RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 CUL7Q14999 1698 aa8.26□□□□□ -1.09
PTPRK-213ENST00000490332 MAGI3Q5TCQ9 1506 aa8.24□□□□□ -1.09
PTPRK-213ENST00000490332 PTPRGP23470 1445 aa8.24□□□□□ -1.09
PTPRK-213ENST00000490332 YEATS2Q9ULM3 1422 aa8.24□□□□□ -1.09
PTPRK-213ENST00000490332 GSE1Q14687 1217 aa8.24□□□□□ -1.09
PTPRK-213ENST00000490332 RIMS1Q86UR5 1692 aaKnown RBP8.24□□□□□ -1.09
PTPRK-213ENST00000490332 CFAP43Q8NDM7 1665 aa8.24□□□□□ -1.09
PTPRK-213ENST00000490332 HOXB1P14653 301 aaPredicted RBP8.23□□□□□ -1.09
PTPRK-213ENST00000490332 UHRF1BP1LA0JNW5 1464 aa8.23□□□□□ -1.09
PTPRK-213ENST00000490332 BOLA1Q9Y3E2 137 aa8.21□□□□□ -1.1
PTPRK-213ENST00000490332 PTPRTO14522 1441 aa8.2□□□□□ -1.1
PTPRK-213ENST00000490332 ARAP3Q8WWN8 1544 aa8.19□□□□□ -1.1
PTPRK-213ENST00000490332 RNF166Q96A37 237 aaPredicted RBP8.19□□□□□ -1.1
PTPRK-213ENST00000490332 ARID4BQ4LE39 1312 aaPredicted RBP8.19□□□□□ -1.1
PTPRK-213ENST00000490332 TNIKQ9UKE5 1360 aa8.19□□□□□ -1.1
PTPRK-213ENST00000490332 CD109Q6YHK3 1445 aa8.19□□□□□ -1.1
PTPRK-213ENST00000490332 KDM5BQ9UGL1 1544 aa8.19□□□□□ -1.1
PTPRK-213ENST00000490332 LTBP4Q8N2S1 1624 aa8.18□□□□□ -1.1
PTPRK-213ENST00000490332 STRCQ7RTU9 1775 aa8.18□□□□□ -1.1
PTPRK-213ENST00000490332 PDAP1Q13442 181 aaKnown RBP8.18□□□□□ -1.1
PTPRK-213ENST00000490332 WRNQ14191 1432 aaPredicted RBP eCLIP8.18□□□□□ -1.1
PTPRK-213ENST00000490332 PREX1Q8TCU6 1659 aa8.18□□□□□ -1.1
PTPRK-213ENST00000490332 FBXO3Q9UK99 471 aa8.17□□□□□ -1.1
PTPRK-213ENST00000490332 ERBB3P21860 1342 aa8.17□□□□□ -1.1
PTPRK-213ENST00000490332 UACAQ9BZF9 1416 aa8.17□□□□□ -1.1
PTPRK-213ENST00000490332 UBAP1LF5GYI3 381 aa8.16□□□□□ -1.1
PTPRK-213ENST00000490332 CARMIL2Q6F5E8 1435 aa8.16□□□□□ -1.1
PTPRK-213ENST00000490332 ZNF710Q8N1W2 664 aa8.16□□□□□ -1.1
PTPRK-213ENST00000490332 CABP2Q9NPB3 220 aa8.16□□□□□ -1.1
PTPRK-213ENST00000490332 WDR7Q9Y4E6 1490 aa8.16□□□□□ -1.1
PTPRK-213ENST00000490332 POGZQ7Z3K3 1410 aa8.15□□□□□ -1.1
PTPRK-213ENST00000490332 PHLDB1Q86UU1 1377 aa8.15□□□□□ -1.1
PTPRK-213ENST00000490332 DOK7Q18PE1 504 aa8.15□□□□□ -1.1
PTPRK-213ENST00000490332 KLHL34Q8N239 644 aa8.15□□□□□ -1.1
PTPRK-213ENST00000490332 ZCCHC11Q5TAX3 1644 aaKnown RBP8.14□□□□□ -1.11
PTPRK-213ENST00000490332 VASPP50552 380 aaPredicted RBP8.14□□□□□ -1.11
PTPRK-213ENST00000490332 VARS2Q5ST30 1063 aaKnown RBP8.13□□□□□ -1.11
PTPRK-213ENST00000490332 SETD1BQ9UPS6 1966 aaKnown RBP8.12□□□□□ -1.11
PTPRK-213ENST00000490332 G3V3G9 751 aa8.12□□□□□ -1.11
PTPRK-213ENST00000490332 MYT1LQ9UL68 1186 aa8.12□□□□□ -1.11
PTPRK-213ENST00000490332 TTC37Q6PGP7 1564 aa8.12□□□□□ -1.11
PTPRK-213ENST00000490332 TTBK1Q5TCY1 1321 aaPredicted RBP8.1□□□□□ -1.11
PTPRK-213ENST00000490332 TMEM92Q6UXU6 159 aa8.1□□□□□ -1.11
PTPRK-213ENST00000490332 FANCAO15360 1455 aa8.1□□□□□ -1.11
PTPRK-213ENST00000490332 FER1L4A9Z1Z3 1794 aa8.1□□□□□ -1.11
PTPRK-213ENST00000490332 ARHGEF40Q8TER5 1519 aa8.09□□□□□ -1.11
PTPRK-213ENST00000490332 HSPA1LP34931 641 aa8.09□□□□□ -1.11
PTPRK-213ENST00000490332 ZNF687Q8N1G0 1237 aa8.09□□□□□ -1.11
PTPRK-213ENST00000490332 UHRF1BP1Q6BDS2 1440 aa8.09□□□□□ -1.11
PTPRK-213ENST00000490332 SRCAPQ6ZRS2 3230 aa8.08□□□□□ -1.12
PTPRK-213ENST00000490332 RIMBP2O15034 1052 aa8.07□□□□□ -1.12
PTPRK-213ENST00000490332 GPR153Q6NV75 609 aa8.07□□□□□ -1.12
PTPRK-213ENST00000490332 ZSWIM6Q9HCJ5 1215 aa8.06□□□□□ -1.12
PTPRK-213ENST00000490332 RAPGEF3O95398 923 aa8.04□□□□□ -1.12
PTPRK-213ENST00000490332 EFCAB3Q8N7B9 438 aa8.04□□□□□ -1.12
PTPRK-213ENST00000490332 NEO1Q92859 1461 aa8.04□□□□□ -1.12
PTPRK-213ENST00000490332 AKNAQ7Z591 1439 aa8.03□□□□□ -1.12
PTPRK-213ENST00000490332 FRMPD1Q5SYB0 1578 aa8.03□□□□□ -1.12
PTPRK-213ENST00000490332 MICALL2Q8IY33 904 aa8.03□□□□□ -1.12
PTPRK-213ENST00000490332 BIVM-ERCC5R4GMW8 1640 aa8.03□□□□□ -1.12
PTPRK-213ENST00000490332 TOM1O60784 492 aa8.02□□□□□ -1.13
PTPRK-213ENST00000490332 KCNH8Q96L42 1107 aa8.02□□□□□ -1.13
PTPRK-213ENST00000490332 PTGER2P43116 358 aa8.01□□□□□ -1.13
PTPRK-213ENST00000490332 CIZ1Q9ULV3 898 aaPredicted RBP8.01□□□□□ -1.13
PTPRK-213ENST00000490332 NCOA1Q15788 1441 aa8.01□□□□□ -1.13
PTPRK-213ENST00000490332 LOC105371045A0A1W2PR82 267 aa8□□□□□ -1.13
PTPRK-213ENST00000490332 IFNLR1Q8IU57 520 aaPredicted RBP8□□□□□ -1.13
PTPRK-213ENST00000490332 KIAA0556O60303 1618 aa8□□□□□ -1.13
PTPRK-213ENST00000490332 IQGAP2Q13576 1575 aa7.99□□□□□ -1.13
PTPRK-213ENST00000490332 SPOCK2Q92563 424 aa7.99□□□□□ -1.13
PTPRK-213ENST00000490332 EFCAB5A4FU69 1503 aa7.98□□□□□ -1.13
PTPRK-213ENST00000490332 ARHGEF12Q9NZN5 1544 aa7.98□□□□□ -1.13
PTPRK-213ENST00000490332 PIP4K2BP78356 416 aa7.98□□□□□ -1.13
PTPRK-213ENST00000490332 MS4A4AQ96JQ5 239 aa7.98□□□□□ -1.13
PTPRK-213ENST00000490332 ABCA9Q8IUA7 1624 aa7.98□□□□□ -1.13
PTPRK-213ENST00000490332 ZNF335Q9H4Z2 1342 aaPredicted RBP7.98□□□□□ -1.13
PTPRK-213ENST00000490332 DISP1Q96F81 1524 aa7.98□□□□□ -1.13
PTPRK-213ENST00000490332 HRCP23327 699 aa7.97□□□□□ -1.13
PTPRK-213ENST00000490332 ARSIQ5FYB1 569 aa7.97□□□□□ -1.13
PTPRK-213ENST00000490332 ANKRD13DQ6ZTN6 518 aa7.97□□□□□ -1.13
PTPRK-213ENST00000490332 RGS17Q9UGC6 210 aaPredicted RBP7.97□□□□□ -1.13
PTPRK-213ENST00000490332 MAGI2Q86UL8 1455 aa7.96□□□□□ -1.13
PTPRK-213ENST00000490332 RICTORQ6R327 1708 aa7.96□□□□□ -1.14
PTPRK-213ENST00000490332 KHSRPQ92945 711 aaKnown RBP eCLIP7.96□□□□□ -1.142e-6■■□□□ 11.7
PTPRK-213ENST00000490332 ZMYM4Q5VZL5 1548 aa7.96□□□□□ -1.14
PTPRK-213ENST00000490332 ZFYVE16Q7Z3T8 1539 aa7.96□□□□□ -1.14
PTPRK-213ENST00000490332 DENND4BO75064 1496 aaPredicted RBP7.95□□□□□ -1.14
PTPRK-213ENST00000490332 TRIM26Q12899 539 aaPredicted RBP7.95□□□□□ -1.14
PTPRK-213ENST00000490332 MLECQ14165 292 aa7.95□□□□□ -1.14
PTPRK-213ENST00000490332 PCGF6Q9BYE7 350 aa7.95□□□□□ -1.14
PTPRK-213ENST00000490332 PTPRKQ15262 1439 aa7.95□□□□□ -1.14
PTPRK-213ENST00000490332 FHOD3Q2V2M9 1422 aa7.95□□□□□ -1.14
PTPRK-213ENST00000490332 ZNF316A6NFI3 1004 aaPredicted RBP7.94□□□□□ -1.14
PTPRK-213ENST00000490332 LSM11P83369 360 aaKnown RBP eCLIP7.94□□□□□ -1.14
PTPRK-213ENST00000490332 SIGLEC1Q9BZZ2 1709 aa7.94□□□□□ -1.14
PTPRK-213ENST00000490332 SETD1AO15047 1707 aaKnown RBP7.93□□□□□ -1.14
PTPRK-213ENST00000490332 CEBPAP49715 358 aaPredicted RBP7.93□□□□□ -1.14
PTPRK-213ENST00000490332 CPS1P31327 1500 aa7.93□□□□□ -1.14
PTPRK-213ENST00000490332 UGGT2Q9NYU1 1516 aa7.92□□□□□ -1.14
PTPRK-213ENST00000490332 CAMSAP1Q5T5Y3 1602 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms