RNA–Protein interactions for RNA: ENST00000489272.5

CBWD1-216, Transcript of COBW domain containing 1, humanhuman

TSL 5

Gene CBWD1, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-216ENST00000489272 LCE2AQ5TA79 106 aaPredicted RBP11.7□□□□□ -0.54
CBWD1-216ENST00000489272 TREML4Q6UXN2 200 aa11.68□□□□□ -0.54
CBWD1-216ENST00000489272 TSR3Q9UJK0 312 aaKnown RBP11.68□□□□□ -0.54
CBWD1-216ENST00000489272 PPP1R18Q6NYC8 613 aa11.64□□□□□ -0.55
CBWD1-216ENST00000489272 COL9A1P20849 921 aa11.63□□□□□ -0.55
CBWD1-216ENST00000489272 KIAA1468Q9P260 1216 aa11.63□□□□□ -0.55
CBWD1-216ENST00000489272 HPS5Q9UPZ3 1129 aa11.63□□□□□ -0.55
CBWD1-216ENST00000489272 TJAP1Q5JTD0 557 aa11.62□□□□□ -0.55
CBWD1-216ENST00000489272 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.61□□□□□ -0.55
CBWD1-216ENST00000489272 EVI5O60447 810 aa11.6□□□□□ -0.55
CBWD1-216ENST00000489272 ONECUT3O60422 494 aaPredicted RBP11.58□□□□□ -0.56
CBWD1-216ENST00000489272 LRCH3Q96II8 777 aa11.58□□□□□ -0.56
CBWD1-216ENST00000489272 STK17AQ9UEE5 414 aa11.58□□□□□ -0.56
CBWD1-216ENST00000489272 SEPT9Q9UHD8 586 aaPredicted RBP11.58□□□□□ -0.56
CBWD1-216ENST00000489272 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.57□□□□□ -0.56
CBWD1-216ENST00000489272 MYT1Q01538 1121 aa11.56□□□□□ -0.56
CBWD1-216ENST00000489272 FAM98CQ17RN3 349 aaKnown RBP11.55□□□□□ -0.56
CBWD1-216ENST00000489272 IL21Q9HBE4 155 aa11.51□□□□□ -0.57
CBWD1-216ENST00000489272 PCDHGA10Q9Y5H3 936 aa11.51□□□□□ -0.57
CBWD1-216ENST00000489272 PKDCCQ504Y2 493 aa11.5□□□□□ -0.57
CBWD1-216ENST00000489272 PPP1R15BQ5SWA1 713 aa11.5□□□□□ -0.57
CBWD1-216ENST00000489272 DGAT1O75907 488 aa11.49□□□□□ -0.57
CBWD1-216ENST00000489272 MTRQ99707 1265 aa11.49□□□□□ -0.57
CBWD1-216ENST00000489272 PPP4CP60510 307 aa11.48□□□□□ -0.57
CBWD1-216ENST00000489272 TRIM67Q6ZTA4 783 aa11.48□□□□□ -0.57
CBWD1-216ENST00000489272 FBXW7Q969H0 707 aa11.46□□□□□ -0.57
CBWD1-216ENST00000489272 CRISPLD2Q9H0B8 497 aa11.46□□□□□ -0.57
CBWD1-216ENST00000489272 TRIM6-TRIM34B2RNG4 842 aa11.44□□□□□ -0.58
CBWD1-216ENST00000489272 TYW1BQ6NUM6 668 aa11.43□□□□□ -0.58
CBWD1-216ENST00000489272 ZNF516Q92618 1163 aa11.42□□□□□ -0.58
CBWD1-216ENST00000489272 WFS1O76024 890 aa11.4□□□□□ -0.58
CBWD1-216ENST00000489272 GGCXP38435 758 aa11.39□□□□□ -0.59
CBWD1-216ENST00000489272 INSM1Q01101 510 aaPredicted RBP11.39□□□□□ -0.59
CBWD1-216ENST00000489272 WIPF1O43516 503 aa11.38□□□□□ -0.59
CBWD1-216ENST00000489272 PHF14O94880 888 aa11.38□□□□□ -0.59
CBWD1-216ENST00000489272 ECM2O94769 699 aaPredicted RBP11.37□□□□□ -0.59
CBWD1-216ENST00000489272 MAP3K9P80192 1104 aa11.37□□□□□ -0.59
CBWD1-216ENST00000489272 TMUB1Q9BVT8 246 aa11.36□□□□□ -0.59
CBWD1-216ENST00000489272 PRR20EP86478 221 aa11.35□□□□□ -0.59
CBWD1-216ENST00000489272 PRR20CP86479 221 aa11.35□□□□□ -0.59
CBWD1-216ENST00000489272 PRR20DP86480 221 aa11.35□□□□□ -0.59
CBWD1-216ENST00000489272 PRR20BP86481 221 aa11.35□□□□□ -0.59
CBWD1-216ENST00000489272 PRR20AP86496 221 aa11.35□□□□□ -0.59
CBWD1-216ENST00000489272 C6orf132Q5T0Z8 1188 aa11.35□□□□□ -0.59
CBWD1-216ENST00000489272 NKX2-3Q8TAU0 364 aa11.35□□□□□ -0.59
CBWD1-216ENST00000489272 RGL2O15211 777 aa11.33□□□□□ -0.6
CBWD1-216ENST00000489272 ST8SIA5O15466 376 aa11.31□□□□□ -0.6
CBWD1-216ENST00000489272 EMID1Q96A84 441 aaPredicted RBP11.31□□□□□ -0.6
CBWD1-216ENST00000489272 FAM187AA6NFU0 413 aa11.3□□□□□ -0.6
CBWD1-216ENST00000489272 SLC19A1P41440 591 aa11.3□□□□□ -0.6
CBWD1-216ENST00000489272 LCE2CQ5TA81 110 aa11.29□□□□□ -0.6
CBWD1-216ENST00000489272 SAMD7Q7Z3H4 446 aa11.29□□□□□ -0.6
CBWD1-216ENST00000489272 AAASQ9NRG9 546 aa11.29□□□□□ -0.6
CBWD1-216ENST00000489272 NFX1Q12986 1120 aaKnown RBP11.28□□□□□ -0.6
CBWD1-216ENST00000489272 NCKAP5LQ9HCH0 1330 aa11.28□□□□□ -0.6
CBWD1-216ENST00000489272 PDE4AP27815 886 aa11.27□□□□□ -0.61
CBWD1-216ENST00000489272 PACS2Q86VP3 889 aa11.27□□□□□ -0.61
CBWD1-216ENST00000489272 ZNF598Q86UK7 904 aaKnown RBP11.26□□□□□ -0.61
CBWD1-216ENST00000489272 SPRYD7Q5W111 196 aa11.25□□□□□ -0.61
CBWD1-216ENST00000489272 EPAS1Q99814 870 aa11.25□□□□□ -0.61
CBWD1-216ENST00000489272 TSKSQ9UJT2 592 aa11.23□□□□□ -0.61
CBWD1-216ENST00000489272 APLP1P51693 650 aa11.22□□□□□ -0.61
CBWD1-216ENST00000489272 EMILIN3Q9NT22 766 aa11.21□□□□□ -0.61
CBWD1-216ENST00000489272 GDF9O60383 454 aa11.19□□□□□ -0.62
CBWD1-216ENST00000489272 SUZ12Q15022 739 aaKnown RBP11.19□□□□□ -0.62
CBWD1-216ENST00000489272 DACH1Q9UI36 760 aa11.19□□□□□ -0.62
CBWD1-216ENST00000489272 RNF223E7ERA6 249 aa11.18□□□□□ -0.62
CBWD1-216ENST00000489272 DDX27Q96GQ7 796 aaKnown RBP11.17□□□□□ -0.62
CBWD1-216ENST00000489272 TNFRSF10AO00220 468 aa11.16□□□□□ -0.62
CBWD1-216ENST00000489272 COPS2P61201 443 aa11.16□□□□□ -0.62
CBWD1-216ENST00000489272 ZNF697Q5TEC3 545 aa11.16□□□□□ -0.62
CBWD1-216ENST00000489272 CRIPAKQ8N1N5 446 aa11.15□□□□□ -0.62
CBWD1-216ENST00000489272 C11orf95C9JLR9 678 aaPredicted RBP11.14□□□□□ -0.63
CBWD1-216ENST00000489272 SMAPO00193 183 aa11.14□□□□□ -0.63
CBWD1-216ENST00000489272 RBM33Q96EV2 1170 aaKnown RBP11.14□□□□□ -0.63
CBWD1-216ENST00000489272 LARP6Q9BRS8 491 aaKnown RBP11.14□□□□□ -0.63
CBWD1-216ENST00000489272 ZPR1O75312 459 aa11.13□□□□□ -0.63
CBWD1-216ENST00000489272 HS6ST3Q8IZP7 471 aa11.13□□□□□ -0.63
CBWD1-216ENST00000489272 GMPR2Q9P2T1 348 aaKnown RBP11.13□□□□□ -0.63
CBWD1-216ENST00000489272 FAM181BA6NEQ2 426 aa11.11□□□□□ -0.63
CBWD1-216ENST00000489272 C3orf80F5H4A9 247 aa11.1□□□□□ -0.63
CBWD1-216ENST00000489272 RNF40O75150 1001 aa11.1□□□□□ -0.63
CBWD1-216ENST00000489272 PKD2Q13563 968 aa11.1□□□□□ -0.63
CBWD1-216ENST00000489272 MFSD10Q14728 455 aa11.1□□□□□ -0.63
CBWD1-216ENST00000489272 LIAT1Q6ZQX7 453 aa11.1□□□□□ -0.63
CBWD1-216ENST00000489272 ANKLE1Q8NAG6 615 aa11.09□□□□□ -0.63
CBWD1-216ENST00000489272 NECTIN2Q92692 538 aa11.08□□□□□ -0.64
CBWD1-216ENST00000489272 HDGFP51858 240 aaKnown RBP11.06□□□□□ -0.64
CBWD1-216ENST00000489272 RYDENQ9NUL5 291 aaKnown RBP11.06□□□□□ -0.64
CBWD1-216ENST00000489272 CDCA7LQ96GN5 454 aa11.05□□□□□ -0.64
CBWD1-216ENST00000489272 TATDN2Q93075 761 aa11.04□□□□□ -0.64
CBWD1-216ENST00000489272 FAM198AQ9UFP1 575 aa11.04□□□□□ -0.64
CBWD1-216ENST00000489272 TERTO14746 1132 aaKnown RBP11.03□□□□□ -0.64
CBWD1-216ENST00000489272 AVPP01185 164 aa11.03□□□□□ -0.64
CBWD1-216ENST00000489272 NBPF26B4DH59 902 aa11.02□□□□□ -0.65
CBWD1-216ENST00000489272 AXIN1O15169 862 aa11.01□□□□□ -0.65
CBWD1-216ENST00000489272 PRSS12P56730 875 aa11.01□□□□□ -0.65
CBWD1-216ENST00000489272 EN1Q05925 392 aaPredicted RBP11.01□□□□□ -0.65
CBWD1-216ENST00000489272 TSR1Q2NL82 804 aaKnown RBP11.01□□□□□ -0.65
CBWD1-216ENST00000489272 PNMA3Q9UL41 463 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms