RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 DDRGK1Q96HY6 314 aa14.68□□□□□ -0.06
SMPD4-218ENST00000482171 ARHGEF11O15085 1522 aa14.68□□□□□ -0.06
SMPD4-218ENST00000482171 MAP3K1Q13233 1512 aa14.68□□□□□ -0.06
SMPD4-218ENST00000482171 CCDC7Q96M83 1385 aa14.68□□□□□ -0.06
SMPD4-218ENST00000482171 U2AF1L5P0DN76 240 aaPredicted RBP14.68□□□□□ -0.06
SMPD4-218ENST00000482171 U2AF1Q01081 240 aaKnown RBP eCLIP14.68□□□□□ -0.06
SMPD4-218ENST00000482171 UPF2Q9HAU5 1272 aaKnown RBP14.68□□□□□ -0.06
SMPD4-218ENST00000482171 A0A0G2JS52 829 aa14.66□□□□□ -0.06
SMPD4-218ENST00000482171 HDGFP51858 240 aaKnown RBP14.66□□□□□ -0.06
SMPD4-218ENST00000482171 FTSJ3Q8IY81 847 aaKnown RBP14.66□□□□□ -0.06
SMPD4-218ENST00000482171 WDR97A6NE52 1622 aa14.66□□□□□ -0.06
SMPD4-218ENST00000482171 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.65□□□□□ -0.06
SMPD4-218ENST00000482171 EIF3AQ14152 1382 aaKnown RBP14.65□□□□□ -0.06
SMPD4-218ENST00000482171 SCAPERQ9BY12 1400 aa14.64□□□□□ -0.07
SMPD4-218ENST00000482171 HDGFL2Q7Z4V5 671 aaPredicted RBP14.64□□□□□ -0.07
SMPD4-218ENST00000482171 RAPGEF3O95398 923 aa14.64□□□□□ -0.07
SMPD4-218ENST00000482171 TMEM132EQ6IEE7 984 aa14.64□□□□□ -0.07
SMPD4-218ENST00000482171 RCAN3Q9UKA8 241 aa14.63□□□□□ -0.07
SMPD4-218ENST00000482171 MAGI1Q96QZ7 1491 aaPredicted RBP14.63□□□□□ -0.07
SMPD4-218ENST00000482171 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.63□□□□□ -0.07
SMPD4-218ENST00000482171 HSP90AA1P07900 732 aaKnown RBP14.62□□□□□ -0.07
SMPD4-218ENST00000482171 CFAP70Q5T0N1 1121 aa14.62□□□□□ -0.07
SMPD4-218ENST00000482171 MINK1Q8N4C8 1332 aaPredicted RBP14.62□□□□□ -0.07
SMPD4-218ENST00000482171 MYBBP1AQ9BQG0 1328 aaKnown RBP14.62□□□□□ -0.07
SMPD4-218ENST00000482171 ABCC5O15440 1437 aa14.61□□□□□ -0.07
SMPD4-218ENST00000482171 VGFO15240 615 aaPredicted RBP14.61□□□□□ -0.07
SMPD4-218ENST00000482171 KIAA1107Q9UPP5 1409 aa14.6□□□□□ -0.07
SMPD4-218ENST00000482171 RRP7AQ9Y3A4 280 aaKnown RBP14.6□□□□□ -0.07
SMPD4-218ENST00000482171 FANCIQ9NVI1 1328 aa14.59□□□□□ -0.07
SMPD4-218ENST00000482171 PTPRKQ15262 1439 aa14.59□□□□□ -0.07
SMPD4-218ENST00000482171 PTPN23Q9H3S7 1636 aa14.59□□□□□ -0.07
SMPD4-218ENST00000482171 THOC2Q8NI27 1593 aaKnown RBP14.59□□□□□ -0.07
SMPD4-218ENST00000482171 HAP1P54257 671 aaPredicted RBP14.59□□□□□ -0.07
SMPD4-218ENST00000482171 PAK3O75914 559 aaPredicted RBP14.58□□□□□ -0.07
SMPD4-218ENST00000482171 ANP32BQ92688 251 aaKnown RBP14.58□□□□□ -0.08
SMPD4-218ENST00000482171 IPO9Q96P70 1041 aaKnown RBP14.58□□□□□ -0.08
SMPD4-218ENST00000482171 MYH16Q9H6N6 1097 aa14.58□□□□□ -0.08
SMPD4-218ENST00000482171 CCDC184Q52MB2 194 aa14.56□□□□□ -0.08
SMPD4-218ENST00000482171 CAMSAP2Q08AD1 1489 aa14.56□□□□□ -0.08
SMPD4-218ENST00000482171 TERF2IPQ9NYB0 399 aa14.56□□□□□ -0.08
SMPD4-218ENST00000482171 CNTLNQ9NXG0 1405 aa14.55□□□□□ -0.08
SMPD4-218ENST00000482171 C11orf95C9JLR9 678 aaPredicted RBP14.54□□□□□ -0.08
SMPD4-218ENST00000482171 KIF21AQ7Z4S6 1674 aa14.54□□□□□ -0.08
SMPD4-218ENST00000482171 PLIN1O60240 522 aa14.54□□□□□ -0.08
SMPD4-218ENST00000482171 GOLGA2Q08379 1002 aa14.54□□□□□ -0.08
SMPD4-218ENST00000482171 CLUAP1Q96AJ1 413 aa14.53□□□□□ -0.08
SMPD4-218ENST00000482171 NCOA1Q15788 1441 aa14.52□□□□□ -0.08
SMPD4-218ENST00000482171 ROCK1Q13464 1354 aa14.52□□□□□ -0.08
SMPD4-218ENST00000482171 EID1Q9Y6B2 187 aa14.52□□□□□ -0.08
SMPD4-218ENST00000482171 ZBED9Q6R2W3 1325 aa14.52□□□□□ -0.09
SMPD4-218ENST00000482171 CENPJQ9HC77 1338 aaPredicted RBP14.52□□□□□ -0.09
SMPD4-218ENST00000482171 ANKRD30BQ9BXX2 1392 aa14.52□□□□□ -0.09
SMPD4-218ENST00000482171 BECN1Q14457 450 aa14.52□□□□□ -0.09
SMPD4-218ENST00000482171 APAF1O14727 1248 aa14.51□□□□□ -0.09
SMPD4-218ENST00000482171 NAP1L5Q96NT1 182 aaPredicted RBP14.51□□□□□ -0.09
SMPD4-218ENST00000482171 EVC2Q86UK5 1308 aa14.5□□□□□ -0.09
SMPD4-218ENST00000482171 NGDNQ8NEJ9 315 aaKnown RBP14.5□□□□□ -0.09
SMPD4-218ENST00000482171 NUP153P49790 1475 aaKnown RBP14.49□□□□□ -0.09
SMPD4-218ENST00000482171 BCL2L13Q9BXK5 485 aa14.49□□□□□ -0.09
SMPD4-218ENST00000482171 PNNQ9H307 717 aaKnown RBP14.49□□□□□ -0.09
SMPD4-218ENST00000482171 CABP2Q9NPB3 220 aa14.49□□□□□ -0.09
SMPD4-218ENST00000482171 CCDC141Q6ZP82 1450 aa14.48□□□□□ -0.09
SMPD4-218ENST00000482171 AKNAQ7Z591 1439 aa14.48□□□□□ -0.09
SMPD4-218ENST00000482171 GPATCH8Q9UKJ3 1502 aaKnown RBP14.47□□□□□ -0.09
SMPD4-218ENST00000482171 ATP10BO94823 1461 aa14.47□□□□□ -0.09
SMPD4-218ENST00000482171 PLEKHH2Q8IVE3 1493 aa14.47□□□□□ -0.09
SMPD4-218ENST00000482171 TRIM44Q96DX7 344 aaPredicted RBP14.46□□□□□ -0.09
SMPD4-218ENST00000482171 LTV1Q96GA3 475 aaPredicted RBP14.46□□□□□ -0.09
SMPD4-218ENST00000482171 CGNL1Q0VF96 1302 aa14.46□□□□□ -0.09
SMPD4-218ENST00000482171 MAPKBP1O60336 1514 aa14.46□□□□□ -0.1
SMPD4-218ENST00000482171 GGNBP2Q9H3C7 697 aa14.45□□□□□ -0.1
SMPD4-218ENST00000482171 ELL2O00472 640 aaPredicted RBP14.44□□□□□ -0.1
SMPD4-218ENST00000482171 PDE3BQ13370 1112 aa14.44□□□□□ -0.1
SMPD4-218ENST00000482171 SLC12A5Q9H2X9 1139 aa14.44□□□□□ -0.1
SMPD4-218ENST00000482171 CTTNBP2Q8WZ74 1663 aa14.44□□□□□ -0.1
SMPD4-218ENST00000482171 TCERG1O14776 1098 aaKnown RBP14.44□□□□□ -0.1
SMPD4-218ENST00000482171 EXOC6Q8TAG9 804 aa14.44□□□□□ -0.1
SMPD4-218ENST00000482171 KIF14Q15058 1648 aa14.44□□□□□ -0.1
SMPD4-218ENST00000482171 ADAMTS12P58397 1594 aa14.43□□□□□ -0.1
SMPD4-218ENST00000482171 RTF1Q92541 710 aaKnown RBP14.43□□□□□ -0.1
SMPD4-218ENST00000482171 ADAMTS8Q9UP79 889 aa14.43□□□□□ -0.1
SMPD4-218ENST00000482171 APBB1O00213 710 aa14.42□□□□□ -0.1
SMPD4-218ENST00000482171 SMC4Q9NTJ3 1288 aa14.42□□□□□ -0.1
SMPD4-218ENST00000482171 UGGT2Q9NYU1 1516 aa14.42□□□□□ -0.1
SMPD4-218ENST00000482171 CDCA7LQ96GN5 454 aa14.42□□□□□ -0.1
SMPD4-218ENST00000482171 MSH5O43196 834 aa14.41□□□□□ -0.1
SMPD4-218ENST00000482171 RAPGEF6Q8TEU7 1601 aa14.41□□□□□ -0.1
SMPD4-218ENST00000482171 ITPRIPQ8IWB1 547 aa14.41□□□□□ -0.1
SMPD4-218ENST00000482171 ANO8Q9HCE9 1232 aaPredicted RBP14.41□□□□□ -0.1
SMPD4-218ENST00000482171 STAC3Q96MF2 364 aa14.41□□□□□ -0.1
SMPD4-218ENST00000482171 CD109Q6YHK3 1445 aa14.4□□□□□ -0.1
SMPD4-218ENST00000482171 MS4A1P11836 297 aa14.4□□□□□ -0.1
SMPD4-218ENST00000482171 AMPHP49418 695 aa14.4□□□□□ -0.1
SMPD4-218ENST00000482171 EIF4G3O43432 1585 aaKnown RBP14.39□□□□□ -0.11
SMPD4-218ENST00000482171 SLC4A3P48751 1232 aa14.39□□□□□ -0.11
SMPD4-218ENST00000482171 RRP1P56182 461 aaKnown RBP14.38□□□□□ -0.11
SMPD4-218ENST00000482171 PRAM1Q96QH2 718 aa14.38□□□□□ -0.11
SMPD4-218ENST00000482171 COG3Q96JB2 828 aa14.38□□□□□ -0.11
SMPD4-218ENST00000482171 MTHFSP49914 203 aa14.37□□□□□ -0.11
SMPD4-218ENST00000482171 ADGRL1O94910 1474 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms