RNA–Protein interactions for RNA: ENST00000491919.5

CHEK2-224, Transcript of checkpoint kinase 2, humanhuman

TSL 3

Gene CHEK2, Length 609 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-224ENST00000491919 CEP164Q9UPV0 1460 aa11.04□□□□□ -0.64
CHEK2-224ENST00000491919 CADPSQ9ULU8 1353 aa11.03□□□□□ -0.64
CHEK2-224ENST00000491919 EMILIN3Q9NT22 766 aa11.03□□□□□ -0.64
CHEK2-224ENST00000491919 RYDENQ9NUL5 291 aaKnown RBP11.03□□□□□ -0.64
CHEK2-224ENST00000491919 ZNF454Q8N9F8 522 aa11.02□□□□□ -0.65
CHEK2-224ENST00000491919 BCL2L12Q9HB09 334 aa11.02□□□□□ -0.65
CHEK2-224ENST00000491919 VPS9D1Q9Y2B5 631 aa11.02□□□□□ -0.65
CHEK2-224ENST00000491919 PDE4AP27815 886 aa11□□□□□ -0.65
CHEK2-224ENST00000491919 LARP6Q9BRS8 491 aaKnown RBP11□□□□□ -0.65
CHEK2-224ENST00000491919 ZNF608Q9ULD9 1512 aaPredicted RBP10.99□□□□□ -0.65
CHEK2-224ENST00000491919 HCSTQ9UBK5 93 aa10.98□□□□□ -0.65
CHEK2-224ENST00000491919 EVI5O60447 810 aa10.97□□□□□ -0.65
CHEK2-224ENST00000491919 DDX27Q96GQ7 796 aaKnown RBP10.97□□□□□ -0.65
CHEK2-224ENST00000491919 ADAM33Q9BZ11 813 aa10.97□□□□□ -0.65
CHEK2-224ENST00000491919 FANCD2Q9BXW9 1451 aa10.97□□□□□ -0.65
CHEK2-224ENST00000491919 URB2Q14146 1524 aaKnown RBP10.97□□□□□ -0.65
CHEK2-224ENST00000491919 PEG3Q9GZU2 1588 aa10.97□□□□□ -0.65
CHEK2-224ENST00000491919 CHD1O14646 1710 aa10.96□□□□□ -0.65
CHEK2-224ENST00000491919 BHMG1C9JSJ3 638 aaPredicted RBP10.96□□□□□ -0.65
CHEK2-224ENST00000491919 KCTD12Q96CX2 325 aaKnown RBP10.96□□□□□ -0.65
CHEK2-224ENST00000491919 PLA2G2EQ9NZK7 142 aa10.96□□□□□ -0.65
CHEK2-224ENST00000491919 JPH4Q96JJ6 628 aa10.95□□□□□ -0.66
CHEK2-224ENST00000491919 ZBED2Q9BTP6 218 aa10.95□□□□□ -0.66
CHEK2-224ENST00000491919 SLC4A5Q9BY07 1137 aa10.94□□□□□ -0.66
CHEK2-224ENST00000491919 PCDHGA10Q9Y5H3 936 aa10.9□□□□□ -0.66
CHEK2-224ENST00000491919 ZDHHC16Q969W1 377 aa10.89□□□□□ -0.67
CHEK2-224ENST00000491919 PTPREP23469 700 aa10.88□□□□□ -0.67
CHEK2-224ENST00000491919 MROH2BQ7Z745 1585 aa10.88□□□□□ -0.67
CHEK2-224ENST00000491919 EIF4G3O43432 1585 aaKnown RBP10.87□□□□□ -0.67
CHEK2-224ENST00000491919 RSF1Q96T23 1441 aaPredicted RBP10.87□□□□□ -0.67
CHEK2-224ENST00000491919 COL9A1P20849 921 aa10.87□□□□□ -0.67
CHEK2-224ENST00000491919 CAMK2BQ13554 666 aa10.87□□□□□ -0.67
CHEK2-224ENST00000491919 MAP3K9P80192 1104 aa10.85□□□□□ -0.67
CHEK2-224ENST00000491919 PROX2Q3B8N5 592 aa10.84□□□□□ -0.67
CHEK2-224ENST00000491919 THSD4Q6ZMP0 1018 aa10.84□□□□□ -0.67
CHEK2-224ENST00000491919 KCNH8Q96L42 1107 aa10.84□□□□□ -0.67
CHEK2-224ENST00000491919 PTPN5P54829 565 aa10.82□□□□□ -0.68
CHEK2-224ENST00000491919 IFT140Q96RY7 1462 aa10.81□□□□□ -0.68
CHEK2-224ENST00000491919 PPP1R3GB7ZBB8 358 aa10.8□□□□□ -0.68
CHEK2-224ENST00000491919 DPYSL4O14531 572 aa10.79□□□□□ -0.68
CHEK2-224ENST00000491919 PHF14O94880 888 aa10.77□□□□□ -0.69
CHEK2-224ENST00000491919 AQRO60306 1485 aaKnown RBP eCLIP10.76□□□□□ -0.69
CHEK2-224ENST00000491919 CFTRP13569 1480 aa10.76□□□□□ -0.69
CHEK2-224ENST00000491919 CLASP1Q7Z460 1538 aa10.76□□□□□ -0.69
CHEK2-224ENST00000491919 MRPL50Q8N5N7 158 aaKnown RBP10.76□□□□□ -0.69
CHEK2-224ENST00000491919 WNT2BQ93097 391 aa10.76□□□□□ -0.69
CHEK2-224ENST00000491919 STAC3Q96MF2 364 aa10.76□□□□□ -0.69
CHEK2-224ENST00000491919 TYW1BQ6NUM6 668 aa10.75□□□□□ -0.69
CHEK2-224ENST00000491919 RABGEF1Q9UJ41 708 aa10.74□□□□□ -0.69
CHEK2-224ENST00000491919 WIZO95785 1651 aa10.73□□□□□ -0.69
CHEK2-224ENST00000491919 FBXW7Q969H0 707 aa10.72□□□□□ -0.69
CHEK2-224ENST00000491919 KIF13AQ9H1H9 1805 aa10.72□□□□□ -0.69
CHEK2-224ENST00000491919 C6orf132Q5T0Z8 1188 aa10.71□□□□□ -0.69
CHEK2-224ENST00000491919 IFFO2Q5TF58 517 aa10.71□□□□□ -0.69
CHEK2-224ENST00000491919 BBXQ8WY36 941 aaPredicted RBP10.71□□□□□ -0.69
CHEK2-224ENST00000491919 NBPF3Q9H094 633 aa10.71□□□□□ -0.69
CHEK2-224ENST00000491919 PRIM1P49642 420 aaKnown RBP10.7□□□□□ -0.7
CHEK2-224ENST00000491919 GAPVD1Q14C86 1478 aa10.69□□□□□ -0.7
CHEK2-224ENST00000491919 BCAMP50895 628 aa10.69□□□□□ -0.7
CHEK2-224ENST00000491919 DDX12PQ92771 950 aa10.69□□□□□ -0.7
CHEK2-224ENST00000491919 TOPBP1Q92547 1522 aa10.68□□□□□ -0.7
CHEK2-224ENST00000491919 KIAA1468Q9P260 1216 aa10.68□□□□□ -0.7
CHEK2-224ENST00000491919 HECW2Q9P2P5 1572 aa10.68□□□□□ -0.7
CHEK2-224ENST00000491919 EPAS1Q99814 870 aa10.67□□□□□ -0.7
CHEK2-224ENST00000491919 TARBP1Q13395 1621 aaKnown RBP10.66□□□□□ -0.7
CHEK2-224ENST00000491919 PDIA6Q15084 440 aa10.66□□□□□ -0.7
CHEK2-224ENST00000491919 RBM33Q96EV2 1170 aaKnown RBP10.66□□□□□ -0.7
CHEK2-224ENST00000491919 SEPT9Q9UHD8 586 aaPredicted RBP10.66□□□□□ -0.7
CHEK2-224ENST00000491919 A0A0G2JS52 829 aa10.65□□□□□ -0.7
CHEK2-224ENST00000491919 GOLGA8CPA6NN73 597 aa10.65□□□□□ -0.7
CHEK2-224ENST00000491919 TSR1Q2NL82 804 aaKnown RBP10.65□□□□□ -0.7
CHEK2-224ENST00000491919 ERCC6L2Q5T890 1561 aa10.65□□□□□ -0.71
CHEK2-224ENST00000491919 LMTK3Q96Q04 1460 aa10.64□□□□□ -0.71
CHEK2-224ENST00000491919 ZFRQ96KR1 1074 aaKnown RBP10.64□□□□□ -0.71
CHEK2-224ENST00000491919 PRDM2Q13029 1718 aa10.64□□□□□ -0.71
CHEK2-224ENST00000491919 SOWAHBA6NEL2 793 aa10.63□□□□□ -0.71
CHEK2-224ENST00000491919 TRIM6-TRIM34B2RNG4 842 aa10.63□□□□□ -0.71
CHEK2-224ENST00000491919 C3orf80F5H4A9 247 aa10.63□□□□□ -0.71
CHEK2-224ENST00000491919 TSKSQ9UJT2 592 aa10.63□□□□□ -0.71
CHEK2-224ENST00000491919 SYNJ1O43426 1573 aa10.63□□□□□ -0.71
CHEK2-224ENST00000491919 SNAPC4Q5SXM2 1469 aa10.62□□□□□ -0.71
CHEK2-224ENST00000491919 EN1Q05925 392 aaPredicted RBP10.62□□□□□ -0.71
CHEK2-224ENST00000491919 LAPTM4BQ86VI4 370 aa10.62□□□□□ -0.71
CHEK2-224ENST00000491919 FBXO41Q8TF61 875 aa10.62□□□□□ -0.71
CHEK2-224ENST00000491919 FAM198AQ9UFP1 575 aa10.62□□□□□ -0.71
CHEK2-224ENST00000491919 ONECUT3O60422 494 aaPredicted RBP10.61□□□□□ -0.71
CHEK2-224ENST00000491919 ITGBL1O95965 494 aaPredicted RBP10.61□□□□□ -0.71
CHEK2-224ENST00000491919 ANKK1Q8NFD2 765 aa10.61□□□□□ -0.71
CHEK2-224ENST00000491919 WBP1LQ9NX94 342 aa10.61□□□□□ -0.71
CHEK2-224ENST00000491919 RTN4Q9NQC3 1192 aaKnown RBP10.6□□□□□ -0.71
CHEK2-224ENST00000491919 NBR1Q14596 966 aa10.59□□□□□ -0.71
CHEK2-224ENST00000491919 ILDR2Q71H61 639 aa10.59□□□□□ -0.71
CHEK2-224ENST00000491919 TDRD9Q8NDG6 1382 aaKnown RBP10.57□□□□□ -0.72
CHEK2-224ENST00000491919 SPRYD3Q8NCJ5 442 aa10.57□□□□□ -0.72
CHEK2-224ENST00000491919 KDM6BO15054 1643 aa10.57□□□□□ -0.72
CHEK2-224ENST00000491919 RAD54L2Q9Y4B4 1467 aa10.56□□□□□ -0.72
CHEK2-224ENST00000491919 FAM98CQ17RN3 349 aaKnown RBP10.56□□□□□ -0.72
CHEK2-224ENST00000491919 ARIH1Q9Y4X5 557 aaPredicted RBP10.56□□□□□ -0.72
CHEK2-224ENST00000491919 DNMBPQ6XZF7 1577 aa10.56□□□□□ -0.72
CHEK2-224ENST00000491919 CHMP7Q8WUX9 453 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms