RNA–Protein interactions for RNA: ENST00000485962.5

SGSM3-213, Transcript of small G protein signaling modulator 3, humanhuman

TSL 5

Gene SGSM3, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-213ENST00000485962 CDC42BPAQ5VT25 1732 aa16.67■□□□□ 0.26
SGSM3-213ENST00000485962 C9orf84Q5VXU9 1444 aa16.67■□□□□ 0.26
SGSM3-213ENST00000485962 KDM5CP41229 1560 aa16.66■□□□□ 0.26
SGSM3-213ENST00000485962 FANCIQ9NVI1 1328 aa16.66■□□□□ 0.26
SGSM3-213ENST00000485962 TMC1Q8TDI8 760 aa16.64■□□□□ 0.25
SGSM3-213ENST00000485962 DHX37Q8IY37 1157 aaKnown RBP16.63■□□□□ 0.25
SGSM3-213ENST00000485962 HNRNPMP52272 730 aaKnown RBP eCLIP16.63■□□□□ 0.253e-6■■■■□ 21.8
SGSM3-213ENST00000485962 ARID4BQ4LE39 1312 aaPredicted RBP16.63■□□□□ 0.25
SGSM3-213ENST00000485962 DCAF11Q8TEB1 546 aa16.62■□□□□ 0.25
SGSM3-213ENST00000485962 NUP160Q12769 1436 aa16.62■□□□□ 0.25
SGSM3-213ENST00000485962 RALGAPBQ86X10 1494 aa16.62■□□□□ 0.25
SGSM3-213ENST00000485962 ROCK2O75116 1388 aaKnown RBP16.61■□□□□ 0.25
SGSM3-213ENST00000485962 ATP10BO94823 1461 aa16.61■□□□□ 0.25
SGSM3-213ENST00000485962 SMG6Q86US8 1419 aaKnown RBP16.61■□□□□ 0.25
SGSM3-213ENST00000485962 NUDCQ9Y266 331 aa16.61■□□□□ 0.25
SGSM3-213ENST00000485962 SHANK2Q9UPX8 1470 aa16.61■□□□□ 0.25
SGSM3-213ENST00000485962 KIF15Q9NS87 1388 aa16.61■□□□□ 0.25
SGSM3-213ENST00000485962 ST20-MTHFSA0A0A6YYL1 179 aa16.6■□□□□ 0.25
SGSM3-213ENST00000485962 ZMYND15Q9H091 742 aa16.6■□□□□ 0.25
SGSM3-213ENST00000485962 ABCC10Q5T3U5 1492 aa16.6■□□□□ 0.25
SGSM3-213ENST00000485962 UHRF1BP1Q6BDS2 1440 aa16.6■□□□□ 0.25
SGSM3-213ENST00000485962 ABCA8O94911 1581 aa16.59■□□□□ 0.25
SGSM3-213ENST00000485962 AAMPQ13685 434 aa16.58■□□□□ 0.24
SGSM3-213ENST00000485962 ARHGEF12Q9NZN5 1544 aa16.58■□□□□ 0.24
SGSM3-213ENST00000485962 PNISRQ8TF01 805 aaKnown RBP16.57■□□□□ 0.24
SGSM3-213ENST00000485962 RBM10P98175 930 aaKnown RBP16.55■□□□□ 0.24
SGSM3-213ENST00000485962 KDM5DQ9BY66 1539 aa16.54■□□□□ 0.24
SGSM3-213ENST00000485962 RGL3Q3MIN7 710 aa16.52■□□□□ 0.24
SGSM3-213ENST00000485962 MYBBP1AQ9BQG0 1328 aaKnown RBP16.52■□□□□ 0.23
SGSM3-213ENST00000485962 PTPRGP23470 1445 aa16.51■□□□□ 0.23
SGSM3-213ENST00000485962 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.51■□□□□ 0.23
SGSM3-213ENST00000485962 CCDC141Q6ZP82 1450 aa16.51■□□□□ 0.23
SGSM3-213ENST00000485962 ARHGEF5Q12774 1597 aa16.51■□□□□ 0.23
SGSM3-213ENST00000485962 RALBP1Q15311 655 aa16.5■□□□□ 0.23
SGSM3-213ENST00000485962 IL27Q8NEV9 243 aa16.5■□□□□ 0.23
SGSM3-213ENST00000485962 FAM135AQ9P2D6 1515 aa16.5■□□□□ 0.23
SGSM3-213ENST00000485962 CCDC144AA2RUR9 1427 aa16.49■□□□□ 0.23
SGSM3-213ENST00000485962 BRD4O60885 1362 aaPredicted RBP16.49■□□□□ 0.23
SGSM3-213ENST00000485962 SAMD9LQ8IVG5 1584 aa16.49■□□□□ 0.23
SGSM3-213ENST00000485962 TAF7LQ5H9L4 462 aa16.48■□□□□ 0.23
SGSM3-213ENST00000485962 CDC42BPBQ9Y5S2 1711 aa16.48■□□□□ 0.23
SGSM3-213ENST00000485962 RNF123Q5XPI4 1314 aa16.48■□□□□ 0.23
SGSM3-213ENST00000485962 PAXIP1Q6ZW49 1069 aaPredicted RBP16.47■□□□□ 0.23
SGSM3-213ENST00000485962 CHMP4AQ9BY43 222 aa16.47■□□□□ 0.23
SGSM3-213ENST00000485962 KTN1Q86UP2 1357 aaKnown RBP16.46■□□□□ 0.23
SGSM3-213ENST00000485962 VSIG10Q8N0Z9 540 aa16.46■□□□□ 0.23
SGSM3-213ENST00000485962 HAP1P54257 671 aaPredicted RBP16.46■□□□□ 0.23
SGSM3-213ENST00000485962 RSPH4AQ5TD94 716 aa16.46■□□□□ 0.23
SGSM3-213ENST00000485962 PREX2Q70Z35 1606 aa16.45■□□□□ 0.22
SGSM3-213ENST00000485962 LRPPRCP42704 1394 aaKnown RBP16.45■□□□□ 0.22
SGSM3-213ENST00000485962 NBPF1Q3BBV0 1214 aa16.45■□□□□ 0.22
SGSM3-213ENST00000485962 E9PCH4 1651 aa16.44■□□□□ 0.22
SGSM3-213ENST00000485962 PRAG1Q86YV5 1406 aa16.44■□□□□ 0.22
SGSM3-213ENST00000485962 SYCP2Q9BX26 1530 aa16.44■□□□□ 0.22
SGSM3-213ENST00000485962 ARHGAP5Q13017 1502 aa16.43■□□□□ 0.22
SGSM3-213ENST00000485962 TRPM1Q7Z4N2 1603 aa16.43■□□□□ 0.22
SGSM3-213ENST00000485962 NLRP13Q86W25 1043 aa16.43■□□□□ 0.22
SGSM3-213ENST00000485962 CC2D1BQ5T0F9 858 aaKnown RBP16.4■□□□□ 0.22
SGSM3-213ENST00000485962 RRP1P56182 461 aaKnown RBP16.39■□□□□ 0.21
SGSM3-213ENST00000485962 NOP58Q9Y2X3 529 aaKnown RBP16.39■□□□□ 0.21
SGSM3-213ENST00000485962 RCAN3Q9UKA8 241 aa16.38■□□□□ 0.21
SGSM3-213ENST00000485962 TTC37Q6PGP7 1564 aa16.38■□□□□ 0.21
SGSM3-213ENST00000485962 PARD3Q8TEW0 1356 aa16.38■□□□□ 0.21
SGSM3-213ENST00000485962 A2MP01023 1474 aa16.38■□□□□ 0.21
SGSM3-213ENST00000485962 ANP32AP39687 249 aaKnown RBP16.37■□□□□ 0.21
SGSM3-213ENST00000485962 PLA2R1Q13018 1463 aa16.36■□□□□ 0.21
SGSM3-213ENST00000485962 PLEKHH2Q8IVE3 1493 aa16.36■□□□□ 0.21
SGSM3-213ENST00000485962 UNC13BO14795 1591 aa16.36■□□□□ 0.21
SGSM3-213ENST00000485962 MYO5CQ9NQX4 1742 aa16.35■□□□□ 0.21
SGSM3-213ENST00000485962 PER1O15534 1290 aaPredicted RBP16.35■□□□□ 0.21
SGSM3-213ENST00000485962 HOMEZQ8IX15 550 aa16.35■□□□□ 0.21
SGSM3-213ENST00000485962 EXOC6Q8TAG9 804 aa16.35■□□□□ 0.21
SGSM3-213ENST00000485962 DISP3Q9P2K9 1392 aa16.35■□□□□ 0.21
SGSM3-213ENST00000485962 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.35■□□□□ 0.21
SGSM3-213ENST00000485962 PANK3Q9H999 370 aa16.35■□□□□ 0.21
SGSM3-213ENST00000485962 COL17A1Q9UMD9 1497 aaPredicted RBP16.34■□□□□ 0.21
SGSM3-213ENST00000485962 TMF1P82094 1093 aa16.34■□□□□ 0.21
SGSM3-213ENST00000485962 MAST1Q9Y2H9 1570 aa16.33■□□□□ 0.21
SGSM3-213ENST00000485962 GPRASP1Q5JY77 1395 aa16.33■□□□□ 0.21
SGSM3-213ENST00000485962 CHD1O14646 1710 aa16.33■□□□□ 0.2
SGSM3-213ENST00000485962 PDE3BQ13370 1112 aa16.33■□□□□ 0.2
SGSM3-213ENST00000485962 TESK2Q96S53 571 aa16.33■□□□□ 0.2
SGSM3-213ENST00000485962 PAK3O75914 559 aaPredicted RBP16.32■□□□□ 0.2
SGSM3-213ENST00000485962 CDCA7LQ96GN5 454 aa16.32■□□□□ 0.2
SGSM3-213ENST00000485962 ERBINQ96RT1 1412 aa16.32■□□□□ 0.2
SGSM3-213ENST00000485962 IQGAP3Q86VI3 1631 aa16.32■□□□□ 0.2
SGSM3-213ENST00000485962 PRDM15P57071 1507 aaPredicted RBP16.32■□□□□ 0.2
SGSM3-213ENST00000485962 NBR1Q14596 966 aa16.32■□□□□ 0.2
SGSM3-213ENST00000485962 EIF2AK4Q9P2K8 1649 aaKnown RBP16.31■□□□□ 0.2
SGSM3-213ENST00000485962 MYT1LQ9UL68 1186 aa16.3■□□□□ 0.2
SGSM3-213ENST00000485962 PLXNC1O60486 1568 aa16.3■□□□□ 0.2
SGSM3-213ENST00000485962 WASHC2CQ9Y4E1 1318 aa16.29■□□□□ 0.2
SGSM3-213ENST00000485962 DUOX2Q9NRD8 1548 aa16.29■□□□□ 0.2
SGSM3-213ENST00000485962 LAMC1P11047 1609 aa16.29■□□□□ 0.2
SGSM3-213ENST00000485962 IPO9Q96P70 1041 aaKnown RBP16.29■□□□□ 0.2
SGSM3-213ENST00000485962 GLIPR1L2Q4G1C9 344 aa16.28■□□□□ 0.2
SGSM3-213ENST00000485962 ZBTB47Q9UFB7 747 aaPredicted RBP16.27■□□□□ 0.2
SGSM3-213ENST00000485962 SAMD1Q6SPF0 538 aaPredicted RBP16.27■□□□□ 0.19
SGSM3-213ENST00000485962 PLIN1O60240 522 aa16.26■□□□□ 0.19
SGSM3-213ENST00000485962 NPM2Q86SE8 214 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 489.4 ms