RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 CHD1O14646 1710 aa14.82□□□□□ -0.04
COL8A1-207ENST00000483969 SLC34A2O95436 690 aa14.81□□□□□ -0.04
COL8A1-207ENST00000483969 NUP160Q12769 1436 aa14.81□□□□□ -0.04
COL8A1-207ENST00000483969 RUSC2Q8N2Y8 1516 aa14.81□□□□□ -0.04
COL8A1-207ENST00000483969 ZNF316A6NFI3 1004 aaPredicted RBP14.8□□□□□ -0.04
COL8A1-207ENST00000483969 JPH4Q96JJ6 628 aa14.79□□□□□ -0.04
COL8A1-207ENST00000483969 CHGAP10645 457 aaKnown RBP14.78□□□□□ -0.04
COL8A1-207ENST00000483969 CLASP1Q7Z460 1538 aa14.77□□□□□ -0.04
COL8A1-207ENST00000483969 CYB5RLQ6IPT4 315 aa14.77□□□□□ -0.05
COL8A1-207ENST00000483969 KHSRPQ92945 711 aaKnown RBP eCLIP14.77□□□□□ -0.05
COL8A1-207ENST00000483969 ARHGEF11O15085 1522 aa14.76□□□□□ -0.05
COL8A1-207ENST00000483969 EEA1Q15075 1411 aa14.75□□□□□ -0.05
COL8A1-207ENST00000483969 CUL7Q14999 1698 aa14.74□□□□□ -0.05
COL8A1-207ENST00000483969 FAM9AQ8IZU1 332 aaPredicted RBP14.74□□□□□ -0.05
COL8A1-207ENST00000483969 RYDENQ9NUL5 291 aaKnown RBP14.74□□□□□ -0.05
COL8A1-207ENST00000483969 PCDHGA4Q9Y5G9 962 aa14.74□□□□□ -0.05
COL8A1-207ENST00000483969 RAPGEF2Q9Y4G8 1499 aa14.74□□□□□ -0.05
COL8A1-207ENST00000483969 NUDT7P0C024 238 aa14.73□□□□□ -0.05
COL8A1-207ENST00000483969 CEP170Q5SW79 1584 aa14.72□□□□□ -0.05
COL8A1-207ENST00000483969 KIAA0586Q9BVV6 1533 aa14.71□□□□□ -0.05
COL8A1-207ENST00000483969 PTGER2P43116 358 aa14.7□□□□□ -0.06
COL8A1-207ENST00000483969 RIMBP3CA6NJZ7 1639 aa14.7□□□□□ -0.06
COL8A1-207ENST00000483969 RIMBP3BA6NNM3 1639 aa14.7□□□□□ -0.06
COL8A1-207ENST00000483969 RIMBP3Q9UFD9 1639 aa14.7□□□□□ -0.06
COL8A1-207ENST00000483969 PRG4Q92954 1404 aaPredicted RBP14.67□□□□□ -0.06
COL8A1-207ENST00000483969 FOXK1P85037 733 aa14.67□□□□□ -0.06
COL8A1-207ENST00000483969 RNF166Q96A37 237 aaPredicted RBP14.67□□□□□ -0.06
COL8A1-207ENST00000483969 PRXQ9BXM0 1461 aa14.67□□□□□ -0.06
COL8A1-207ENST00000483969 PBX2P40425 430 aa14.66□□□□□ -0.06
COL8A1-207ENST00000483969 GPHNQ9NQX3 736 aaPredicted RBP14.66□□□□□ -0.06
COL8A1-207ENST00000483969 ARAP1Q96P48 1450 aa14.64□□□□□ -0.07
COL8A1-207ENST00000483969 NKX1-1Q15270 411 aaPredicted RBP14.64□□□□□ -0.07
COL8A1-207ENST00000483969 MYT1LQ9UL68 1186 aa14.64□□□□□ -0.07
COL8A1-207ENST00000483969 LHX6Q9UPM6 363 aa14.64□□□□□ -0.07
COL8A1-207ENST00000483969 PSDA5PKW4 1024 aaPredicted RBP14.62□□□□□ -0.07
COL8A1-207ENST00000483969 PTCD2Q8WV60 388 aaKnown RBP14.62□□□□□ -0.07
COL8A1-207ENST00000483969 CARMIL2Q6F5E8 1435 aa14.61□□□□□ -0.07
COL8A1-207ENST00000483969 LSM11P83369 360 aaKnown RBP eCLIP14.61□□□□□ -0.07
COL8A1-207ENST00000483969 PLPP6Q8IY26 295 aa14.61□□□□□ -0.07
COL8A1-207ENST00000483969 ANKRD13DQ6ZTN6 518 aa14.59□□□□□ -0.07
COL8A1-207ENST00000483969 SHROOM2Q13796 1616 aa14.59□□□□□ -0.07
COL8A1-207ENST00000483969 DSG2Q14126 1118 aa14.58□□□□□ -0.08
COL8A1-207ENST00000483969 UBTFP17480 764 aaKnown RBP14.56□□□□□ -0.08
COL8A1-207ENST00000483969 ERCC6L2Q5T890 1561 aa14.56□□□□□ -0.08
COL8A1-207ENST00000483969 TNIKQ9UKE5 1360 aa14.55□□□□□ -0.08
COL8A1-207ENST00000483969 PTPRGP23470 1445 aa14.55□□□□□ -0.08
COL8A1-207ENST00000483969 IQGAP2Q13576 1575 aa14.55□□□□□ -0.08
COL8A1-207ENST00000483969 KDM4FA0A1W2PPD8 638 aa14.54□□□□□ -0.08
COL8A1-207ENST00000483969 TBC1D12O60347 775 aa14.54□□□□□ -0.08
COL8A1-207ENST00000483969 TTBK1Q5TCY1 1321 aaPredicted RBP14.54□□□□□ -0.08
COL8A1-207ENST00000483969 CRISPLD2Q9H0B8 497 aa14.51□□□□□ -0.09
COL8A1-207ENST00000483969 UGGT2Q9NYU1 1516 aa14.51□□□□□ -0.09
COL8A1-207ENST00000483969 GOLGA3Q08378 1498 aa14.5□□□□□ -0.09
COL8A1-207ENST00000483969 POTEEQ6S8J3 1075 aa14.49□□□□□ -0.09
COL8A1-207ENST00000483969 RANGAP1P46060 587 aaPredicted RBP14.48□□□□□ -0.09
COL8A1-207ENST00000483969 DISP1Q96F81 1524 aa14.47□□□□□ -0.09
COL8A1-207ENST00000483969 ARHGAP33O14559 1287 aa14.47□□□□□ -0.09
COL8A1-207ENST00000483969 P3H3Q8IVL6 736 aa14.47□□□□□ -0.09
COL8A1-207ENST00000483969 AXIN2Q9Y2T1 843 aa14.47□□□□□ -0.09
COL8A1-207ENST00000483969 PPP4R3BQ5MIZ7 849 aa14.46□□□□□ -0.09
COL8A1-207ENST00000483969 KIF21BO75037 1637 aa14.45□□□□□ -0.1
COL8A1-207ENST00000483969 PPP1R15BQ5SWA1 713 aa14.45□□□□□ -0.1
COL8A1-207ENST00000483969 OXER1Q8TDS5 423 aa14.44□□□□□ -0.1
COL8A1-207ENST00000483969 GTPBP6O43824 516 aaPredicted RBP14.43□□□□□ -0.1
COL8A1-207ENST00000483969 UACAQ9BZF9 1416 aa14.41□□□□□ -0.1
COL8A1-207ENST00000483969 PDE4AP27815 886 aa14.41□□□□□ -0.1
COL8A1-207ENST00000483969 NCKAP5LQ9HCH0 1330 aa14.41□□□□□ -0.1
COL8A1-207ENST00000483969 ADGRD1Q6QNK2 874 aa14.4□□□□□ -0.1
COL8A1-207ENST00000483969 CTTNBP2Q8WZ74 1663 aa14.39□□□□□ -0.11
COL8A1-207ENST00000483969 KIAA0556O60303 1618 aa14.38□□□□□ -0.11
COL8A1-207ENST00000483969 TK2O00142 265 aa14.38□□□□□ -0.11
COL8A1-207ENST00000483969 UPF1Q92900 1129 aaKnown RBP eCLIP14.38□□□□□ -0.11
COL8A1-207ENST00000483969 KCNH8Q96L42 1107 aa14.38□□□□□ -0.11
COL8A1-207ENST00000483969 UHRF1BP1LA0JNW5 1464 aa14.37□□□□□ -0.11
COL8A1-207ENST00000483969 ABCC2Q92887 1545 aa14.33□□□□□ -0.12
COL8A1-207ENST00000483969 DDX27Q96GQ7 796 aaKnown RBP14.33□□□□□ -0.12
COL8A1-207ENST00000483969 PSEN2P49810 448 aa14.32□□□□□ -0.12
COL8A1-207ENST00000483969 FAM69CQ0P6D2 419 aa14.32□□□□□ -0.12
COL8A1-207ENST00000483969 PLB1Q6P1J6 1458 aa14.31□□□□□ -0.12
COL8A1-207ENST00000483969 DMRTA1Q5VZB9 504 aa14.31□□□□□ -0.12
COL8A1-207ENST00000483969 ADCY10Q96PN6 1610 aa14.3□□□□□ -0.12
COL8A1-207ENST00000483969 MFSD10Q14728 455 aa14.3□□□□□ -0.12
COL8A1-207ENST00000483969 LARP6Q9BRS8 491 aaKnown RBP14.3□□□□□ -0.12
COL8A1-207ENST00000483969 FHOD3Q2V2M9 1422 aa14.3□□□□□ -0.12
COL8A1-207ENST00000483969 EFCAB5A4FU69 1503 aa14.3□□□□□ -0.12
COL8A1-207ENST00000483969 LOC105371045A0A1W2PR82 267 aa14.29□□□□□ -0.12
COL8A1-207ENST00000483969 ZNF454Q8N9F8 522 aa14.29□□□□□ -0.12
COL8A1-207ENST00000483969 KCNK17Q96T54 332 aa14.29□□□□□ -0.12
COL8A1-207ENST00000483969 SAMD9Q5K651 1589 aa14.29□□□□□ -0.12
COL8A1-207ENST00000483969 KDM5BQ9UGL1 1544 aa14.28□□□□□ -0.12
COL8A1-207ENST00000483969 MAPKBP1O60336 1514 aa14.27□□□□□ -0.12
COL8A1-207ENST00000483969 HRO43593 1189 aa14.27□□□□□ -0.13
COL8A1-207ENST00000483969 ATP1B4Q9UN42 357 aaPredicted RBP14.27□□□□□ -0.13
COL8A1-207ENST00000483969 ARID3CA6NKF2 412 aa14.26□□□□□ -0.13
COL8A1-207ENST00000483969 BCL2L12Q9HB09 334 aa14.26□□□□□ -0.13
COL8A1-207ENST00000483969 ABCA8O94911 1581 aa14.26□□□□□ -0.13
COL8A1-207ENST00000483969 ABCC10Q5T3U5 1492 aa14.25□□□□□ -0.13
COL8A1-207ENST00000483969 ARHGAP35Q9NRY4 1499 aa14.25□□□□□ -0.13
COL8A1-207ENST00000483969 FMN1Q68DA7 1419 aa14.25□□□□□ -0.13
COL8A1-207ENST00000483969 ASXL2Q76L83 1435 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms