RNA–Protein interactions for RNA: ENST00000485556.5

STRC-211, Transcript of stereocilin, humanhuman

TSL 5

Gene STRC, Length 4,253 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-211ENST00000485556 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.83□□□□□ -0.36
STRC-211ENST00000485556 HECW1Q76N89 1606 aa12.83□□□□□ -0.36
STRC-211ENST00000485556 ERICH6BQ5W0A0 696 aa12.82□□□□□ -0.36
STRC-211ENST00000485556 C9orf84Q5VXU9 1444 aa12.82□□□□□ -0.36
STRC-211ENST00000485556 PCF11O94913 1555 aaKnown RBP12.82□□□□□ -0.36
STRC-211ENST00000485556 WASHC2AQ641Q2 1341 aa12.82□□□□□ -0.36
STRC-211ENST00000485556 ANP32BQ92688 251 aaKnown RBP12.82□□□□□ -0.36
STRC-211ENST00000485556 CHMP4BQ9H444 224 aaKnown RBP12.82□□□□□ -0.36
STRC-211ENST00000485556 IQGAP2Q13576 1575 aa12.82□□□□□ -0.36
STRC-211ENST00000485556 MINK1Q8N4C8 1332 aaPredicted RBP12.81□□□□□ -0.36
STRC-211ENST00000485556 RTF1Q92541 710 aaKnown RBP12.81□□□□□ -0.36
STRC-211ENST00000485556 PDE3BQ13370 1112 aa12.8□□□□□ -0.36
STRC-211ENST00000485556 NBPF8Q3BBV2 869 aa12.79□□□□□ -0.36
STRC-211ENST00000485556 NGDNQ8NEJ9 315 aaKnown RBP12.79□□□□□ -0.36
STRC-211ENST00000485556 BIVM-ERCC5R4GMW8 1640 aa12.79□□□□□ -0.36
STRC-211ENST00000485556 EVC2Q86UK5 1308 aa12.79□□□□□ -0.36
STRC-211ENST00000485556 RRP7AQ9Y3A4 280 aaKnown RBP12.79□□□□□ -0.36
STRC-211ENST00000485556 RBM19Q9Y4C8 960 aaKnown RBP12.79□□□□□ -0.36
STRC-211ENST00000485556 NAIPQ13075 1403 aa12.79□□□□□ -0.36
STRC-211ENST00000485556 ZNF608Q9ULD9 1512 aaPredicted RBP12.79□□□□□ -0.36
STRC-211ENST00000485556 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.78□□□□□ -0.36
STRC-211ENST00000485556 DAPK1P53355 1430 aa12.78□□□□□ -0.36
STRC-211ENST00000485556 CUL7Q14999 1698 aa12.78□□□□□ -0.36
STRC-211ENST00000485556 PLB1Q6P1J6 1458 aa12.78□□□□□ -0.36
STRC-211ENST00000485556 ZBED9Q6R2W3 1325 aa12.77□□□□□ -0.37
STRC-211ENST00000485556 CLUAP1Q96AJ1 413 aa12.77□□□□□ -0.37
STRC-211ENST00000485556 KIAA1107Q9UPP5 1409 aa12.77□□□□□ -0.37
STRC-211ENST00000485556 SUPT6HQ7KZ85 1726 aaKnown RBP12.77□□□□□ -0.37
STRC-211ENST00000485556 IPO8O15397 1037 aaKnown RBP12.76□□□□□ -0.37
STRC-211ENST00000485556 GRIN2AQ12879 1464 aa12.76□□□□□ -0.37
STRC-211ENST00000485556 CGNL1Q0VF96 1302 aa12.76□□□□□ -0.37
STRC-211ENST00000485556 CENPJQ9HC77 1338 aaPredicted RBP12.76□□□□□ -0.37
STRC-211ENST00000485556 NBPF1Q3BBV0 1214 aa12.76□□□□□ -0.37
STRC-211ENST00000485556 STAC3Q96MF2 364 aa12.76□□□□□ -0.37
STRC-211ENST00000485556 CALD1Q05682 793 aaKnown RBP12.76□□□□□ -0.37
STRC-211ENST00000485556 CFAP70Q5T0N1 1121 aa12.76□□□□□ -0.37
STRC-211ENST00000485556 TMEM132EQ6IEE7 984 aa12.76□□□□□ -0.37
STRC-211ENST00000485556 SCAPERQ9BY12 1400 aa12.76□□□□□ -0.37
STRC-211ENST00000485556 CNTLNQ9NXG0 1405 aa12.75□□□□□ -0.37
STRC-211ENST00000485556 CASC1Q6TDU7 716 aa12.75□□□□□ -0.37
STRC-211ENST00000485556 SMC4Q9NTJ3 1288 aa12.75□□□□□ -0.37
STRC-211ENST00000485556 NOP58Q9Y2X3 529 aaKnown RBP12.74□□□□□ -0.37
STRC-211ENST00000485556 ITPRIPQ8IWB1 547 aa12.74□□□□□ -0.37
STRC-211ENST00000485556 APAF1O14727 1248 aa12.74□□□□□ -0.37
STRC-211ENST00000485556 OS9Q13438 667 aaPredicted RBP12.74□□□□□ -0.37
STRC-211ENST00000485556 ANP32EQ9BTT0 268 aa12.73□□□□□ -0.37
STRC-211ENST00000485556 ARHGEF11O15085 1522 aa12.72□□□□□ -0.37
STRC-211ENST00000485556 AMPHP49418 695 aa12.72□□□□□ -0.37
STRC-211ENST00000485556 MAGI1Q96QZ7 1491 aaPredicted RBP12.72□□□□□ -0.37
STRC-211ENST00000485556 APBB1O00213 710 aa12.72□□□□□ -0.37
STRC-211ENST00000485556 LTV1Q96GA3 475 aaPredicted RBP12.72□□□□□ -0.37
STRC-211ENST00000485556 PLEKHH2Q8IVE3 1493 aa12.72□□□□□ -0.37
STRC-211ENST00000485556 MAP3K1Q13233 1512 aa12.71□□□□□ -0.37
STRC-211ENST00000485556 RAPGEF3O95398 923 aa12.71□□□□□ -0.37
STRC-211ENST00000485556 PLIN1O60240 522 aa12.71□□□□□ -0.38
STRC-211ENST00000485556 TSHZ2Q9NRE2 1034 aa12.71□□□□□ -0.38
STRC-211ENST00000485556 CSB-PGBD3P0DP91 1061 aa12.71□□□□□ -0.38
STRC-211ENST00000485556 BCL2L13Q9BXK5 485 aa12.7□□□□□ -0.38
STRC-211ENST00000485556 ROCK1Q13464 1354 aa12.69□□□□□ -0.38
STRC-211ENST00000485556 COG3Q96JB2 828 aa12.69□□□□□ -0.38
STRC-211ENST00000485556 RWDD1Q9H446 243 aaPredicted RBP12.69□□□□□ -0.38
STRC-211ENST00000485556 WDR97A6NE52 1622 aa12.69□□□□□ -0.38
STRC-211ENST00000485556 TCERG1O14776 1098 aaKnown RBP12.68□□□□□ -0.38
STRC-211ENST00000485556 GOLGA6L22H0YM25 854 aa12.68□□□□□ -0.38
STRC-211ENST00000485556 ABCC5O15440 1437 aa12.68□□□□□ -0.38
STRC-211ENST00000485556 ELL2O00472 640 aaPredicted RBP12.67□□□□□ -0.38
STRC-211ENST00000485556 CABP2Q9NPB3 220 aa12.67□□□□□ -0.38
STRC-211ENST00000485556 RRP1P56182 461 aaKnown RBP12.66□□□□□ -0.38
STRC-211ENST00000485556 LMOD3Q0VAK6 560 aa12.66□□□□□ -0.38
STRC-211ENST00000485556 EXOC6Q8TAG9 804 aa12.66□□□□□ -0.38
STRC-211ENST00000485556 STK31Q9BXU1 1019 aa12.66□□□□□ -0.38
STRC-211ENST00000485556 E9PSI1 815 aa12.66□□□□□ -0.38
STRC-211ENST00000485556 GGNBP2Q9H3C7 697 aa12.65□□□□□ -0.38
STRC-211ENST00000485556 CAMSAP2Q08AD1 1489 aa12.65□□□□□ -0.38
STRC-211ENST00000485556 PTPN23Q9H3S7 1636 aa12.65□□□□□ -0.38
STRC-211ENST00000485556 HSP90AB1P08238 724 aaKnown RBP12.64□□□□□ -0.39
STRC-211ENST00000485556 NCLP19338 710 aaKnown RBP12.64□□□□□ -0.39
STRC-211ENST00000485556 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.64□□□□□ -0.39
STRC-211ENST00000485556 CCDC141Q6ZP82 1450 aa12.64□□□□□ -0.39
STRC-211ENST00000485556 PMFBP1Q8TBY8 1022 aa12.64□□□□□ -0.39
STRC-211ENST00000485556 DIAPH1O60610 1272 aaKnown RBP12.63□□□□□ -0.39
STRC-211ENST00000485556 SLC4A10Q6U841 1118 aa12.63□□□□□ -0.39
STRC-211ENST00000485556 KCNJ4P48050 445 aa12.63□□□□□ -0.39
STRC-211ENST00000485556 CRBNQ96SW2 442 aa12.62□□□□□ -0.39
STRC-211ENST00000485556 ANKRD30BQ9BXX2 1392 aa12.62□□□□□ -0.39
STRC-211ENST00000485556 NCOA1Q15788 1441 aa12.62□□□□□ -0.39
STRC-211ENST00000485556 ADAMTS8Q9UP79 889 aa12.62□□□□□ -0.39
STRC-211ENST00000485556 BRD4O60885 1362 aaPredicted RBP12.62□□□□□ -0.39
STRC-211ENST00000485556 TPRNQ4KMQ1 711 aa12.62□□□□□ -0.39
STRC-211ENST00000485556 SPRYD3Q8NCJ5 442 aa12.61□□□□□ -0.39
STRC-211ENST00000485556 COG6Q9Y2V7 657 aa12.61□□□□□ -0.39
STRC-211ENST00000485556 HSCBQ8IWL3 235 aa12.61□□□□□ -0.39
STRC-211ENST00000485556 ZNF330Q9Y3S2 320 aaPredicted RBP12.61□□□□□ -0.39
STRC-211ENST00000485556 SLC12A5Q9H2X9 1139 aa12.6□□□□□ -0.39
STRC-211ENST00000485556 AKNAQ7Z591 1439 aa12.6□□□□□ -0.39
STRC-211ENST00000485556 MTHFSP49914 203 aa12.6□□□□□ -0.39
STRC-211ENST00000485556 CCDC184Q52MB2 194 aa12.6□□□□□ -0.39
STRC-211ENST00000485556 NPHP1O15259 732 aa12.59□□□□□ -0.39
STRC-211ENST00000485556 THOC2Q8NI27 1593 aaKnown RBP12.59□□□□□ -0.39
STRC-211ENST00000485556 RIPK4P57078 832 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms