RNA–Protein interactions for RNA: ENST00000486148.1

TNXB-205, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,669 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-205ENST00000486148 TTC37Q6PGP7 1564 aa23.81■■□□□ 1.4
TNXB-205ENST00000486148 CHD1O14646 1710 aa23.81■■□□□ 1.4
TNXB-205ENST00000486148 SMG6Q86US8 1419 aaKnown RBP23.81■■□□□ 1.4
TNXB-205ENST00000486148 RSPH4AQ5TD94 716 aa23.8■■□□□ 1.4
TNXB-205ENST00000486148 B4GALNT3Q6L9W6 998 aa23.79■■□□□ 1.4
TNXB-205ENST00000486148 PNISRQ8TF01 805 aaKnown RBP23.79■■□□□ 1.4
TNXB-205ENST00000486148 ARHGAP5Q13017 1502 aa23.78■■□□□ 1.4
TNXB-205ENST00000486148 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.77■■□□□ 1.4
TNXB-205ENST00000486148 SENP3-EIF4A1A0A087X0R7 540 aa23.77■■□□□ 1.4
TNXB-205ENST00000486148 CCDC144AA2RUR9 1427 aa23.76■■□□□ 1.39
TNXB-205ENST00000486148 TMC1Q8TDI8 760 aa23.76■■□□□ 1.39
TNXB-205ENST00000486148 MAST1Q9Y2H9 1570 aa23.75■■□□□ 1.39
TNXB-205ENST00000486148 NUDCQ9Y266 331 aa23.75■■□□□ 1.39
TNXB-205ENST00000486148 PRAG1Q86YV5 1406 aa23.75■■□□□ 1.39
TNXB-205ENST00000486148 UNC13BO14795 1591 aa23.75■■□□□ 1.39
TNXB-205ENST00000486148 PLA2R1Q13018 1463 aa23.74■■□□□ 1.39
TNXB-205ENST00000486148 E9PCH4 1651 aa23.74■■□□□ 1.39
TNXB-205ENST00000486148 TRPM1Q7Z4N2 1603 aa23.74■■□□□ 1.39
TNXB-205ENST00000486148 SHROOM2Q13796 1616 aa23.74■■□□□ 1.39
TNXB-205ENST00000486148 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.73■■□□□ 1.39
TNXB-205ENST00000486148 RGL3Q3MIN7 710 aa23.72■■□□□ 1.39
TNXB-205ENST00000486148 ERCC6L2Q5T890 1561 aa23.72■■□□□ 1.39
TNXB-205ENST00000486148 ERICH6Q7L0X2 663 aa23.71■■□□□ 1.39
TNXB-205ENST00000486148 NBPF1Q3BBV0 1214 aa23.7■■□□□ 1.38
TNXB-205ENST00000486148 PLEKHH2Q8IVE3 1493 aa23.69■■□□□ 1.38
TNXB-205ENST00000486148 MYBBP1AQ9BQG0 1328 aaKnown RBP23.68■■□□□ 1.38
TNXB-205ENST00000486148 A2MP01023 1474 aa23.68■■□□□ 1.38
TNXB-205ENST00000486148 MYO5CQ9NQX4 1742 aa23.68■■□□□ 1.38
TNXB-205ENST00000486148 LRPPRCP42704 1394 aaKnown RBP23.68■■□□□ 1.38
TNXB-205ENST00000486148 ABCC2Q92887 1545 aa23.68■■□□□ 1.38
TNXB-205ENST00000486148 PLXNC1O60486 1568 aa23.68■■□□□ 1.38
TNXB-205ENST00000486148 RNF123Q5XPI4 1314 aa23.68■■□□□ 1.38
TNXB-205ENST00000486148 RALBP1Q15311 655 aa23.67■■□□□ 1.38
TNXB-205ENST00000486148 BRD4O60885 1362 aaPredicted RBP23.67■■□□□ 1.38
TNXB-205ENST00000486148 IQGAP3Q86VI3 1631 aa23.66■■□□□ 1.38
TNXB-205ENST00000486148 KTN1Q86UP2 1357 aaKnown RBP23.66■■□□□ 1.38
TNXB-205ENST00000486148 DEKP35659 375 aaKnown RBP23.66■■□□□ 1.38
TNXB-205ENST00000486148 GPRASP1Q5JY77 1395 aa23.64■■□□□ 1.37
TNXB-205ENST00000486148 DUOX2Q9NRD8 1548 aa23.61■■□□□ 1.37
TNXB-205ENST00000486148 PRDM15P57071 1507 aaPredicted RBP23.59■■□□□ 1.37
TNXB-205ENST00000486148 PARD3Q8TEW0 1356 aa23.59■■□□□ 1.37
TNXB-205ENST00000486148 MAGI2Q86UL8 1455 aa23.58■■□□□ 1.37
TNXB-205ENST00000486148 LAMC1P11047 1609 aa23.58■■□□□ 1.37
TNXB-205ENST00000486148 MYT1LQ9UL68 1186 aa23.58■■□□□ 1.37
TNXB-205ENST00000486148 COL17A1Q9UMD9 1497 aaPredicted RBP23.58■■□□□ 1.36
TNXB-205ENST00000486148 PER1O15534 1290 aaPredicted RBP23.57■■□□□ 1.36
TNXB-205ENST00000486148 TESK2Q96S53 571 aa23.57■■□□□ 1.36
TNXB-205ENST00000486148 DISP3Q9P2K9 1392 aa23.57■■□□□ 1.36
TNXB-205ENST00000486148 PLCH2O75038 1416 aa23.56■■□□□ 1.36
TNXB-205ENST00000486148 ERBINQ96RT1 1412 aa23.56■■□□□ 1.36
TNXB-205ENST00000486148 ATP10AO60312 1499 aa23.56■■□□□ 1.36
TNXB-205ENST00000486148 NLRP13Q86W25 1043 aa23.56■■□□□ 1.36
TNXB-205ENST00000486148 ZCCHC11Q5TAX3 1644 aaKnown RBP23.54■■□□□ 1.36
TNXB-205ENST00000486148 EIF2AK4Q9P2K8 1649 aaKnown RBP23.53■■□□□ 1.36
TNXB-205ENST00000486148 CCDC136Q96JN2 1154 aa23.52■■□□□ 1.36
TNXB-205ENST00000486148 EFCAB2Q5VUJ9 269 aa23.51■■□□□ 1.35
TNXB-205ENST00000486148 ANO8Q9HCE9 1232 aaPredicted RBP23.51■■□□□ 1.35
TNXB-205ENST00000486148 TRAPPC8Q9Y2L5 1435 aa23.51■■□□□ 1.35
TNXB-205ENST00000486148 ABCC1P33527 1531 aa23.51■■□□□ 1.35
TNXB-205ENST00000486148 SALL2Q9Y467 1007 aaPredicted RBP23.49■■□□□ 1.35
TNXB-205ENST00000486148 CC2D1BQ5T0F9 858 aaKnown RBP23.48■■□□□ 1.35
TNXB-205ENST00000486148 PANK3Q9H999 370 aa23.47■■□□□ 1.35
TNXB-205ENST00000486148 RNF17Q9BXT8 1623 aaKnown RBP23.46■■□□□ 1.35
TNXB-205ENST00000486148 UHRF1BP1LA0JNW5 1464 aa23.45■■□□□ 1.34
TNXB-205ENST00000486148 TMF1P82094 1093 aa23.45■■□□□ 1.34
TNXB-205ENST00000486148 WASHC2CQ9Y4E1 1318 aa23.44■■□□□ 1.34
TNXB-205ENST00000486148 CLASP1Q7Z460 1538 aa23.43■■□□□ 1.34
TNXB-205ENST00000486148 RRP1P56182 461 aaKnown RBP23.43■■□□□ 1.34
TNXB-205ENST00000486148 AFAP1Q8N556 730 aa23.41■■□□□ 1.34
TNXB-205ENST00000486148 RCAN3Q9UKA8 241 aa23.4■■□□□ 1.34
TNXB-205ENST00000486148 SPAG9O60271 1321 aaKnown RBP23.4■■□□□ 1.34
TNXB-205ENST00000486148 MADDQ8WXG6 1647 aa23.4■■□□□ 1.34
TNXB-205ENST00000486148 PDE3BQ13370 1112 aa23.38■■□□□ 1.33
TNXB-205ENST00000486148 CDCA7LQ96GN5 454 aa23.38■■□□□ 1.33
TNXB-205ENST00000486148 ZFYVE16Q7Z3T8 1539 aa23.38■■□□□ 1.33
TNXB-205ENST00000486148 BLMP54132 1417 aaPredicted RBP23.37■■□□□ 1.33
TNXB-205ENST00000486148 TRPM2O94759 1503 aa23.36■■□□□ 1.33
TNXB-205ENST00000486148 EXOC6Q8TAG9 804 aa23.36■■□□□ 1.33
TNXB-205ENST00000486148 RTEL1-TNFRSF6BF6WH68 1400 aa23.35■■□□□ 1.33
TNXB-205ENST00000486148 IQGAP1P46940 1657 aa23.35■■□□□ 1.33
TNXB-205ENST00000486148 WDR7Q9Y4E6 1490 aa23.34■■□□□ 1.33
TNXB-205ENST00000486148 NBR1Q14596 966 aa23.34■■□□□ 1.33
TNXB-205ENST00000486148 SPHKAPQ2M3C7 1700 aa23.33■■□□□ 1.33
TNXB-205ENST00000486148 CEP152O94986 1710 aa23.33■■□□□ 1.32
TNXB-205ENST00000486148 CLTCL1P53675 1640 aa23.32■■□□□ 1.32
TNXB-205ENST00000486148 PTPRTO14522 1441 aa23.32■■□□□ 1.32
TNXB-205ENST00000486148 INSRP06213 1382 aa23.32■■□□□ 1.32
TNXB-205ENST00000486148 ARAP3Q8WWN8 1544 aa23.32■■□□□ 1.32
TNXB-205ENST00000486148 ZMYM4Q5VZL5 1548 aa23.31■■□□□ 1.32
TNXB-205ENST00000486148 DEPDC5O75140 1603 aa23.31■■□□□ 1.32
TNXB-205ENST00000486148 PAK3O75914 559 aaPredicted RBP23.3■■□□□ 1.32
TNXB-205ENST00000486148 NOP58Q9Y2X3 529 aaKnown RBP23.29■■□□□ 1.32
TNXB-205ENST00000486148 SCAF11Q99590 1463 aaKnown RBP23.27■■□□□ 1.32
TNXB-205ENST00000486148 TET3O43151 1660 aa23.27■■□□□ 1.32
TNXB-205ENST00000486148 ADAMTS8Q9UP79 889 aa23.26■■□□□ 1.31
TNXB-205ENST00000486148 SCAPERQ9BY12 1400 aa23.26■■□□□ 1.31
TNXB-205ENST00000486148 KNSTRNQ9Y448 316 aa23.26■■□□□ 1.31
TNXB-205ENST00000486148 ATP7AQ04656 1500 aa23.25■■□□□ 1.31
TNXB-205ENST00000486148 INO80Q9ULG1 1556 aaPredicted RBP23.25■■□□□ 1.31
TNXB-205ENST00000486148 PPP2R1AP30153 589 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms