RNA–Protein interactions for RNA: ENST00000485984.1

ARHGEF16-207, Transcript of Rho guanine nucleotide exchange factor 16, humanhuman

TSL 2

Gene ARHGEF16, Length 2,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF16-207ENST00000485984 ARHGEF5Q12774 1597 aa23.76■■□□□ 1.39
ARHGEF16-207ENST00000485984 MYBBP1AQ9BQG0 1328 aaKnown RBP23.76■■□□□ 1.39
ARHGEF16-207ENST00000485984 RALBP1Q15311 655 aa23.74■■□□□ 1.39
ARHGEF16-207ENST00000485984 BRD4O60885 1362 aaPredicted RBP23.73■■□□□ 1.39
ARHGEF16-207ENST00000485984 CCDC141Q6ZP82 1450 aa23.73■■□□□ 1.39
ARHGEF16-207ENST00000485984 FAM135AQ9P2D6 1515 aa23.73■■□□□ 1.39
ARHGEF16-207ENST00000485984 CHD1O14646 1710 aa23.72■■□□□ 1.39
ARHGEF16-207ENST00000485984 KTN1Q86UP2 1357 aaKnown RBP23.72■■□□□ 1.39
ARHGEF16-207ENST00000485984 RGL3Q3MIN7 710 aa23.71■■□□□ 1.39
ARHGEF16-207ENST00000485984 LRPPRCP42704 1394 aaKnown RBP23.71■■□□□ 1.39
ARHGEF16-207ENST00000485984 SAMD9LQ8IVG5 1584 aa23.71■■□□□ 1.39
ARHGEF16-207ENST00000485984 CCDC144AA2RUR9 1427 aa23.69■■□□□ 1.38
ARHGEF16-207ENST00000485984 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.67■■□□□ 1.382e-6■□□□□ 11
ARHGEF16-207ENST00000485984 E9PCH4 1651 aa23.67■■□□□ 1.38
ARHGEF16-207ENST00000485984 CDC42BPBQ9Y5S2 1711 aa23.67■■□□□ 1.38
ARHGEF16-207ENST00000485984 RSPH4AQ5TD94 716 aa23.66■■□□□ 1.38
ARHGEF16-207ENST00000485984 PREX2Q70Z35 1606 aa23.66■■□□□ 1.38
ARHGEF16-207ENST00000485984 PRAG1Q86YV5 1406 aa23.66■■□□□ 1.38
ARHGEF16-207ENST00000485984 SALL2Q9Y467 1007 aaPredicted RBP23.65■■□□□ 1.38
ARHGEF16-207ENST00000485984 NBPF1Q3BBV0 1214 aa23.64■■□□□ 1.38
ARHGEF16-207ENST00000485984 TRPM1Q7Z4N2 1603 aa23.64■■□□□ 1.37
ARHGEF16-207ENST00000485984 NLRP13Q86W25 1043 aa23.62■■□□□ 1.37
ARHGEF16-207ENST00000485984 BCL11AQ9H165 835 aa23.62■■□□□ 1.37
ARHGEF16-207ENST00000485984 SYCP2Q9BX26 1530 aa23.62■■□□□ 1.37
ARHGEF16-207ENST00000485984 ARHGAP5Q13017 1502 aa23.6■■□□□ 1.37
ARHGEF16-207ENST00000485984 PARD3Q8TEW0 1356 aa23.59■■□□□ 1.37
ARHGEF16-207ENST00000485984 RRP1P56182 461 aaKnown RBP23.58■■□□□ 1.36
ARHGEF16-207ENST00000485984 NOP58Q9Y2X3 529 aaKnown RBP23.58■■□□□ 1.36
ARHGEF16-207ENST00000485984 PLA2R1Q13018 1463 aa23.57■■□□□ 1.36
ARHGEF16-207ENST00000485984 A2MP01023 1474 aa23.56■■□□□ 1.36
ARHGEF16-207ENST00000485984 RCAN3Q9UKA8 241 aa23.56■■□□□ 1.36
ARHGEF16-207ENST00000485984 UNC13BO14795 1591 aa23.56■■□□□ 1.36
ARHGEF16-207ENST00000485984 CC2D1BQ5T0F9 858 aaKnown RBP23.55■■□□□ 1.36
ARHGEF16-207ENST00000485984 TTC37Q6PGP7 1564 aa23.55■■□□□ 1.36
ARHGEF16-207ENST00000485984 PER1O15534 1290 aaPredicted RBP23.54■■□□□ 1.36
ARHGEF16-207ENST00000485984 GPRASP1Q5JY77 1395 aa23.53■■□□□ 1.36
ARHGEF16-207ENST00000485984 ANP32AP39687 249 aaKnown RBP23.53■■□□□ 1.36
ARHGEF16-207ENST00000485984 EXOC6Q8TAG9 804 aa23.53■■□□□ 1.36
ARHGEF16-207ENST00000485984 DISP3Q9P2K9 1392 aa23.52■■□□□ 1.36
ARHGEF16-207ENST00000485984 SHROOM2Q13796 1616 aa23.52■■□□□ 1.36
ARHGEF16-207ENST00000485984 MAST1Q9Y2H9 1570 aa23.52■■□□□ 1.36
ARHGEF16-207ENST00000485984 PLEKHH2Q8IVE3 1493 aa23.52■■□□□ 1.36
ARHGEF16-207ENST00000485984 COL17A1Q9UMD9 1497 aaPredicted RBP23.52■■□□□ 1.36
ARHGEF16-207ENST00000485984 PDE3BQ13370 1112 aa23.51■■□□□ 1.35
ARHGEF16-207ENST00000485984 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.51■■□□□ 1.35
ARHGEF16-207ENST00000485984 PAK3O75914 559 aaPredicted RBP23.5■■□□□ 1.35
ARHGEF16-207ENST00000485984 TESK2Q96S53 571 aa23.5■■□□□ 1.35
ARHGEF16-207ENST00000485984 PANK3Q9H999 370 aa23.49■■□□□ 1.35
ARHGEF16-207ENST00000485984 PRDM15P57071 1507 aaPredicted RBP23.49■■□□□ 1.35
ARHGEF16-207ENST00000485984 ERBINQ96RT1 1412 aa23.48■■□□□ 1.35
ARHGEF16-207ENST00000485984 MYO5CQ9NQX4 1742 aa23.48■■□□□ 1.35
ARHGEF16-207ENST00000485984 IQGAP3Q86VI3 1631 aa23.48■■□□□ 1.35
ARHGEF16-207ENST00000485984 CDCA7LQ96GN5 454 aa23.47■■□□□ 1.35
ARHGEF16-207ENST00000485984 LAMC1P11047 1609 aa23.47■■□□□ 1.35
ARHGEF16-207ENST00000485984 WASHC2CQ9Y4E1 1318 aa23.47■■□□□ 1.35
ARHGEF16-207ENST00000485984 TMF1P82094 1093 aa23.47■■□□□ 1.35
ARHGEF16-207ENST00000485984 PLXNC1O60486 1568 aa23.46■■□□□ 1.35
ARHGEF16-207ENST00000485984 ERCC6L2Q5T890 1561 aa23.46■■□□□ 1.35
ARHGEF16-207ENST00000485984 MYT1LQ9UL68 1186 aa23.45■■□□□ 1.35
ARHGEF16-207ENST00000485984 EIF2AK4Q9P2K8 1649 aaKnown RBP23.45■■□□□ 1.35
ARHGEF16-207ENST00000485984 IPO9Q96P70 1041 aaKnown RBP23.45■■□□□ 1.34
ARHGEF16-207ENST00000485984 NBR1Q14596 966 aa23.43■■□□□ 1.34
ARHGEF16-207ENST00000485984 DUOX2Q9NRD8 1548 aa23.43■■□□□ 1.34
ARHGEF16-207ENST00000485984 ZBTB47Q9UFB7 747 aaPredicted RBP23.39■■□□□ 1.34
ARHGEF16-207ENST00000485984 ATP10AO60312 1499 aa23.38■■□□□ 1.33
ARHGEF16-207ENST00000485984 BLMP54132 1417 aaPredicted RBP23.38■■□□□ 1.33
ARHGEF16-207ENST00000485984 CLASP1Q7Z460 1538 aa23.38■■□□□ 1.33
ARHGEF16-207ENST00000485984 ABCC2Q92887 1545 aa23.37■■□□□ 1.33
ARHGEF16-207ENST00000485984 TCERG1O14776 1098 aaKnown RBP23.37■■□□□ 1.33
ARHGEF16-207ENST00000485984 PLIN1O60240 522 aa23.37■■□□□ 1.33
ARHGEF16-207ENST00000485984 MAGI2Q86UL8 1455 aa23.36■■□□□ 1.33
ARHGEF16-207ENST00000485984 DEKP35659 375 aaKnown RBP23.36■■□□□ 1.33
ARHGEF16-207ENST00000485984 NPM2Q86SE8 214 aaKnown RBP23.35■■□□□ 1.33
ARHGEF16-207ENST00000485984 EFCAB2Q5VUJ9 269 aa23.34■■□□□ 1.33
ARHGEF16-207ENST00000485984 INSRP06213 1382 aa23.34■■□□□ 1.33
ARHGEF16-207ENST00000485984 ZMYM4Q5VZL5 1548 aa23.32■■□□□ 1.32
ARHGEF16-207ENST00000485984 RNF17Q9BXT8 1623 aaKnown RBP23.32■■□□□ 1.32
ARHGEF16-207ENST00000485984 PLCH2O75038 1416 aa23.32■■□□□ 1.32
ARHGEF16-207ENST00000485984 KNSTRNQ9Y448 316 aa23.31■■□□□ 1.32
ARHGEF16-207ENST00000485984 ADAMTS8Q9UP79 889 aa23.31■■□□□ 1.32
ARHGEF16-207ENST00000485984 PDE4AP27815 886 aa23.3■■□□□ 1.32
ARHGEF16-207ENST00000485984 CRBNQ96SW2 442 aa23.29■■□□□ 1.32
ARHGEF16-207ENST00000485984 TRAPPC8Q9Y2L5 1435 aa23.28■■□□□ 1.32
ARHGEF16-207ENST00000485984 WDR43Q15061 677 aaKnown RBP eCLIP23.27■■□□□ 1.32
ARHGEF16-207ENST00000485984 WDR7Q9Y4E6 1490 aa23.27■■□□□ 1.31
ARHGEF16-207ENST00000485984 PPP2R1AP30153 589 aa23.26■■□□□ 1.31
ARHGEF16-207ENST00000485984 MS4A1P11836 297 aa23.26■■□□□ 1.31
ARHGEF16-207ENST00000485984 MADDQ8WXG6 1647 aa23.25■■□□□ 1.31
ARHGEF16-207ENST00000485984 SPAG9O60271 1321 aaKnown RBP23.25■■□□□ 1.31
ARHGEF16-207ENST00000485984 ABCC1P33527 1531 aa23.25■■□□□ 1.31
ARHGEF16-207ENST00000485984 BACH2Q9BYV9 841 aa23.25■■□□□ 1.31
ARHGEF16-207ENST00000485984 ZCCHC11Q5TAX3 1644 aaKnown RBP23.23■■□□□ 1.31
ARHGEF16-207ENST00000485984 CDCA8Q53HL2 280 aa23.23■■□□□ 1.31
ARHGEF16-207ENST00000485984 RTL5Q5HYW3 569 aaPredicted RBP23.23■■□□□ 1.31
ARHGEF16-207ENST00000485984 IQGAP1P46940 1657 aa23.22■■□□□ 1.31
ARHGEF16-207ENST00000485984 AFAP1Q8N556 730 aa23.21■■□□□ 1.31
ARHGEF16-207ENST00000485984 AMER1Q5JTC6 1135 aaPredicted RBP23.21■■□□□ 1.31
ARHGEF16-207ENST00000485984 C20orf194Q5TEA3 1177 aa23.2■■□□□ 1.3
ARHGEF16-207ENST00000485984 TRPM2O94759 1503 aa23.19■■□□□ 1.3
ARHGEF16-207ENST00000485984 SCAF11Q99590 1463 aaKnown RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms