RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 TRIM35Q9UPQ4 493 aa13.76□□□□□ -0.21
RAB3GAP1-205ENST00000489858 POTEMA6NI47 508 aa13.75□□□□□ -0.21
RAB3GAP1-205ENST00000489858 SEC24BO95487 1268 aa13.75□□□□□ -0.21
RAB3GAP1-205ENST00000489858 CDK11AQ9UQ88 783 aaPredicted RBP13.75□□□□□ -0.21
RAB3GAP1-205ENST00000489858 COLQQ9Y215 455 aaPredicted RBP13.75□□□□□ -0.21
RAB3GAP1-205ENST00000489858 TROQ12816 1431 aaPredicted RBP13.73□□□□□ -0.21
RAB3GAP1-205ENST00000489858 DCAF8Q5TAQ9 597 aa13.72□□□□□ -0.21
RAB3GAP1-205ENST00000489858 SIN3AQ96ST3 1273 aa13.72□□□□□ -0.21
RAB3GAP1-205ENST00000489858 ADGBQ8N7X0 1667 aa13.72□□□□□ -0.21
RAB3GAP1-205ENST00000489858 TONSLQ96HA7 1378 aa13.71□□□□□ -0.21
RAB3GAP1-205ENST00000489858 POTEGQ6S5H5 508 aa13.71□□□□□ -0.21
RAB3GAP1-205ENST00000489858 DAPK1P53355 1430 aa13.71□□□□□ -0.22
RAB3GAP1-205ENST00000489858 ABCA8O94911 1581 aa13.71□□□□□ -0.22
RAB3GAP1-205ENST00000489858 ROCK1Q13464 1354 aa13.71□□□□□ -0.22
RAB3GAP1-205ENST00000489858 PLB1Q6P1J6 1458 aa13.69□□□□□ -0.22
RAB3GAP1-205ENST00000489858 TMEM106CQ9BVX2 250 aa13.69□□□□□ -0.22
RAB3GAP1-205ENST00000489858 CROCC2H7BZ55 1655 aa13.69□□□□□ -0.22
RAB3GAP1-205ENST00000489858 KDM6BO15054 1643 aa13.68□□□□□ -0.22
RAB3GAP1-205ENST00000489858 KIF14Q15058 1648 aa13.68□□□□□ -0.22
RAB3GAP1-205ENST00000489858 ARID3CA6NKF2 412 aa13.68□□□□□ -0.22
RAB3GAP1-205ENST00000489858 YTHDC1Q96MU7 727 aaKnown RBP13.68□□□□□ -0.22
RAB3GAP1-205ENST00000489858 PLSCR2Q9NRY7 297 aa13.68□□□□□ -0.22
RAB3GAP1-205ENST00000489858 CAMSAP2Q08AD1 1489 aa13.67□□□□□ -0.22
RAB3GAP1-205ENST00000489858 ABCC5O15440 1437 aa13.65□□□□□ -0.22
RAB3GAP1-205ENST00000489858 PRG4Q92954 1404 aaPredicted RBP13.65□□□□□ -0.22
RAB3GAP1-205ENST00000489858 CHD1O14646 1710 aa13.65□□□□□ -0.22
RAB3GAP1-205ENST00000489858 PPP1R15AO75807 674 aaPredicted RBP13.65□□□□□ -0.22
RAB3GAP1-205ENST00000489858 PYGBP11216 843 aa13.65□□□□□ -0.22
RAB3GAP1-205ENST00000489858 RRP7BPQ9NSQ0 103 aa13.65□□□□□ -0.22
RAB3GAP1-205ENST00000489858 VASPP50552 380 aaPredicted RBP13.64□□□□□ -0.23
RAB3GAP1-205ENST00000489858 JPH4Q96JJ6 628 aa13.64□□□□□ -0.23
RAB3GAP1-205ENST00000489858 CHIC2Q9UKJ5 165 aa13.63□□□□□ -0.23
RAB3GAP1-205ENST00000489858 GTF3C3Q9Y5Q9 886 aa13.62□□□□□ -0.23
RAB3GAP1-205ENST00000489858 KDM5BQ9UGL1 1544 aa13.62□□□□□ -0.23
RAB3GAP1-205ENST00000489858 GPATCH8Q9UKJ3 1502 aaKnown RBP13.62□□□□□ -0.23
RAB3GAP1-205ENST00000489858 CDC42BPAQ5VT25 1732 aa13.61□□□□□ -0.23
RAB3GAP1-205ENST00000489858 ADGRL2O95490 1459 aa13.61□□□□□ -0.23
RAB3GAP1-205ENST00000489858 LCE2DQ5TA82 110 aaPredicted RBP13.61□□□□□ -0.23
RAB3GAP1-205ENST00000489858 PCDH10Q9P2E7 1040 aa13.61□□□□□ -0.23
RAB3GAP1-205ENST00000489858 KLHL34Q8N239 644 aa13.6□□□□□ -0.23
RAB3GAP1-205ENST00000489858 TRIM52Q96A61 297 aa13.6□□□□□ -0.23
RAB3GAP1-205ENST00000489858 FAM163AQ96GL9 167 aaPredicted RBP13.6□□□□□ -0.23
RAB3GAP1-205ENST00000489858 SHROOM2Q13796 1616 aa13.6□□□□□ -0.23
RAB3GAP1-205ENST00000489858 DENND4BO75064 1496 aaPredicted RBP13.6□□□□□ -0.23
RAB3GAP1-205ENST00000489858 SHANK2Q9UPX8 1470 aa13.59□□□□□ -0.23
RAB3GAP1-205ENST00000489858 GSE1Q14687 1217 aa13.58□□□□□ -0.24
RAB3GAP1-205ENST00000489858 CFDP1Q9UEE9 299 aaPredicted RBP13.58□□□□□ -0.24
RAB3GAP1-205ENST00000489858 ATP10BO94823 1461 aa13.58□□□□□ -0.24
RAB3GAP1-205ENST00000489858 ABCC10Q5T3U5 1492 aa13.58□□□□□ -0.24
RAB3GAP1-205ENST00000489858 PLCG2P16885 1265 aa13.57□□□□□ -0.24
RAB3GAP1-205ENST00000489858 IRX5P78411 483 aaPredicted RBP13.57□□□□□ -0.24
RAB3GAP1-205ENST00000489858 PCDHB8Q9UN66 801 aa13.56□□□□□ -0.24
RAB3GAP1-205ENST00000489858 MPHOSPH9Q99550 1183 aa13.55□□□□□ -0.24
RAB3GAP1-205ENST00000489858 ZNF644Q9H582 1327 aaPredicted RBP13.55□□□□□ -0.24
RAB3GAP1-205ENST00000489858 PTPRGP23470 1445 aa13.55□□□□□ -0.24
RAB3GAP1-205ENST00000489858 ARHGEF5Q12774 1597 aa13.54□□□□□ -0.24
RAB3GAP1-205ENST00000489858 PREX2Q70Z35 1606 aa13.54□□□□□ -0.24
RAB3GAP1-205ENST00000489858 PLEKHD1A6NEE1 506 aa13.53□□□□□ -0.24
RAB3GAP1-205ENST00000489858 ANKRD30AQ9BXX3 1397 aa13.53□□□□□ -0.24
RAB3GAP1-205ENST00000489858 NCOA1Q15788 1441 aa13.53□□□□□ -0.24
RAB3GAP1-205ENST00000489858 RPRD2Q5VT52 1461 aaKnown RBP13.53□□□□□ -0.24
RAB3GAP1-205ENST00000489858 OCEL1Q9H607 264 aa13.52□□□□□ -0.25
RAB3GAP1-205ENST00000489858 PZPP20742 1482 aa13.51□□□□□ -0.25
RAB3GAP1-205ENST00000489858 ANKRD30BQ9BXX2 1392 aa13.5□□□□□ -0.25
RAB3GAP1-205ENST00000489858 CHRM1P11229 460 aaPredicted RBP13.5□□□□□ -0.25
RAB3GAP1-205ENST00000489858 DDX10Q13206 875 aaKnown RBP13.5□□□□□ -0.25
RAB3GAP1-205ENST00000489858 ZNF467Q7Z7K2 595 aaPredicted RBP13.5□□□□□ -0.25
RAB3GAP1-205ENST00000489858 TEX14Q8IWB6 1497 aa13.49□□□□□ -0.25
RAB3GAP1-205ENST00000489858 C9orf84Q5VXU9 1444 aa13.49□□□□□ -0.25
RAB3GAP1-205ENST00000489858 ABCC2Q92887 1545 aa13.49□□□□□ -0.25
RAB3GAP1-205ENST00000489858 KDM5DQ9BY66 1539 aa13.49□□□□□ -0.25
RAB3GAP1-205ENST00000489858 SLAIN1Q8ND83 568 aa13.48□□□□□ -0.25
RAB3GAP1-205ENST00000489858 ZNF777Q9ULD5 760 aaPredicted RBP13.48□□□□□ -0.25
RAB3GAP1-205ENST00000489858 SAMD9LQ8IVG5 1584 aa13.47□□□□□ -0.25
RAB3GAP1-205ENST00000489858 CDC42BPBQ9Y5S2 1711 aa13.47□□□□□ -0.25
RAB3GAP1-205ENST00000489858 CLASP1Q7Z460 1538 aa13.46□□□□□ -0.25
RAB3GAP1-205ENST00000489858 CCDC141Q6ZP82 1450 aa13.46□□□□□ -0.25
RAB3GAP1-205ENST00000489858 ANKRD50Q9ULJ7 1429 aa13.46□□□□□ -0.26
RAB3GAP1-205ENST00000489858 KIAA1107Q9UPP5 1409 aa13.46□□□□□ -0.26
RAB3GAP1-205ENST00000489858 MYO5CQ9NQX4 1742 aa13.45□□□□□ -0.26
RAB3GAP1-205ENST00000489858 TTC37Q6PGP7 1564 aa13.45□□□□□ -0.26
RAB3GAP1-205ENST00000489858 MAST1Q9Y2H9 1570 aa13.45□□□□□ -0.26
RAB3GAP1-205ENST00000489858 CCER2I3L3R5 266 aa13.44□□□□□ -0.26
RAB3GAP1-205ENST00000489858 ANP32CO43423 234 aa13.44□□□□□ -0.26
RAB3GAP1-205ENST00000489858 POLR1AO95602 1720 aaPredicted RBP13.43□□□□□ -0.26
RAB3GAP1-205ENST00000489858 L3MBTL2Q969R5 705 aa13.42□□□□□ -0.26
RAB3GAP1-205ENST00000489858 HIRIP3Q9BW71 556 aaPredicted RBP13.42□□□□□ -0.26
RAB3GAP1-205ENST00000489858 PLEKHH2Q8IVE3 1493 aa13.42□□□□□ -0.26
RAB3GAP1-205ENST00000489858 MBD5Q9P267 1494 aa13.42□□□□□ -0.26
RAB3GAP1-205ENST00000489858 ERCC6L2Q5T890 1561 aa13.41□□□□□ -0.26
RAB3GAP1-205ENST00000489858 ARHGAP5Q13017 1502 aa13.41□□□□□ -0.26
RAB3GAP1-205ENST00000489858 HSPA5P11021 654 aaKnown RBP13.41□□□□□ -0.26
RAB3GAP1-205ENST00000489858 EIF4G2P78344 907 aaKnown RBP eCLIP13.41□□□□□ -0.26
RAB3GAP1-205ENST00000489858 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.4□□□□□ -0.26
RAB3GAP1-205ENST00000489858 ZCCHC11Q5TAX3 1644 aaKnown RBP13.4□□□□□ -0.26
RAB3GAP1-205ENST00000489858 KIF15Q9NS87 1388 aa13.4□□□□□ -0.26
RAB3GAP1-205ENST00000489858 UHRF1BP1LA0JNW5 1464 aa13.4□□□□□ -0.26
RAB3GAP1-205ENST00000489858 PLXNC1O60486 1568 aa13.4□□□□□ -0.26
RAB3GAP1-205ENST00000489858 SYCP2Q9BX26 1530 aa13.39□□□□□ -0.27
RAB3GAP1-205ENST00000489858 TSPY4P0CV99 314 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms