□□□□ -1.19
PTPN12-212ENST00000494248 KCNMA1Q12791 1236 aa7.59□□□□□ -1.19
PTPN12-212ENST00000494248 ZNF598Q86UK7 904 aaKnown RBP7.59□□□□□ -1.19
PTPN12-212ENST00000494248 TSR1Q2NL82 804 aaKnown RBP7.58□□□□□ -1.2
PTPN12-212ENST00000494248 SPRYD7Q5W111 196 aa7.58□□□□□ -1.2
PTPN12-212ENST00000494248 TMUB1Q9BVT8 246 aa7.58□□□□□ -1.2
PTPN12-212ENST00000494248 RYDENQ9NUL5 291 aaKnown RBP7.58□□□□□ -1.2
PTPN12-212ENST00000494248 TNFRSF10AO00220 468 aa7.57□□□□□ -1.2
PTPN12-212ENST00000494248 GDF9O60383 454 aa7.57□□□□□ -1.2
PTPN12-212ENST00000494248 DDX12PQ92771 950 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms