RNA–Protein interactions for RNA: ENST00000491847.1

CISH-203, Transcript of cytokine inducible SH2 containing protein, humanhuman

TSL 1 (best)

Gene CISH, Length 5,042 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CISH-203ENST00000491847 TERF2IPQ9NYB0 399 aa16.19■□□□□ 0.18
CISH-203ENST00000491847 HMGXB3Q12766 1538 aa16.19■□□□□ 0.18
CISH-203ENST00000491847 SMC4Q9NTJ3 1288 aa16.19■□□□□ 0.18
CISH-203ENST00000491847 HTATSF1O43719 755 aaKnown RBP16.19■□□□□ 0.18
CISH-203ENST00000491847 SOX12O15370 315 aa16.18■□□□□ 0.18
CISH-203ENST00000491847 CENPJQ9HC77 1338 aaPredicted RBP16.18■□□□□ 0.18
CISH-203ENST00000491847 CHMP4AQ9BY43 222 aa16.17■□□□□ 0.18
CISH-203ENST00000491847 AQRO60306 1485 aaKnown RBP eCLIP16.17■□□□□ 0.181e-8■■■■■ 45.6
CISH-203ENST00000491847 MRC2Q9UBG0 1479 aa16.17■□□□□ 0.18
CISH-203ENST00000491847 FAM161AQ3B820 660 aa16.17■□□□□ 0.18
CISH-203ENST00000491847 CENPQQ7L2Z9 268 aaPredicted RBP16.16■□□□□ 0.18
CISH-203ENST00000491847 CCDC144AA2RUR9 1427 aa16.16■□□□□ 0.18
CISH-203ENST00000491847 DDX11L8A8MPP1 907 aa16.16■□□□□ 0.18
CISH-203ENST00000491847 MYOM3Q5VTT5 1437 aa16.15■□□□□ 0.18
CISH-203ENST00000491847 GNL2Q13823 731 aaKnown RBP16.15■□□□□ 0.18
CISH-203ENST00000491847 SLC4A3P48751 1232 aa16.15■□□□□ 0.18
CISH-203ENST00000491847 DHX57Q6P158 1386 aaKnown RBP16.14■□□□□ 0.17
CISH-203ENST00000491847 FOXD4L1Q9NU39 408 aa16.14■□□□□ 0.17
CISH-203ENST00000491847 IFT140Q96RY7 1462 aa16.14■□□□□ 0.17
CISH-203ENST00000491847 VGFO15240 615 aaPredicted RBP16.14■□□□□ 0.17
CISH-203ENST00000491847 PRKRIP1Q9H875 184 aaPredicted RBP16.14■□□□□ 0.17
CISH-203ENST00000491847 ZBED9Q6R2W3 1325 aa16.14■□□□□ 0.17
CISH-203ENST00000491847 PHLDB1Q86UU1 1377 aa16.13■□□□□ 0.17
CISH-203ENST00000491847 NPHP1O15259 732 aa16.13■□□□□ 0.17
CISH-203ENST00000491847 TNNT3P45378 269 aaPredicted RBP16.13■□□□□ 0.17
CISH-203ENST00000491847 CCDC146Q8IYE0 955 aa16.13■□□□□ 0.17
CISH-203ENST00000491847 EXOC6Q8TAG9 804 aa16.12■□□□□ 0.17
CISH-203ENST00000491847 HMMRO75330 724 aa16.12■□□□□ 0.17
CISH-203ENST00000491847 PAK3O75914 559 aaPredicted RBP16.12■□□□□ 0.17
CISH-203ENST00000491847 MYBBP1AQ9BQG0 1328 aaKnown RBP16.11■□□□□ 0.17
CISH-203ENST00000491847 RRP1P56182 461 aaKnown RBP16.11■□□□□ 0.17
CISH-203ENST00000491847 CSPP1Q1MSJ5 1256 aa16.1■□□□□ 0.17
CISH-203ENST00000491847 ST18O60284 1047 aa16.1■□□□□ 0.17
CISH-203ENST00000491847 CC2D2AQ9P2K1 1620 aa16.1■□□□□ 0.17
CISH-203ENST00000491847 KIF15Q9NS87 1388 aa16.1■□□□□ 0.17
CISH-203ENST00000491847 PHF14O94880 888 aa16.1■□□□□ 0.17
CISH-203ENST00000491847 FAM69CQ0P6D2 419 aa16.09■□□□□ 0.17
CISH-203ENST00000491847 TRIM6-TRIM34B2RNG4 842 aa16.09■□□□□ 0.17
CISH-203ENST00000491847 STAC3Q96MF2 364 aa16.09■□□□□ 0.17
CISH-203ENST00000491847 DDX49Q9Y6V7 483 aaKnown RBP16.09■□□□□ 0.17
CISH-203ENST00000491847 CUX1P39880 1505 aa16.09■□□□□ 0.17
CISH-203ENST00000491847 TPM4P67936 248 aa16.08■□□□□ 0.17
CISH-203ENST00000491847 PLIN1O60240 522 aa16.08■□□□□ 0.16
CISH-203ENST00000491847 CSB-PGBD3P0DP91 1061 aa16.08■□□□□ 0.16
CISH-203ENST00000491847 VSIG10Q8N0Z9 540 aa16.08■□□□□ 0.16
CISH-203ENST00000491847 STK31Q9BXU1 1019 aa16.08■□□□□ 0.16
CISH-203ENST00000491847 NGDNQ8NEJ9 315 aaKnown RBP16.08■□□□□ 0.16
CISH-203ENST00000491847 SKOR2Q2VWA4 1001 aaPredicted RBP16.07■□□□□ 0.16
CISH-203ENST00000491847 NOL8Q76FK4 1167 aaKnown RBP16.06■□□□□ 0.16
CISH-203ENST00000491847 CRBNQ96SW2 442 aa16.05■□□□□ 0.16
CISH-203ENST00000491847 ERICH3Q5RHP9 1530 aa16.05■□□□□ 0.16
CISH-203ENST00000491847 ST20-MTHFSA0A0A6YYL1 179 aa16.05■□□□□ 0.16
CISH-203ENST00000491847 CASKIN1Q8WXD9 1431 aa16.05■□□□□ 0.16
CISH-203ENST00000491847 CGNL1Q0VF96 1302 aa16.04■□□□□ 0.16
CISH-203ENST00000491847 SYNJ2O15056 1496 aa16.03■□□□□ 0.16
CISH-203ENST00000491847 HDAC5Q9UQL6 1122 aa16.03■□□□□ 0.16
CISH-203ENST00000491847 TOPBP1Q92547 1522 aa16.03■□□□□ 0.16
CISH-203ENST00000491847 CCDC34Q96HJ3 373 aa16.03■□□□□ 0.16
CISH-203ENST00000491847 FGD6Q6ZV73 1430 aa16.03■□□□□ 0.16
CISH-203ENST00000491847 NESP48681 1621 aa16.02■□□□□ 0.16
CISH-203ENST00000491847 FOXD4L5Q5VV16 416 aaPredicted RBP16.02■□□□□ 0.15
CISH-203ENST00000491847 FOXD4L4Q8WXT5 416 aaPredicted RBP16.02■□□□□ 0.15
CISH-203ENST00000491847 GPATCH3Q96I76 525 aa16.02■□□□□ 0.15
CISH-203ENST00000491847 TRAK1Q9UPV9 953 aa16.02■□□□□ 0.15
CISH-203ENST00000491847 SLC4A10Q6U841 1118 aa16.01■□□□□ 0.15
CISH-203ENST00000491847 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.01■□□□□ 0.15
CISH-203ENST00000491847 E9PSI1 815 aa16.01■□□□□ 0.15
CISH-203ENST00000491847 PANK3Q9H999 370 aa16.01■□□□□ 0.15
CISH-203ENST00000491847 PRG4Q92954 1404 aaPredicted RBP16.01■□□□□ 0.15
CISH-203ENST00000491847 GOLGA6L1Q8N7Z2 621 aa16■□□□□ 0.15
CISH-203ENST00000491847 LMOD3Q0VAK6 560 aa16■□□□□ 0.15
CISH-203ENST00000491847 FYCO1Q9BQS8 1478 aa16■□□□□ 0.15
CISH-203ENST00000491847 NUTM2DQ5VT03 806 aaPredicted RBP16■□□□□ 0.15
CISH-203ENST00000491847 KIF16BQ96L93 1317 aa15.99■□□□□ 0.15
CISH-203ENST00000491847 BCL2L13Q9BXK5 485 aa15.99■□□□□ 0.15
CISH-203ENST00000491847 COG6Q9Y2V7 657 aa15.99■□□□□ 0.15
CISH-203ENST00000491847 RRP7AQ9Y3A4 280 aaKnown RBP15.99■□□□□ 0.15
CISH-203ENST00000491847 HSP90B1P14625 803 aaKnown RBP15.99■□□□□ 0.15
CISH-203ENST00000491847 EVC2Q86UK5 1308 aa15.99■□□□□ 0.15
CISH-203ENST00000491847 ZKSCAN2Q63HK3 967 aa15.99■□□□□ 0.15
CISH-203ENST00000491847 ANKRD45Q5TZF3 282 aa15.98■□□□□ 0.15
CISH-203ENST00000491847 KIF21BO75037 1637 aa15.98■□□□□ 0.15
CISH-203ENST00000491847 CHMP5Q9NZZ3 219 aa15.97■□□□□ 0.15
CISH-203ENST00000491847 POLA1P09884 1462 aaPredicted RBP15.97■□□□□ 0.15
CISH-203ENST00000491847 AMPHP49418 695 aa15.97■□□□□ 0.15
CISH-203ENST00000491847 KIF3AQ9Y496 699 aa15.97■□□□□ 0.15
CISH-203ENST00000491847 ATP6V1DQ9Y5K8 247 aa15.96■□□□□ 0.15
CISH-203ENST00000491847 EFCAB5A4FU69 1503 aa15.96■□□□□ 0.15
CISH-203ENST00000491847 LRRC9Q6ZRR7 1453 aa15.96■□□□□ 0.15
CISH-203ENST00000491847 NOC3LQ8WTT2 800 aaKnown RBP15.96■□□□□ 0.15
CISH-203ENST00000491847 GORABQ5T7V8 394 aa15.95■□□□□ 0.14
CISH-203ENST00000491847 DNMBPQ6XZF7 1577 aa15.94■□□□□ 0.14
CISH-203ENST00000491847 SF3A1Q15459 793 aaKnown RBP15.94■□□□□ 0.14
CISH-203ENST00000491847 ISY1Q9ULR0 285 aaKnown RBP15.94■□□□□ 0.14
CISH-203ENST00000491847 TOP2BQ02880 1626 aa15.93■□□□□ 0.14
CISH-203ENST00000491847 ANKRD50Q9ULJ7 1429 aa15.93■□□□□ 0.14
CISH-203ENST00000491847 APAF1O14727 1248 aa15.93■□□□□ 0.14
CISH-203ENST00000491847 PRDM2Q13029 1718 aa15.93■□□□□ 0.14
CISH-203ENST00000491847 NCOA2Q15596 1464 aa15.92■□□□□ 0.14
CISH-203ENST00000491847 SYNJ1O43426 1573 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms