RNA–Protein interactions for RNA: ENST00000486983.1

SMARCAL1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 793 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-212ENST00000486983 ADAM33Q9BZ11 813 aa11.44□□□□□ -0.58
SMARCAL1-212ENST00000486983 ANO8Q9HCE9 1232 aaPredicted RBP11.44□□□□□ -0.58
SMARCAL1-212ENST00000486983 RYDENQ9NUL5 291 aaKnown RBP11.44□□□□□ -0.58
SMARCAL1-212ENST00000486983 GOLGA8CPA6NN73 597 aa11.42□□□□□ -0.58
SMARCAL1-212ENST00000486983 EVI5O60447 810 aa11.42□□□□□ -0.58
SMARCAL1-212ENST00000486983 ZDHHC16Q969W1 377 aa11.42□□□□□ -0.58
SMARCAL1-212ENST00000486983 CCDC88BA6NC98 1476 aa11.42□□□□□ -0.58
SMARCAL1-212ENST00000486983 A0A0G2JS52 829 aa11.41□□□□□ -0.58
SMARCAL1-212ENST00000486983 RGS20O76081 388 aa11.41□□□□□ -0.58
SMARCAL1-212ENST00000486983 PDE4AP27815 886 aa11.39□□□□□ -0.59
SMARCAL1-212ENST00000486983 NBPF3Q9H094 633 aa11.39□□□□□ -0.59
SMARCAL1-212ENST00000486983 IRX2Q9BZI1 471 aaPredicted RBP11.36□□□□□ -0.59
SMARCAL1-212ENST00000486983 LOC105371045A0A1W2PR82 267 aa11.35□□□□□ -0.59
SMARCAL1-212ENST00000486983 DDX27Q96GQ7 796 aaKnown RBP11.34□□□□□ -0.59
SMARCAL1-212ENST00000486983 LARP6Q9BRS8 491 aaKnown RBP11.34□□□□□ -0.59
SMARCAL1-212ENST00000486983 ATAD2BQ9ULI0 1458 aa11.33□□□□□ -0.6
SMARCAL1-212ENST00000486983 PPP1R3GB7ZBB8 358 aa11.33□□□□□ -0.6
SMARCAL1-212ENST00000486983 PROX2Q3B8N5 592 aa11.32□□□□□ -0.6
SMARCAL1-212ENST00000486983 EMILIN3Q9NT22 766 aa11.32□□□□□ -0.6
SMARCAL1-212ENST00000486983 GTPBP6O43824 516 aaPredicted RBP11.31□□□□□ -0.6
SMARCAL1-212ENST00000486983 MAP3K9P80192 1104 aa11.31□□□□□ -0.6
SMARCAL1-212ENST00000486983 MFSD10Q14728 455 aa11.31□□□□□ -0.6
SMARCAL1-212ENST00000486983 PCDHGA10Q9Y5H3 936 aa11.31□□□□□ -0.6
SMARCAL1-212ENST00000486983 COL9A1P20849 921 aa11.3□□□□□ -0.6
SMARCAL1-212ENST00000486983 RABGEF1Q9UJ41 708 aa11.3□□□□□ -0.6
SMARCAL1-212ENST00000486983 CC2D2AQ9P2K1 1620 aa11.3□□□□□ -0.6
SMARCAL1-212ENST00000486983 BAZ1BQ9UIG0 1483 aaKnown RBP11.28□□□□□ -0.6
SMARCAL1-212ENST00000486983 ANKK1Q8NFD2 765 aa11.28□□□□□ -0.6
SMARCAL1-212ENST00000486983 EEA1Q15075 1411 aa11.27□□□□□ -0.6
SMARCAL1-212ENST00000486983 ITGBL1O95965 494 aaPredicted RBP11.27□□□□□ -0.61
SMARCAL1-212ENST00000486983 BCAMP50895 628 aa11.27□□□□□ -0.61
SMARCAL1-212ENST00000486983 HMGXB3Q12766 1538 aa11.25□□□□□ -0.61
SMARCAL1-212ENST00000486983 ABCC8Q09428 1581 aa11.25□□□□□ -0.61
SMARCAL1-212ENST00000486983 HRCP23327 699 aa11.23□□□□□ -0.61
SMARCAL1-212ENST00000486983 TYW1BQ6NUM6 668 aa11.23□□□□□ -0.61
SMARCAL1-212ENST00000486983 FBXW7Q969H0 707 aa11.23□□□□□ -0.61
SMARCAL1-212ENST00000486983 PHF14O94880 888 aa11.22□□□□□ -0.61
SMARCAL1-212ENST00000486983 SOWAHBA6NEL2 793 aa11.21□□□□□ -0.61
SMARCAL1-212ENST00000486983 LAPTM4BQ86VI4 370 aa11.21□□□□□ -0.61
SMARCAL1-212ENST00000486983 NCAPD3P42695 1498 aa11.2□□□□□ -0.62
SMARCAL1-212ENST00000486983 TRIM26Q12899 539 aaPredicted RBP11.2□□□□□ -0.62
SMARCAL1-212ENST00000486983 CADPS2Q86UW7 1296 aa11.2□□□□□ -0.62
SMARCAL1-212ENST00000486983 ZFRQ96KR1 1074 aaKnown RBP11.2□□□□□ -0.62
SMARCAL1-212ENST00000486983 PCGF6Q9BYE7 350 aa11.2□□□□□ -0.62
SMARCAL1-212ENST00000486983 KIAA1468Q9P260 1216 aa11.2□□□□□ -0.62
SMARCAL1-212ENST00000486983 WRNQ14191 1432 aaPredicted RBP eCLIP11.19□□□□□ -0.62
SMARCAL1-212ENST00000486983 WBP1LQ9NX94 342 aa11.18□□□□□ -0.62
SMARCAL1-212ENST00000486983 SEPT9Q9UHD8 586 aaPredicted RBP11.18□□□□□ -0.62
SMARCAL1-212ENST00000486983 FAM9AQ8IZU1 332 aaPredicted RBP11.17□□□□□ -0.62
SMARCAL1-212ENST00000486983 NYAP1Q6ZVC0 841 aa11.16□□□□□ -0.62
SMARCAL1-212ENST00000486983 C6orf132Q5T0Z8 1188 aa11.14□□□□□ -0.63
SMARCAL1-212ENST00000486983 SYNJ1O43426 1573 aa11.13□□□□□ -0.63
SMARCAL1-212ENST00000486983 ONECUT3O60422 494 aaPredicted RBP11.13□□□□□ -0.63
SMARCAL1-212ENST00000486983 TRIM6-TRIM34B2RNG4 842 aa11.12□□□□□ -0.63
SMARCAL1-212ENST00000486983 KCNC4Q03721 635 aa11.12□□□□□ -0.63
SMARCAL1-212ENST00000486983 EPAS1Q99814 870 aa11.12□□□□□ -0.63
SMARCAL1-212ENST00000486983 SOGA1O94964 1423 aa11.11□□□□□ -0.63
SMARCAL1-212ENST00000486983 DPYSL4O14531 572 aa11.11□□□□□ -0.63
SMARCAL1-212ENST00000486983 CAMK2BQ13554 666 aa11.11□□□□□ -0.63
SMARCAL1-212ENST00000486983 FAM98CQ17RN3 349 aaKnown RBP11.11□□□□□ -0.63
SMARCAL1-212ENST00000486983 Q6ZNB5 142 aa11.11□□□□□ -0.63
SMARCAL1-212ENST00000486983 TNIKQ9UKE5 1360 aa11.11□□□□□ -0.63
SMARCAL1-212ENST00000486983 TOP2BQ02880 1626 aa11.09□□□□□ -0.63
SMARCAL1-212ENST00000486983 GOLGA3Q08378 1498 aa11.09□□□□□ -0.63
SMARCAL1-212ENST00000486983 RBM33Q96EV2 1170 aaKnown RBP11.09□□□□□ -0.63
SMARCAL1-212ENST00000486983 KIF21BO75037 1637 aa11.09□□□□□ -0.63
SMARCAL1-212ENST00000486983 BIVM-ERCC5R4GMW8 1640 aa11.09□□□□□ -0.63
SMARCAL1-212ENST00000486983 HPS5Q9UPZ3 1129 aa11.08□□□□□ -0.64
SMARCAL1-212ENST00000486983 LRCH3Q96II8 777 aa11.07□□□□□ -0.64
SMARCAL1-212ENST00000486983 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.07□□□□□ -0.64
SMARCAL1-212ENST00000486983 TSR3Q9UJK0 312 aaKnown RBP11.07□□□□□ -0.64
SMARCAL1-212ENST00000486983 CEP164Q9UPV0 1460 aa11.06□□□□□ -0.64
SMARCAL1-212ENST00000486983 DDX12PQ92771 950 aa11.06□□□□□ -0.64
SMARCAL1-212ENST00000486983 CEP162Q5TB80 1403 aa11.05□□□□□ -0.64
SMARCAL1-212ENST00000486983 CFTRP13569 1480 aa11.05□□□□□ -0.64
SMARCAL1-212ENST00000486983 RUSC2Q8N2Y8 1516 aa11.03□□□□□ -0.64
SMARCAL1-212ENST00000486983 TSKSQ9UJT2 592 aa11.02□□□□□ -0.65
SMARCAL1-212ENST00000486983 LCE2BO14633 110 aa11.01□□□□□ -0.65
SMARCAL1-212ENST00000486983 EN1Q05925 392 aaPredicted RBP11.01□□□□□ -0.65
SMARCAL1-212ENST00000486983 TSR1Q2NL82 804 aaKnown RBP11.01□□□□□ -0.65
SMARCAL1-212ENST00000486983 NBR1Q14596 966 aa11□□□□□ -0.65
SMARCAL1-212ENST00000486983 PRDM2Q13029 1718 aa11□□□□□ -0.65
SMARCAL1-212ENST00000486983 MAP3K7O43318 606 aa10.98□□□□□ -0.65
SMARCAL1-212ENST00000486983 ZEB1P37275 1124 aaPredicted RBP10.98□□□□□ -0.65
SMARCAL1-212ENST00000486983 PACS2Q86VP3 889 aa10.97□□□□□ -0.65
SMARCAL1-212ENST00000486983 ERICH3Q5RHP9 1530 aa10.97□□□□□ -0.65
SMARCAL1-212ENST00000486983 LAPTM4AQ15012 233 aa10.96□□□□□ -0.65
SMARCAL1-212ENST00000486983 CUX1P39880 1505 aa10.95□□□□□ -0.66
SMARCAL1-212ENST00000486983 PPP4CP60510 307 aa10.95□□□□□ -0.66
SMARCAL1-212ENST00000486983 PDIA6Q15084 440 aa10.95□□□□□ -0.66
SMARCAL1-212ENST00000486983 TJAP1Q5JTD0 557 aa10.95□□□□□ -0.66
SMARCAL1-212ENST00000486983 SMAPO00193 183 aa10.94□□□□□ -0.66
SMARCAL1-212ENST00000486983 GFRA3O60609 400 aa10.94□□□□□ -0.66
SMARCAL1-212ENST00000486983 SAMD7Q7Z3H4 446 aa10.94□□□□□ -0.66
SMARCAL1-212ENST00000486983 FAM198AQ9UFP1 575 aa10.93□□□□□ -0.66
SMARCAL1-212ENST00000486983 PRXQ9BXM0 1461 aa10.93□□□□□ -0.66
SMARCAL1-212ENST00000486983 C3orf80F5H4A9 247 aa10.92□□□□□ -0.66
SMARCAL1-212ENST00000486983 CDCA7LQ96GN5 454 aa10.92□□□□□ -0.66
SMARCAL1-212ENST00000486983 CADPSQ9ULU8 1353 aa10.91□□□□□ -0.66
SMARCAL1-212ENST00000486983 PRIM1P49642 420 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms