RNA–Protein interactions for RNA: ENST00000493726.1

LRCH3-218, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 733 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-218ENST00000493726 CEP164Q9UPV0 1460 aa14.05□□□□□ -0.16
LRCH3-218ENST00000493726 LSM11P83369 360 aaKnown RBP eCLIP14.04□□□□□ -0.16
LRCH3-218ENST00000493726 PSDA5PKW4 1024 aaPredicted RBP14.03□□□□□ -0.16
LRCH3-218ENST00000493726 PBX2P40425 430 aa14.02□□□□□ -0.17
LRCH3-218ENST00000493726 EVI5O60447 810 aa14.01□□□□□ -0.17
LRCH3-218ENST00000493726 MAP3K9P80192 1104 aa14.01□□□□□ -0.17
LRCH3-218ENST00000493726 PPP4R3BQ5MIZ7 849 aa14□□□□□ -0.17
LRCH3-218ENST00000493726 PSEN2P49810 448 aa13.99□□□□□ -0.17
LRCH3-218ENST00000493726 ZNF454Q8N9F8 522 aa13.99□□□□□ -0.17
LRCH3-218ENST00000493726 ARHGAP33O14559 1287 aa13.98□□□□□ -0.17
LRCH3-218ENST00000493726 URB2Q14146 1524 aaKnown RBP13.96□□□□□ -0.17
LRCH3-218ENST00000493726 DMRTA1Q5VZB9 504 aa13.96□□□□□ -0.17
LRCH3-218ENST00000493726 MYT1LQ9UL68 1186 aa13.95□□□□□ -0.18
LRCH3-218ENST00000493726 RNF166Q96A37 237 aaPredicted RBP13.94□□□□□ -0.18
LRCH3-218ENST00000493726 ANO8Q9HCE9 1232 aaPredicted RBP13.94□□□□□ -0.18
LRCH3-218ENST00000493726 FOSBP53539 338 aa13.92□□□□□ -0.18
LRCH3-218ENST00000493726 CAMK2BQ13554 666 aa13.92□□□□□ -0.18
LRCH3-218ENST00000493726 KCNK17Q96T54 332 aa13.92□□□□□ -0.18
LRCH3-218ENST00000493726 DPYSL4O14531 572 aa13.91□□□□□ -0.18
LRCH3-218ENST00000493726 ADGRD1Q6QNK2 874 aa13.89□□□□□ -0.19
LRCH3-218ENST00000493726 JPH4Q96JJ6 628 aa13.88□□□□□ -0.19
LRCH3-218ENST00000493726 ABCC8Q09428 1581 aa13.86□□□□□ -0.19
LRCH3-218ENST00000493726 PTGER2P43116 358 aa13.85□□□□□ -0.19
LRCH3-218ENST00000493726 ADAM33Q9BZ11 813 aa13.85□□□□□ -0.19
LRCH3-218ENST00000493726 BCL2L12Q9HB09 334 aa13.84□□□□□ -0.19
LRCH3-218ENST00000493726 TOPBP1Q92547 1522 aa13.84□□□□□ -0.19
LRCH3-218ENST00000493726 ZDHHC16Q969W1 377 aa13.83□□□□□ -0.2
LRCH3-218ENST00000493726 PCDHGA10Q9Y5H3 936 aa13.83□□□□□ -0.2
LRCH3-218ENST00000493726 DNMBPQ6XZF7 1577 aa13.83□□□□□ -0.2
LRCH3-218ENST00000493726 KCNH8Q96L42 1107 aa13.82□□□□□ -0.2
LRCH3-218ENST00000493726 TSHZ2Q9NRE2 1034 aa13.81□□□□□ -0.2
LRCH3-218ENST00000493726 PTPREP23469 700 aa13.8□□□□□ -0.2
LRCH3-218ENST00000493726 WDR70Q9NW82 654 aa13.8□□□□□ -0.2
LRCH3-218ENST00000493726 IFT140Q96RY7 1462 aa13.8□□□□□ -0.2
LRCH3-218ENST00000493726 TK2O00142 265 aa13.79□□□□□ -0.2
LRCH3-218ENST00000493726 HRO43593 1189 aa13.78□□□□□ -0.2
LRCH3-218ENST00000493726 E2F4Q16254 413 aa13.78□□□□□ -0.2
LRCH3-218ENST00000493726 TARBP1Q13395 1621 aaKnown RBP13.76□□□□□ -0.21
LRCH3-218ENST00000493726 DDX12PQ92771 950 aa13.76□□□□□ -0.21
LRCH3-218ENST00000493726 PHF14O94880 888 aa13.75□□□□□ -0.21
LRCH3-218ENST00000493726 VPS9D1Q9Y2B5 631 aa13.75□□□□□ -0.21
LRCH3-218ENST00000493726 TYW1BQ6NUM6 668 aa13.73□□□□□ -0.21
LRCH3-218ENST00000493726 ZBED2Q9BTP6 218 aa13.72□□□□□ -0.21
LRCH3-218ENST00000493726 ZNF608Q9ULD9 1512 aaPredicted RBP13.72□□□□□ -0.21
LRCH3-218ENST00000493726 POLA1P09884 1462 aaPredicted RBP13.72□□□□□ -0.21
LRCH3-218ENST00000493726 PDIA6Q15084 440 aa13.71□□□□□ -0.21
LRCH3-218ENST00000493726 COL9A1P20849 921 aa13.7□□□□□ -0.22
LRCH3-218ENST00000493726 RBM33Q96EV2 1170 aaKnown RBP13.7□□□□□ -0.22
LRCH3-218ENST00000493726 WDR97A6NE52 1622 aa13.69□□□□□ -0.22
LRCH3-218ENST00000493726 STAC3Q96MF2 364 aa13.69□□□□□ -0.22
LRCH3-218ENST00000493726 CUX1P39880 1505 aa13.69□□□□□ -0.22
LRCH3-218ENST00000493726 EIF4G3O43432 1585 aaKnown RBP13.68□□□□□ -0.22
LRCH3-218ENST00000493726 FBXW7Q969H0 707 aa13.68□□□□□ -0.22
LRCH3-218ENST00000493726 SLC4A5Q9BY07 1137 aa13.67□□□□□ -0.22
LRCH3-218ENST00000493726 NBR1Q14596 966 aa13.66□□□□□ -0.22
LRCH3-218ENST00000493726 PROX2Q3B8N5 592 aa13.66□□□□□ -0.22
LRCH3-218ENST00000493726 KCTD12Q96CX2 325 aaKnown RBP13.66□□□□□ -0.22
LRCH3-218ENST00000493726 EPAS1Q99814 870 aa13.66□□□□□ -0.22
LRCH3-218ENST00000493726 PPP1R3GB7ZBB8 358 aa13.65□□□□□ -0.22
LRCH3-218ENST00000493726 C6orf132Q5T0Z8 1188 aa13.64□□□□□ -0.23
LRCH3-218ENST00000493726 SPDYE16A6NNV3 312 aaPredicted RBP13.63□□□□□ -0.23
LRCH3-218ENST00000493726 BHMG1C9JSJ3 638 aaPredicted RBP13.63□□□□□ -0.23
LRCH3-218ENST00000493726 FGD5Q6ZNL6 1462 aa13.62□□□□□ -0.23
LRCH3-218ENST00000493726 GRXCR2A6NFK2 248 aa13.62□□□□□ -0.23
LRCH3-218ENST00000493726 SUPT5HO00267 1087 aaKnown RBP13.61□□□□□ -0.23
LRCH3-218ENST00000493726 ARIH1Q9Y4X5 557 aaPredicted RBP13.61□□□□□ -0.23
LRCH3-218ENST00000493726 SOGA1O94964 1423 aa13.6□□□□□ -0.23
LRCH3-218ENST00000493726 TSR1Q2NL82 804 aaKnown RBP13.6□□□□□ -0.23
LRCH3-218ENST00000493726 RAD54L2Q9Y4B4 1467 aa13.6□□□□□ -0.23
LRCH3-218ENST00000493726 PRIM1P49642 420 aaKnown RBP13.59□□□□□ -0.23
LRCH3-218ENST00000493726 AQRO60306 1485 aaKnown RBP eCLIP13.59□□□□□ -0.23
LRCH3-218ENST00000493726 MAP3K7O43318 606 aa13.58□□□□□ -0.24
LRCH3-218ENST00000493726 PLCB2Q00722 1185 aa13.58□□□□□ -0.24
LRCH3-218ENST00000493726 EN1Q05925 392 aaPredicted RBP13.58□□□□□ -0.24
LRCH3-218ENST00000493726 MRPL50Q8N5N7 158 aaKnown RBP13.57□□□□□ -0.24
LRCH3-218ENST00000493726 HCSTQ9UBK5 93 aa13.57□□□□□ -0.24
LRCH3-218ENST00000493726 BIVM-ERCC5R4GMW8 1640 aa13.57□□□□□ -0.24
LRCH3-218ENST00000493726 KCNV2Q8TDN2 545 aa13.56□□□□□ -0.24
LRCH3-218ENST00000493726 ABCA10Q8WWZ4 1543 aa13.55□□□□□ -0.24
LRCH3-218ENST00000493726 TOP2BQ02880 1626 aa13.55□□□□□ -0.24
LRCH3-218ENST00000493726 RIMBP3CA6NJZ7 1639 aa13.54□□□□□ -0.24
LRCH3-218ENST00000493726 RIMBP3BA6NNM3 1639 aa13.54□□□□□ -0.24
LRCH3-218ENST00000493726 RIMBP3Q9UFD9 1639 aa13.54□□□□□ -0.24
LRCH3-218ENST00000493726 PTPN5P54829 565 aa13.54□□□□□ -0.24
LRCH3-218ENST00000493726 GOLGA8CPA6NN73 597 aa13.53□□□□□ -0.24
LRCH3-218ENST00000493726 NBPF3Q9H094 633 aa13.53□□□□□ -0.24
LRCH3-218ENST00000493726 KIAA1468Q9P260 1216 aa13.53□□□□□ -0.24
LRCH3-218ENST00000493726 RABGEF1Q9UJ41 708 aa13.53□□□□□ -0.24
LRCH3-218ENST00000493726 ABCA5Q8WWZ7 1642 aa13.53□□□□□ -0.24
LRCH3-218ENST00000493726 MAGI1Q96QZ7 1491 aaPredicted RBP13.52□□□□□ -0.25
LRCH3-218ENST00000493726 TDRD9Q8NDG6 1382 aaKnown RBP13.51□□□□□ -0.25
LRCH3-218ENST00000493726 WNT2BQ93097 391 aa13.51□□□□□ -0.25
LRCH3-218ENST00000493726 CHD1O14646 1710 aa13.5□□□□□ -0.25
LRCH3-218ENST00000493726 GRIN2BQ13224 1484 aa13.5□□□□□ -0.25
LRCH3-218ENST00000493726 OSBPP22059 807 aa13.5□□□□□ -0.25
LRCH3-218ENST00000493726 SYNJ1O43426 1573 aa13.49□□□□□ -0.25
LRCH3-218ENST00000493726 WRNQ14191 1432 aaPredicted RBP eCLIP13.49□□□□□ -0.25
LRCH3-218ENST00000493726 SEPT9Q9UHD8 586 aaPredicted RBP13.49□□□□□ -0.25
LRCH3-218ENST00000493726 TRIM6-TRIM34B2RNG4 842 aa13.48□□□□□ -0.25
LRCH3-218ENST00000493726 THSD4Q6ZMP0 1018 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms