RNA–Protein interactions for RNA: ENST00000493377.1

SYCP1-208, Transcript of synaptonemal complex protein 1, humanhuman

TSL 3

Gene SYCP1, Length 783 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-208ENST00000493377 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.27□□□□□ -0.45
SYCP1-208ENST00000493377 EVI5O60447 810 aa12.26□□□□□ -0.45
SYCP1-208ENST00000493377 COL9A1P20849 921 aa12.26□□□□□ -0.45
SYCP1-208ENST00000493377 PPP1R18Q6NYC8 613 aa12.26□□□□□ -0.45
SYCP1-208ENST00000493377 TREML4Q6UXN2 200 aa12.26□□□□□ -0.45
SYCP1-208ENST00000493377 LRCH3Q96II8 777 aa12.26□□□□□ -0.45
SYCP1-208ENST00000493377 KIAA1468Q9P260 1216 aa12.26□□□□□ -0.45
SYCP1-208ENST00000493377 LOC100996750A0A140TA64 210 aa12.24□□□□□ -0.45
SYCP1-208ENST00000493377 TJAP1Q5JTD0 557 aa12.24□□□□□ -0.45
SYCP1-208ENST00000493377 LCE2AQ5TA79 106 aaPredicted RBP12.24□□□□□ -0.45
SYCP1-208ENST00000493377 KRTAP4-6Q9BYQ5 205 aa12.24□□□□□ -0.45
SYCP1-208ENST00000493377 FAM98CQ17RN3 349 aaKnown RBP12.23□□□□□ -0.45
SYCP1-208ENST00000493377 SEPT9Q9UHD8 586 aaPredicted RBP12.21□□□□□ -0.45
SYCP1-208ENST00000493377 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.2□□□□□ -0.46
SYCP1-208ENST00000493377 STK17AQ9UEE5 414 aa12.2□□□□□ -0.46
SYCP1-208ENST00000493377 PPP1R15BQ5SWA1 713 aa12.19□□□□□ -0.46
SYCP1-208ENST00000493377 IL21Q9HBE4 155 aa12.17□□□□□ -0.46
SYCP1-208ENST00000493377 FBXW7Q969H0 707 aa12.16□□□□□ -0.46
SYCP1-208ENST00000493377 PCDHGA10Q9Y5H3 936 aa12.16□□□□□ -0.46
SYCP1-208ENST00000493377 MYT1Q01538 1121 aa12.15□□□□□ -0.46
SYCP1-208ENST00000493377 POTECB2RU33 542 aa12.14□□□□□ -0.47
SYCP1-208ENST00000493377 PKDCCQ504Y2 493 aa12.14□□□□□ -0.47
SYCP1-208ENST00000493377 CRISPLD2Q9H0B8 497 aa12.14□□□□□ -0.47
SYCP1-208ENST00000493377 PPP4CP60510 307 aa12.13□□□□□ -0.47
SYCP1-208ENST00000493377 DGAT1O75907 488 aa12.12□□□□□ -0.47
SYCP1-208ENST00000493377 MTRQ99707 1265 aa12.12□□□□□ -0.47
SYCP1-208ENST00000493377 TYW1BQ6NUM6 668 aa12.11□□□□□ -0.47
SYCP1-208ENST00000493377 TRIM6-TRIM34B2RNG4 842 aa12.1□□□□□ -0.47
SYCP1-208ENST00000493377 ECM2O94769 699 aaPredicted RBP12.08□□□□□ -0.48
SYCP1-208ENST00000493377 GGCXP38435 758 aa12.08□□□□□ -0.48
SYCP1-208ENST00000493377 TRIM67Q6ZTA4 783 aa12.06□□□□□ -0.48
SYCP1-208ENST00000493377 PHF14O94880 888 aa12.05□□□□□ -0.48
SYCP1-208ENST00000493377 MAP3K9P80192 1104 aa12.05□□□□□ -0.48
SYCP1-208ENST00000493377 INSM1Q01101 510 aaPredicted RBP12.02□□□□□ -0.49
SYCP1-208ENST00000493377 TMUB1Q9BVT8 246 aa12.02□□□□□ -0.49
SYCP1-208ENST00000493377 RGL2O15211 777 aa12□□□□□ -0.49
SYCP1-208ENST00000493377 ZNF516Q92618 1163 aa12□□□□□ -0.49
SYCP1-208ENST00000493377 WFS1O76024 890 aa11.99□□□□□ -0.49
SYCP1-208ENST00000493377 PRR20EP86478 221 aa11.99□□□□□ -0.49
SYCP1-208ENST00000493377 PRR20CP86479 221 aa11.99□□□□□ -0.49
SYCP1-208ENST00000493377 PRR20DP86480 221 aa11.99□□□□□ -0.49
SYCP1-208ENST00000493377 PRR20BP86481 221 aa11.99□□□□□ -0.49
SYCP1-208ENST00000493377 PRR20AP86496 221 aa11.99□□□□□ -0.49
SYCP1-208ENST00000493377 C6orf132Q5T0Z8 1188 aa11.99□□□□□ -0.49
SYCP1-208ENST00000493377 WIPF1O43516 503 aa11.98□□□□□ -0.49
SYCP1-208ENST00000493377 PDE4AP27815 886 aa11.97□□□□□ -0.49
SYCP1-208ENST00000493377 PACS2Q86VP3 889 aa11.94□□□□□ -0.5
SYCP1-208ENST00000493377 EPAS1Q99814 870 aa11.94□□□□□ -0.5
SYCP1-208ENST00000493377 NKX2-3Q8TAU0 364 aa11.93□□□□□ -0.5
SYCP1-208ENST00000493377 NCKAP5LQ9HCH0 1330 aa11.92□□□□□ -0.5
SYCP1-208ENST00000493377 SAMD7Q7Z3H4 446 aa11.92□□□□□ -0.5
SYCP1-208ENST00000493377 FAM187AA6NFU0 413 aa11.91□□□□□ -0.5
SYCP1-208ENST00000493377 SLC19A1P41440 591 aa11.91□□□□□ -0.5
SYCP1-208ENST00000493377 ZNF598Q86UK7 904 aaKnown RBP11.88□□□□□ -0.51
SYCP1-208ENST00000493377 AAASQ9NRG9 546 aa11.88□□□□□ -0.51
SYCP1-208ENST00000493377 SPRYD7Q5W111 196 aa11.87□□□□□ -0.51
SYCP1-208ENST00000493377 DDX27Q96GQ7 796 aaKnown RBP11.86□□□□□ -0.51
SYCP1-208ENST00000493377 TSKSQ9UJT2 592 aa11.86□□□□□ -0.51
SYCP1-208ENST00000493377 ST8SIA5O15466 376 aa11.85□□□□□ -0.51
SYCP1-208ENST00000493377 NFX1Q12986 1120 aaKnown RBP11.85□□□□□ -0.51
SYCP1-208ENST00000493377 APLP1P51693 650 aa11.84□□□□□ -0.51
SYCP1-208ENST00000493377 HS6ST3Q8IZP7 471 aa11.84□□□□□ -0.51
SYCP1-208ENST00000493377 EMILIN3Q9NT22 766 aa11.84□□□□□ -0.51
SYCP1-208ENST00000493377 RYDENQ9NUL5 291 aaKnown RBP11.84□□□□□ -0.51
SYCP1-208ENST00000493377 EMID1Q96A84 441 aaPredicted RBP11.82□□□□□ -0.52
SYCP1-208ENST00000493377 NECTIN2Q92692 538 aa11.81□□□□□ -0.52
SYCP1-208ENST00000493377 RNF223E7ERA6 249 aa11.79□□□□□ -0.52
SYCP1-208ENST00000493377 LARP6Q9BRS8 491 aaKnown RBP11.79□□□□□ -0.52
SYCP1-208ENST00000493377 GDF9O60383 454 aa11.78□□□□□ -0.52
SYCP1-208ENST00000493377 PKD2Q13563 968 aa11.78□□□□□ -0.52
SYCP1-208ENST00000493377 MFSD10Q14728 455 aa11.78□□□□□ -0.52
SYCP1-208ENST00000493377 ZNF697Q5TEC3 545 aa11.78□□□□□ -0.52
SYCP1-208ENST00000493377 CRIPAKQ8N1N5 446 aa11.78□□□□□ -0.52
SYCP1-208ENST00000493377 COPS2P61201 443 aa11.77□□□□□ -0.53
SYCP1-208ENST00000493377 RBM33Q96EV2 1170 aaKnown RBP11.77□□□□□ -0.53
SYCP1-208ENST00000493377 FAM181BA6NEQ2 426 aa11.76□□□□□ -0.53
SYCP1-208ENST00000493377 ZPR1O75312 459 aa11.76□□□□□ -0.53
SYCP1-208ENST00000493377 TNFRSF10AO00220 468 aa11.75□□□□□ -0.53
SYCP1-208ENST00000493377 SMAPO00193 183 aa11.74□□□□□ -0.53
SYCP1-208ENST00000493377 RNF40O75150 1001 aa11.74□□□□□ -0.53
SYCP1-208ENST00000493377 C11orf95C9JLR9 678 aaPredicted RBP11.73□□□□□ -0.53
SYCP1-208ENST00000493377 HDGFP51858 240 aaKnown RBP11.73□□□□□ -0.53
SYCP1-208ENST00000493377 ANKLE1Q8NAG6 615 aa11.73□□□□□ -0.53
SYCP1-208ENST00000493377 SUZ12Q15022 739 aaKnown RBP11.72□□□□□ -0.53
SYCP1-208ENST00000493377 NBPF26B4DH59 902 aa11.7□□□□□ -0.54
SYCP1-208ENST00000493377 GMPR2Q9P2T1 348 aaKnown RBP11.7□□□□□ -0.54
SYCP1-208ENST00000493377 CDCA7LQ96GN5 454 aa11.69□□□□□ -0.54
SYCP1-208ENST00000493377 EN1Q05925 392 aaPredicted RBP11.67□□□□□ -0.54
SYCP1-208ENST00000493377 LIAT1Q6ZQX7 453 aa11.67□□□□□ -0.54
SYCP1-208ENST00000493377 TATDN2Q93075 761 aa11.67□□□□□ -0.54
SYCP1-208ENST00000493377 DNAJC5Q9H3Z4 198 aa11.67□□□□□ -0.54
SYCP1-208ENST00000493377 PRSS12P56730 875 aa11.66□□□□□ -0.54
SYCP1-208ENST00000493377 LMOD2Q6P5Q4 547 aa11.66□□□□□ -0.54
SYCP1-208ENST00000493377 DACH1Q9UI36 760 aa11.66□□□□□ -0.54
SYCP1-208ENST00000493377 PNMA3Q9UL41 463 aa11.65□□□□□ -0.54
SYCP1-208ENST00000493377 AVPP01185 164 aa11.64□□□□□ -0.55
SYCP1-208ENST00000493377 TSR1Q2NL82 804 aaKnown RBP11.64□□□□□ -0.55
SYCP1-208ENST00000493377 LCE2CQ5TA81 110 aa11.64□□□□□ -0.55
SYCP1-208ENST00000493377 MAP3K7O43318 606 aa11.63□□□□□ -0.55
SYCP1-208ENST00000493377 FAM198AQ9UFP1 575 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms