RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 SENP3-EIF4A1A0A087X0R7 540 aa30.3■■■□□ 2.44
CLN5-202ENST00000485938 KDM2AQ9Y2K7 1162 aa30.3■■■□□ 2.44
CLN5-202ENST00000485938 RALBP1Q15311 655 aa30.29■■■□□ 2.44
CLN5-202ENST00000485938 TSPY4P0CV99 314 aa30.29■■■□□ 2.44
CLN5-202ENST00000485938 TSPY10P0CW01 314 aa30.29■■■□□ 2.44
CLN5-202ENST00000485938 MYT1LQ9UL68 1186 aa30.28■■■□□ 2.44
CLN5-202ENST00000485938 ARHGEF5Q12774 1597 aa30.28■■■□□ 2.44
CLN5-202ENST00000485938 DCAF11Q8TEB1 546 aa30.28■■■□□ 2.44
CLN5-202ENST00000485938 NOP58Q9Y2X3 529 aaKnown RBP30.27■■■□□ 2.44
CLN5-202ENST00000485938 HNRNPMP52272 730 aaKnown RBP eCLIP30.21■■■□□ 2.43
CLN5-202ENST00000485938 FAM135AQ9P2D6 1515 aa30.19■■■□□ 2.42
CLN5-202ENST00000485938 PAK3O75914 559 aaPredicted RBP30.18■■■□□ 2.42
CLN5-202ENST00000485938 TRPM1Q7Z4N2 1603 aa30.18■■■□□ 2.42
CLN5-202ENST00000485938 PRAG1Q86YV5 1406 aa30.16■■■□□ 2.42
CLN5-202ENST00000485938 CHD1O14646 1710 aa30.16■■■□□ 2.42
CLN5-202ENST00000485938 PARD3Q8TEW0 1356 aa30.15■■■□□ 2.42
CLN5-202ENST00000485938 RRP1P56182 461 aaKnown RBP30.14■■■□□ 2.42
CLN5-202ENST00000485938 CCDC141Q6ZP82 1450 aa30.14■■■□□ 2.42
CLN5-202ENST00000485938 SAMD9LQ8IVG5 1584 aa30.13■■■□□ 2.41
CLN5-202ENST00000485938 NLRP13Q86W25 1043 aa30.13■■■□□ 2.41
CLN5-202ENST00000485938 ANP32AP39687 249 aaKnown RBP30.11■■■□□ 2.41
CLN5-202ENST00000485938 IPO9Q96P70 1041 aaKnown RBP30.1■■■□□ 2.41
CLN5-202ENST00000485938 CDC42BPBQ9Y5S2 1711 aa30.1■■■□□ 2.41
CLN5-202ENST00000485938 CCDC144AA2RUR9 1427 aa30.09■■■□□ 2.41
CLN5-202ENST00000485938 PREX2Q70Z35 1606 aa30.08■■■□□ 2.41
CLN5-202ENST00000485938 RCAN3Q9UKA8 241 aa30.08■■■□□ 2.41
CLN5-202ENST00000485938 GPRASP1Q5JY77 1395 aa30.07■■■□□ 2.4
CLN5-202ENST00000485938 PER1O15534 1290 aaPredicted RBP30.06■■■□□ 2.4
CLN5-202ENST00000485938 PDE3BQ13370 1112 aa30.06■■■□□ 2.4
CLN5-202ENST00000485938 EXOC6Q8TAG9 804 aa30.05■■■□□ 2.4
CLN5-202ENST00000485938 DEKP35659 375 aaKnown RBP30.05■■■□□ 2.4
CLN5-202ENST00000485938 RSPH4AQ5TD94 716 aa30.04■■■□□ 2.4
CLN5-202ENST00000485938 PLA2R1Q13018 1463 aa30.04■■■□□ 2.4
CLN5-202ENST00000485938 LAMC1P11047 1609 aa30.04■■■□□ 2.4
CLN5-202ENST00000485938 NBPF1Q3BBV0 1214 aa30.04■■■□□ 2.4
CLN5-202ENST00000485938 UNC13BO14795 1591 aa30.03■■■□□ 2.4
CLN5-202ENST00000485938 COL17A1Q9UMD9 1497 aaPredicted RBP30.03■■■□□ 2.4
CLN5-202ENST00000485938 A2MP01023 1474 aa30.02■■■□□ 2.4
CLN5-202ENST00000485938 PRDM15P57071 1507 aaPredicted RBP30■■■□□ 2.39
CLN5-202ENST00000485938 MAST1Q9Y2H9 1570 aa29.99■■■□□ 2.39
CLN5-202ENST00000485938 NBR1Q14596 966 aa29.99■■■□□ 2.39
CLN5-202ENST00000485938 SALL2Q9Y467 1007 aaPredicted RBP29.99■■■□□ 2.39
CLN5-202ENST00000485938 WASHC2CQ9Y4E1 1318 aa29.98■■■□□ 2.39
CLN5-202ENST00000485938 RGL3Q3MIN7 710 aa29.98■■■□□ 2.39
CLN5-202ENST00000485938 INSRP06213 1382 aa29.97■■■□□ 2.39
CLN5-202ENST00000485938 TESK2Q96S53 571 aa29.96■■■□□ 2.39
CLN5-202ENST00000485938 SYCP2Q9BX26 1530 aa29.96■■■□□ 2.39
CLN5-202ENST00000485938 ZBTB47Q9UFB7 747 aaPredicted RBP29.96■■■□□ 2.39
CLN5-202ENST00000485938 DISP3Q9P2K9 1392 aa29.96■■■□□ 2.39
CLN5-202ENST00000485938 ZMYM4Q5VZL5 1548 aa29.95■■■□□ 2.39
CLN5-202ENST00000485938 TCERG1O14776 1098 aaKnown RBP29.95■■■□□ 2.39
CLN5-202ENST00000485938 BLMP54132 1417 aaPredicted RBP29.94■■■□□ 2.38
CLN5-202ENST00000485938 IQGAP3Q86VI3 1631 aa29.93■■■□□ 2.38
CLN5-202ENST00000485938 MYO5CQ9NQX4 1742 aa29.93■■■□□ 2.38
CLN5-202ENST00000485938 CDCA7LQ96GN5 454 aa29.92■■■□□ 2.38
CLN5-202ENST00000485938 EIF2AK4Q9P2K8 1649 aaKnown RBP29.92■■■□□ 2.38
CLN5-202ENST00000485938 ERBINQ96RT1 1412 aa29.91■■■□□ 2.38
CLN5-202ENST00000485938 CC2D1BQ5T0F9 858 aaKnown RBP29.89■■■□□ 2.37
CLN5-202ENST00000485938 PLXNC1O60486 1568 aa29.89■■■□□ 2.37
CLN5-202ENST00000485938 TTC37Q6PGP7 1564 aa29.89■■■□□ 2.37
CLN5-202ENST00000485938 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.88■■■□□ 2.37
CLN5-202ENST00000485938 ARHGAP5Q13017 1502 aa29.88■■■□□ 2.37
CLN5-202ENST00000485938 PANK3Q9H999 370 aa29.87■■■□□ 2.37
CLN5-202ENST00000485938 ATP10AO60312 1499 aa29.86■■■□□ 2.37
CLN5-202ENST00000485938 ERCC6L2Q5T890 1561 aa29.86■■■□□ 2.37
CLN5-202ENST00000485938 MS4A1P11836 297 aa29.85■■■□□ 2.37
CLN5-202ENST00000485938 PLEKHH2Q8IVE3 1493 aa29.84■■■□□ 2.37
CLN5-202ENST00000485938 PDE4AP27815 886 aa29.84■■■□□ 2.37
CLN5-202ENST00000485938 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP29.83■■■□□ 2.37
CLN5-202ENST00000485938 SHROOM2Q13796 1616 aa29.82■■■□□ 2.36
CLN5-202ENST00000485938 TMF1P82094 1093 aa29.82■■■□□ 2.36
CLN5-202ENST00000485938 MAGI2Q86UL8 1455 aa29.81■■■□□ 2.36
CLN5-202ENST00000485938 BACH2Q9BYV9 841 aa29.81■■■□□ 2.36
CLN5-202ENST00000485938 RNF17Q9BXT8 1623 aaKnown RBP29.81■■■□□ 2.36
CLN5-202ENST00000485938 DUOX2Q9NRD8 1548 aa29.79■■■□□ 2.36
CLN5-202ENST00000485938 PLIN1O60240 522 aa29.78■■■□□ 2.36
CLN5-202ENST00000485938 NPM2Q86SE8 214 aaKnown RBP29.77■■■□□ 2.36
CLN5-202ENST00000485938 RTL5Q5HYW3 569 aaPredicted RBP29.75■■■□□ 2.35
CLN5-202ENST00000485938 CRBNQ96SW2 442 aa29.73■■■□□ 2.35
CLN5-202ENST00000485938 WDR7Q9Y4E6 1490 aa29.71■■■□□ 2.35
CLN5-202ENST00000485938 ADAMTS8Q9UP79 889 aa29.68■■■□□ 2.34
CLN5-202ENST00000485938 CLASP1Q7Z460 1538 aa29.66■■■□□ 2.34
CLN5-202ENST00000485938 IQGAP1P46940 1657 aa29.66■■■□□ 2.34
CLN5-202ENST00000485938 MADDQ8WXG6 1647 aa29.65■■■□□ 2.34
CLN5-202ENST00000485938 ABCC2Q92887 1545 aa29.63■■■□□ 2.33
CLN5-202ENST00000485938 PPP2R1AP30153 589 aa29.63■■■□□ 2.33
CLN5-202ENST00000485938 C20orf194Q5TEA3 1177 aa29.61■■■□□ 2.33
CLN5-202ENST00000485938 PLEKHH1Q9ULM0 1364 aa29.61■■■□□ 2.33
CLN5-202ENST00000485938 KNSTRNQ9Y448 316 aa29.61■■■□□ 2.33
CLN5-202ENST00000485938 AMER1Q5JTC6 1135 aaPredicted RBP29.6■■■□□ 2.33
CLN5-202ENST00000485938 SKAP1Q86WV1 359 aa29.6■■■□□ 2.33
CLN5-202ENST00000485938 SYNMO15061 1565 aa29.58■■■□□ 2.33
CLN5-202ENST00000485938 KDM2BQ8NHM5 1336 aa29.58■■■□□ 2.33
CLN5-202ENST00000485938 PLCH2O75038 1416 aa29.58■■■□□ 2.33
CLN5-202ENST00000485938 DUSP27Q5VZP5 1158 aa29.58■■■□□ 2.33
CLN5-202ENST00000485938 ZNF521Q96K83 1311 aa29.58■■■□□ 2.33
CLN5-202ENST00000485938 WDR43Q15061 677 aaKnown RBP eCLIP29.56■■■□□ 2.32
CLN5-202ENST00000485938 SPHKAPQ2M3C7 1700 aa29.55■■■□□ 2.32
CLN5-202ENST00000485938 ABCC1P33527 1531 aa29.54■■■□□ 2.32
CLN5-202ENST00000485938 LAS1LQ9Y4W2 734 aaKnown RBP29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms