RNA–Protein interactions for RNA: ENST00000486078.1

GTF2B-206, Transcript of general transcription factor IIB, humanhuman

TSL 5

Gene GTF2B, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2B-206ENST00000486078 RAPGEF3O95398 923 aa8.72□□□□□ -1.01
GTF2B-206ENST00000486078 POTEIP0CG38 1075 aa8.7□□□□□ -1.02
GTF2B-206ENST00000486078 CARMIL1Q5VZK9 1371 aa8.7□□□□□ -1.02
GTF2B-206ENST00000486078 IFNL1Q8IU54 200 aa8.69□□□□□ -1.02
GTF2B-206ENST00000486078 KIF27Q86VH2 1401 aa8.69□□□□□ -1.02
GTF2B-206ENST00000486078 TIE1P35590 1138 aa8.67□□□□□ -1.02
GTF2B-206ENST00000486078 ASTLQ6HA08 431 aaPredicted RBP8.67□□□□□ -1.02
GTF2B-206ENST00000486078 ZNF467Q7Z7K2 595 aaPredicted RBP8.67□□□□□ -1.02
GTF2B-206ENST00000486078 PHLDB1Q86UU1 1377 aa8.67□□□□□ -1.02
GTF2B-206ENST00000486078 YEATS2Q9ULM3 1422 aa8.66□□□□□ -1.02
GTF2B-206ENST00000486078 KIAA0556O60303 1618 aa8.65□□□□□ -1.02
GTF2B-206ENST00000486078 ATMINO43313 823 aaPredicted RBP8.65□□□□□ -1.02
GTF2B-206ENST00000486078 PCDHB8Q9UN66 801 aa8.65□□□□□ -1.02
GTF2B-206ENST00000486078 UGGT2Q9NYU1 1516 aa8.64□□□□□ -1.03
GTF2B-206ENST00000486078 MLECQ14165 292 aa8.64□□□□□ -1.03
GTF2B-206ENST00000486078 TRPC6Q9Y210 931 aa8.64□□□□□ -1.03
GTF2B-206ENST00000486078 POGZQ7Z3K3 1410 aa8.63□□□□□ -1.03
GTF2B-206ENST00000486078 STRCQ7RTU9 1775 aa8.63□□□□□ -1.03
GTF2B-206ENST00000486078 BMP2KQ9NSY1 1161 aaPredicted RBP8.63□□□□□ -1.03
GTF2B-206ENST00000486078 FRMPD1Q5SYB0 1578 aa8.62□□□□□ -1.03
GTF2B-206ENST00000486078 ARID3CA6NKF2 412 aa8.62□□□□□ -1.03
GTF2B-206ENST00000486078 BRPF1P55201 1214 aaPredicted RBP8.62□□□□□ -1.03
GTF2B-206ENST00000486078 P3H3Q8IVL6 736 aa8.62□□□□□ -1.03
GTF2B-206ENST00000486078 NPM2Q86SE8 214 aaKnown RBP8.61□□□□□ -1.03
GTF2B-206ENST00000486078 NEO1Q92859 1461 aa8.61□□□□□ -1.03
GTF2B-206ENST00000486078 ABCA8O94911 1581 aa8.61□□□□□ -1.03
GTF2B-206ENST00000486078 ARHGEF40Q8TER5 1519 aa8.6□□□□□ -1.03
GTF2B-206ENST00000486078 PREX1Q8TCU6 1659 aa8.6□□□□□ -1.03
GTF2B-206ENST00000486078 FANCAO15360 1455 aa8.6□□□□□ -1.03
GTF2B-206ENST00000486078 TTLL13PA6NNM8 815 aa8.6□□□□□ -1.03
GTF2B-206ENST00000486078 CEBPAP49715 358 aaPredicted RBP8.6□□□□□ -1.03
GTF2B-206ENST00000486078 ATN1P54259 1190 aaPredicted RBP8.6□□□□□ -1.03
GTF2B-206ENST00000486078 ABCA9Q8IUA7 1624 aa8.59□□□□□ -1.03
GTF2B-206ENST00000486078 FER1L4A9Z1Z3 1794 aa8.59□□□□□ -1.03
GTF2B-206ENST00000486078 UBAP1LF5GYI3 381 aa8.59□□□□□ -1.03
GTF2B-206ENST00000486078 PELP1Q8IZL8 1130 aaKnown RBP8.59□□□□□ -1.03
GTF2B-206ENST00000486078 TMEM106CQ9BVX2 250 aa8.59□□□□□ -1.03
GTF2B-206ENST00000486078 PTPRTO14522 1441 aa8.59□□□□□ -1.03
GTF2B-206ENST00000486078 LTBP4Q8N2S1 1624 aa8.58□□□□□ -1.04
GTF2B-206ENST00000486078 IQSEC2Q5JU85 1478 aa8.58□□□□□ -1.04
GTF2B-206ENST00000486078 AKNAQ7Z591 1439 aa8.58□□□□□ -1.04
GTF2B-206ENST00000486078 GTPBP6O43824 516 aaPredicted RBP8.58□□□□□ -1.04
GTF2B-206ENST00000486078 C7P10643 843 aa8.58□□□□□ -1.04
GTF2B-206ENST00000486078 LMOD2Q6P5Q4 547 aa8.58□□□□□ -1.04
GTF2B-206ENST00000486078 TTC37Q6PGP7 1564 aa8.57□□□□□ -1.04
GTF2B-206ENST00000486078 UBTFP17480 764 aaKnown RBP8.57□□□□□ -1.04
GTF2B-206ENST00000486078 PSEN1P49768 467 aa8.57□□□□□ -1.04
GTF2B-206ENST00000486078 PDAP1Q13442 181 aaKnown RBP8.57□□□□□ -1.04
GTF2B-206ENST00000486078 SLC39A7Q92504 469 aa8.57□□□□□ -1.04
GTF2B-206ENST00000486078 SIGLEC1Q9BZZ2 1709 aa8.57□□□□□ -1.04
GTF2B-206ENST00000486078 DENND4BO75064 1496 aaPredicted RBP8.57□□□□□ -1.04
GTF2B-206ENST00000486078 RIOK3O14730 519 aaKnown RBP8.56□□□□□ -1.04
GTF2B-206ENST00000486078 TRIM26Q12899 539 aaPredicted RBP8.56□□□□□ -1.04
GTF2B-206ENST00000486078 NKX1-1Q15270 411 aaPredicted RBP8.56□□□□□ -1.04
GTF2B-206ENST00000486078 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.56□□□□□ -1.04
GTF2B-206ENST00000486078 ATP10BO94823 1461 aa8.56□□□□□ -1.04
GTF2B-206ENST00000486078 UHRF1BP1Q6BDS2 1440 aa8.55□□□□□ -1.04
GTF2B-206ENST00000486078 RICTORQ6R327 1708 aa8.55□□□□□ -1.04
GTF2B-206ENST00000486078 FAM9AQ8IZU1 332 aaPredicted RBP8.55□□□□□ -1.04
GTF2B-206ENST00000486078 GOLGA3Q08378 1498 aa8.55□□□□□ -1.04
GTF2B-206ENST00000486078 RAPGEF2Q9Y4G8 1499 aa8.55□□□□□ -1.04
GTF2B-206ENST00000486078 MED1Q15648 1581 aaPredicted RBP8.55□□□□□ -1.04
GTF2B-206ENST00000486078 NEUROD2Q15784 382 aa8.54□□□□□ -1.04
GTF2B-206ENST00000486078 TRIM35Q9UPQ4 493 aa8.54□□□□□ -1.04
GTF2B-206ENST00000486078 ZFYVE16Q7Z3T8 1539 aa8.54□□□□□ -1.04
GTF2B-206ENST00000486078 FHOD3Q2V2M9 1422 aa8.54□□□□□ -1.04
GTF2B-206ENST00000486078 VGFO15240 615 aaPredicted RBP8.52□□□□□ -1.05
GTF2B-206ENST00000486078 IER5LQ5T953 404 aa8.52□□□□□ -1.05
GTF2B-206ENST00000486078 RNF25Q96BH1 459 aaPredicted RBP8.52□□□□□ -1.05
GTF2B-206ENST00000486078 METRNQ9UJH8 293 aa8.52□□□□□ -1.05
GTF2B-206ENST00000486078 EFCAB5A4FU69 1503 aa8.52□□□□□ -1.05
GTF2B-206ENST00000486078 ARHGEF12Q9NZN5 1544 aa8.52□□□□□ -1.05
GTF2B-206ENST00000486078 HSPA1LP34931 641 aa8.51□□□□□ -1.05
GTF2B-206ENST00000486078 RYDENQ9NUL5 291 aaKnown RBP8.51□□□□□ -1.05
GTF2B-206ENST00000486078 MAGI2Q86UL8 1455 aa8.5□□□□□ -1.05
GTF2B-206ENST00000486078 SETD1BQ9UPS6 1966 aaKnown RBP8.5□□□□□ -1.05
GTF2B-206ENST00000486078 ZMYM4Q5VZL5 1548 aa8.49□□□□□ -1.05
GTF2B-206ENST00000486078 PIP4K2BP78356 416 aa8.49□□□□□ -1.05
GTF2B-206ENST00000486078 GOLGA2Q08379 1002 aa8.49□□□□□ -1.05
GTF2B-206ENST00000486078 LHX8Q68G74 356 aa8.49□□□□□ -1.05
GTF2B-206ENST00000486078 CTTNBP2Q8WZ74 1663 aa8.49□□□□□ -1.05
GTF2B-206ENST00000486078 ZNF335Q9H4Z2 1342 aaPredicted RBP8.49□□□□□ -1.05
GTF2B-206ENST00000486078 HECW1Q76N89 1606 aa8.48□□□□□ -1.05
GTF2B-206ENST00000486078 CFAP74Q9C0B2 1584 aa8.48□□□□□ -1.05
GTF2B-206ENST00000486078 NCOA1Q15788 1441 aa8.47□□□□□ -1.05
GTF2B-206ENST00000486078 ATP10AO60312 1499 aa8.47□□□□□ -1.05
GTF2B-206ENST00000486078 SEC24BO95487 1268 aa8.47□□□□□ -1.05
GTF2B-206ENST00000486078 NCKAP5LQ9HCH0 1330 aa8.47□□□□□ -1.05
GTF2B-206ENST00000486078 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.46□□□□□ -1.06
GTF2B-206ENST00000486078 MKRN3Q13064 507 aaKnown RBP8.46□□□□□ -1.06
GTF2B-206ENST00000486078 ZFP91Q96JP5 570 aaPredicted RBP8.46□□□□□ -1.06
GTF2B-206ENST00000486078 C9orf84Q5VXU9 1444 aa8.46□□□□□ -1.06
GTF2B-206ENST00000486078 STK25O00506 426 aa8.45□□□□□ -1.06
GTF2B-206ENST00000486078 HRCP23327 699 aa8.45□□□□□ -1.06
GTF2B-206ENST00000486078 WDR70Q9NW82 654 aa8.45□□□□□ -1.06
GTF2B-206ENST00000486078 POTEFA5A3E0 1075 aa8.44□□□□□ -1.06
GTF2B-206ENST00000486078 PLEKHD1A6NEE1 506 aa8.44□□□□□ -1.06
GTF2B-206ENST00000486078 TOM1O60784 492 aa8.44□□□□□ -1.06
GTF2B-206ENST00000486078 IRX5P78411 483 aaPredicted RBP8.44□□□□□ -1.06
GTF2B-206ENST00000486078 ZMYND15Q9H091 742 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms