RNA–Protein interactions for RNA: ENST00000483731.5

PKD1-216, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,193 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-216ENST00000483731 U2SURPO15042 1029 aaKnown RBP16.28■□□□□ 0.2
PKD1-216ENST00000483731 PTPRKQ15262 1439 aa16.28■□□□□ 0.2
PKD1-216ENST00000483731 PLEKHH2Q8IVE3 1493 aa16.27■□□□□ 0.2
PKD1-216ENST00000483731 WASHC2AQ641Q2 1341 aa16.27■□□□□ 0.2
PKD1-216ENST00000483731 SOX12O15370 315 aa16.27■□□□□ 0.2
PKD1-216ENST00000483731 PANK3Q9H999 370 aa16.27■□□□□ 0.2
PKD1-216ENST00000483731 STAC3Q96MF2 364 aa16.27■□□□□ 0.19
PKD1-216ENST00000483731 UPF2Q9HAU5 1272 aaKnown RBP16.27■□□□□ 0.19
PKD1-216ENST00000483731 TRAK1Q9UPV9 953 aa16.27■□□□□ 0.19
PKD1-216ENST00000483731 NBPF8Q3BBV2 869 aa16.26■□□□□ 0.19
PKD1-216ENST00000483731 ABCC5O15440 1437 aa16.26■□□□□ 0.19
PKD1-216ENST00000483731 ARHGEF11O15085 1522 aa16.25■□□□□ 0.19
PKD1-216ENST00000483731 MYBBP1AQ9BQG0 1328 aaKnown RBP16.25■□□□□ 0.19
PKD1-216ENST00000483731 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.24■□□□□ 0.19
PKD1-216ENST00000483731 CTTNBP2Q8WZ74 1663 aa16.24■□□□□ 0.19
PKD1-216ENST00000483731 VGFO15240 615 aaPredicted RBP16.24■□□□□ 0.19
PKD1-216ENST00000483731 MSH5O43196 834 aa16.23■□□□□ 0.19
PKD1-216ENST00000483731 HDGFL2Q7Z4V5 671 aaPredicted RBP16.23■□□□□ 0.19
PKD1-216ENST00000483731 THOC2Q8NI27 1593 aaKnown RBP16.23■□□□□ 0.19
PKD1-216ENST00000483731 KIF21AQ7Z4S6 1674 aa16.22■□□□□ 0.19
PKD1-216ENST00000483731 MAPKBP1O60336 1514 aa16.22■□□□□ 0.19
PKD1-216ENST00000483731 CAMSAP2Q08AD1 1489 aa16.22■□□□□ 0.19
PKD1-216ENST00000483731 PNNQ9H307 717 aaKnown RBP16.21■□□□□ 0.19
PKD1-216ENST00000483731 CNTLNQ9NXG0 1405 aa16.21■□□□□ 0.18
PKD1-216ENST00000483731 LMOD2Q6P5Q4 547 aa16.2■□□□□ 0.18
PKD1-216ENST00000483731 NUTM2FA1L443 756 aa16.2■□□□□ 0.18
PKD1-216ENST00000483731 RAPGEF3O95398 923 aa16.19■□□□□ 0.18
PKD1-216ENST00000483731 RCAN3Q9UKA8 241 aa16.19■□□□□ 0.18
PKD1-216ENST00000483731 AKNAQ7Z591 1439 aa16.19■□□□□ 0.18
PKD1-216ENST00000483731 FRAT1Q92837 279 aaPredicted RBP16.19■□□□□ 0.18
PKD1-216ENST00000483731 NCOA1Q15788 1441 aa16.19■□□□□ 0.18
PKD1-216ENST00000483731 ADAMTS12P58397 1594 aa16.18■□□□□ 0.18
PKD1-216ENST00000483731 CCDC184Q52MB2 194 aa16.18■□□□□ 0.18
PKD1-216ENST00000483731 ANKRD30BQ9BXX2 1392 aa16.17■□□□□ 0.18
PKD1-216ENST00000483731 SCAPERQ9BY12 1400 aa16.17■□□□□ 0.18
PKD1-216ENST00000483731 FTSJ3Q8IY81 847 aaKnown RBP16.17■□□□□ 0.18
PKD1-216ENST00000483731 ARXQ96QS3 562 aa16.17■□□□□ 0.18
PKD1-216ENST00000483731 CCDC141Q6ZP82 1450 aa16.17■□□□□ 0.18
PKD1-216ENST00000483731 TERF2IPQ9NYB0 399 aa16.17■□□□□ 0.18
PKD1-216ENST00000483731 PDE3BQ13370 1112 aa16.16■□□□□ 0.18
PKD1-216ENST00000483731 UGGT2Q9NYU1 1516 aa16.16■□□□□ 0.18
PKD1-216ENST00000483731 U2AF1L5P0DN76 240 aaPredicted RBP16.16■□□□□ 0.18
PKD1-216ENST00000483731 U2AF1Q01081 240 aaKnown RBP eCLIP16.16■□□□□ 0.18
PKD1-216ENST00000483731 KIF14Q15058 1648 aa16.16■□□□□ 0.18
PKD1-216ENST00000483731 ZBED9Q6R2W3 1325 aa16.15■□□□□ 0.18
PKD1-216ENST00000483731 NUP153P49790 1475 aaKnown RBP16.15■□□□□ 0.18
PKD1-216ENST00000483731 MYH16Q9H6N6 1097 aa16.15■□□□□ 0.18
PKD1-216ENST00000483731 C11orf95C9JLR9 678 aaPredicted RBP16.14■□□□□ 0.17
PKD1-216ENST00000483731 NBPF1Q3BBV0 1214 aa16.14■□□□□ 0.17
PKD1-216ENST00000483731 RAPGEF6Q8TEU7 1601 aa16.13■□□□□ 0.17
PKD1-216ENST00000483731 GPATCH8Q9UKJ3 1502 aaKnown RBP16.13■□□□□ 0.17
PKD1-216ENST00000483731 ANO8Q9HCE9 1232 aaPredicted RBP16.13■□□□□ 0.17
PKD1-216ENST00000483731 TCERG1O14776 1098 aaKnown RBP16.12■□□□□ 0.17
PKD1-216ENST00000483731 ABCA5Q8WWZ7 1642 aa16.12■□□□□ 0.17
PKD1-216ENST00000483731 USP35Q9P2H5 1018 aa16.12■□□□□ 0.17
PKD1-216ENST00000483731 GOLGA2Q08379 1002 aa16.11■□□□□ 0.17
PKD1-216ENST00000483731 EVC2Q86UK5 1308 aa16.11■□□□□ 0.17
PKD1-216ENST00000483731 ATP10BO94823 1461 aa16.11■□□□□ 0.17
PKD1-216ENST00000483731 MS4A1P11836 297 aa16.1■□□□□ 0.17
PKD1-216ENST00000483731 CFAP43Q8NDM7 1665 aa16.1■□□□□ 0.17
PKD1-216ENST00000483731 WDR62O43379 1518 aa16.09■□□□□ 0.17
PKD1-216ENST00000483731 CENPJQ9HC77 1338 aaPredicted RBP16.09■□□□□ 0.17
PKD1-216ENST00000483731 CFAP70Q5T0N1 1121 aa16.09■□□□□ 0.17
PKD1-216ENST00000483731 TMEM132EQ6IEE7 984 aa16.09■□□□□ 0.17
PKD1-216ENST00000483731 CCDC146Q8IYE0 955 aa16.09■□□□□ 0.17
PKD1-216ENST00000483731 EID1Q9Y6B2 187 aa16.08■□□□□ 0.17
PKD1-216ENST00000483731 HSP90AA1P07900 732 aaKnown RBP16.08■□□□□ 0.16
PKD1-216ENST00000483731 KIAA0556O60303 1618 aa16.08■□□□□ 0.16
PKD1-216ENST00000483731 RGS3P49796 1198 aa16.07■□□□□ 0.16
PKD1-216ENST00000483731 EIF4G3O43432 1585 aaKnown RBP16.07■□□□□ 0.16
PKD1-216ENST00000483731 A0A0G2JS52 829 aa16.06■□□□□ 0.16
PKD1-216ENST00000483731 PAK3O75914 559 aaPredicted RBP16.06■□□□□ 0.16
PKD1-216ENST00000483731 BECN1Q14457 450 aa16.06■□□□□ 0.16
PKD1-216ENST00000483731 CGNL1Q0VF96 1302 aa16.05■□□□□ 0.16
PKD1-216ENST00000483731 RPRD2Q5VT52 1461 aaKnown RBP16.04■□□□□ 0.16
PKD1-216ENST00000483731 MINK1Q8N4C8 1332 aaPredicted RBP16.04■□□□□ 0.16
PKD1-216ENST00000483731 PBRM1Q86U86 1689 aa16.02■□□□□ 0.16
PKD1-216ENST00000483731 ANP32BQ92688 251 aaKnown RBP16.02■□□□□ 0.16
PKD1-216ENST00000483731 CHMP4BQ9H444 224 aaKnown RBP16.02■□□□□ 0.16
PKD1-216ENST00000483731 TCOF1Q13428 1488 aaKnown RBP16.02■□□□□ 0.15
PKD1-216ENST00000483731 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.02■□□□□ 0.15
PKD1-216ENST00000483731 DISP1Q96F81 1524 aa16.01■□□□□ 0.15
PKD1-216ENST00000483731 NUP160Q12769 1436 aa16.01■□□□□ 0.15
PKD1-216ENST00000483731 NAP1L5Q96NT1 182 aaPredicted RBP16.01■□□□□ 0.15
PKD1-216ENST00000483731 BRD4O60885 1362 aaPredicted RBP16.01■□□□□ 0.15
PKD1-216ENST00000483731 TARBP1Q13395 1621 aaKnown RBP16■□□□□ 0.15
PKD1-216ENST00000483731 IL27Q8NEV9 243 aa15.99■□□□□ 0.15
PKD1-216ENST00000483731 SAMD9Q5K651 1589 aa15.99■□□□□ 0.15
PKD1-216ENST00000483731 PDE4AP27815 886 aa15.99■□□□□ 0.15
PKD1-216ENST00000483731 CD109Q6YHK3 1445 aa15.99■□□□□ 0.15
PKD1-216ENST00000483731 APAF1O14727 1248 aa15.98■□□□□ 0.15
PKD1-216ENST00000483731 CALD1Q05682 793 aaKnown RBP15.98■□□□□ 0.15
PKD1-216ENST00000483731 GSE1Q14687 1217 aa15.97■□□□□ 0.15
PKD1-216ENST00000483731 MAGI3Q5TCQ9 1506 aa15.97■□□□□ 0.15
PKD1-216ENST00000483731 HAP1P54257 671 aaPredicted RBP15.97■□□□□ 0.15
PKD1-216ENST00000483731 ADGRL1O94910 1474 aa15.97■□□□□ 0.15
PKD1-216ENST00000483731 SLC52A1Q9NWF4 448 aa15.96■□□□□ 0.15
PKD1-216ENST00000483731 ITSN2Q9NZM3 1697 aa15.96■□□□□ 0.15
PKD1-216ENST00000483731 IPO8O15397 1037 aaKnown RBP15.96■□□□□ 0.14
PKD1-216ENST00000483731 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms