RNA–Protein interactions for RNA: ENST00000479485.5

SSR1-207, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 2

Gene SSR1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-207ENST00000479485 FOXK1P85037 733 aa10.62□□□□□ -0.71
SSR1-207ENST00000479485 TBC1D12O60347 775 aa10.61□□□□□ -0.71
SSR1-207ENST00000479485 P3H3Q8IVL6 736 aa10.61□□□□□ -0.71
SSR1-207ENST00000479485 KCNV2Q8TDN2 545 aa10.61□□□□□ -0.71
SSR1-207ENST00000479485 GPHNQ9NQX3 736 aaPredicted RBP10.61□□□□□ -0.71
SSR1-207ENST00000479485 KCNC4Q03721 635 aa10.6□□□□□ -0.71
SSR1-207ENST00000479485 NRG2O14511 850 aaPredicted RBP10.59□□□□□ -0.71
SSR1-207ENST00000479485 PTPREP23469 700 aa10.59□□□□□ -0.71
SSR1-207ENST00000479485 BCAMP50895 628 aa10.59□□□□□ -0.71
SSR1-207ENST00000479485 PPP1R15BQ5SWA1 713 aa10.59□□□□□ -0.71
SSR1-207ENST00000479485 BCANQ96GW7 911 aa10.59□□□□□ -0.71
SSR1-207ENST00000479485 NBPF3Q9H094 633 aa10.58□□□□□ -0.72
SSR1-207ENST00000479485 DSG2Q14126 1118 aa10.57□□□□□ -0.72
SSR1-207ENST00000479485 E2F4Q16254 413 aa10.56□□□□□ -0.72
SSR1-207ENST00000479485 ANKK1Q8NFD2 765 aa10.55□□□□□ -0.72
SSR1-207ENST00000479485 FOSBP53539 338 aa10.54□□□□□ -0.72
SSR1-207ENST00000479485 NBR1Q14596 966 aa10.54□□□□□ -0.72
SSR1-207ENST00000479485 CAMK2BQ13554 666 aa10.51□□□□□ -0.73
SSR1-207ENST00000479485 WBP1LQ9NX94 342 aa10.51□□□□□ -0.73
SSR1-207ENST00000479485 SOWAHBA6NEL2 793 aa10.5□□□□□ -0.73
SSR1-207ENST00000479485 OXER1Q8TDS5 423 aa10.5□□□□□ -0.73
SSR1-207ENST00000479485 PRKD2Q9BZL6 878 aa10.5□□□□□ -0.73
SSR1-207ENST00000479485 ADAM33Q9BZ11 813 aa10.49□□□□□ -0.73
SSR1-207ENST00000479485 ARHGEF1Q92888 912 aaKnown RBP10.48□□□□□ -0.73
SSR1-207ENST00000479485 UPF1Q92900 1129 aaKnown RBP eCLIP10.48□□□□□ -0.73
SSR1-207ENST00000479485 NYAP1Q6ZVC0 841 aa10.47□□□□□ -0.73
SSR1-207ENST00000479485 EMILIN3Q9NT22 766 aa10.46□□□□□ -0.73
SSR1-207ENST00000479485 PROX2Q3B8N5 592 aa10.45□□□□□ -0.74
SSR1-207ENST00000479485 RABGEF1Q9UJ41 708 aa10.45□□□□□ -0.74
SSR1-207ENST00000479485 DPYSL4O14531 572 aa10.42□□□□□ -0.74
SSR1-207ENST00000479485 ARIH1Q9Y4X5 557 aaPredicted RBP10.42□□□□□ -0.74
SSR1-207ENST00000479485 ZDHHC16Q969W1 377 aa10.41□□□□□ -0.74
SSR1-207ENST00000479485 ZFRQ96KR1 1074 aaKnown RBP10.41□□□□□ -0.74
SSR1-207ENST00000479485 JPH4Q96JJ6 628 aa10.4□□□□□ -0.74
SSR1-207ENST00000479485 ANO8Q9HCE9 1232 aaPredicted RBP10.38□□□□□ -0.75
SSR1-207ENST00000479485 PDZRN3Q9UPQ7 1066 aa10.38□□□□□ -0.75
SSR1-207ENST00000479485 POTECB2RU33 542 aa10.37□□□□□ -0.75
SSR1-207ENST00000479485 SEMA3EO15041 775 aa10.37□□□□□ -0.75
SSR1-207ENST00000479485 COL9A1P20849 921 aa10.37□□□□□ -0.75
SSR1-207ENST00000479485 LAPTM4BQ86VI4 370 aa10.37□□□□□ -0.75
SSR1-207ENST00000479485 V9GY48 417 aaPredicted RBP10.37□□□□□ -0.75
SSR1-207ENST00000479485 PPP1R3GB7ZBB8 358 aa10.36□□□□□ -0.75
SSR1-207ENST00000479485 PDIA6Q15084 440 aa10.36□□□□□ -0.75
SSR1-207ENST00000479485 LCE2AQ5TA79 106 aaPredicted RBP10.35□□□□□ -0.75
SSR1-207ENST00000479485 LOC100996750A0A140TA64 210 aa10.34□□□□□ -0.75
SSR1-207ENST00000479485 MAP3K9P80192 1104 aa10.34□□□□□ -0.75
SSR1-207ENST00000479485 KRTAP4-6Q9BYQ5 205 aa10.34□□□□□ -0.75
SSR1-207ENST00000479485 PPP1R18Q6NYC8 613 aa10.33□□□□□ -0.76
SSR1-207ENST00000479485 TESPA1A2RU30 521 aaPredicted RBP10.32□□□□□ -0.76
SSR1-207ENST00000479485 KIAA1468Q9P260 1216 aa10.32□□□□□ -0.76
SSR1-207ENST00000479485 HPS5Q9UPZ3 1129 aa10.32□□□□□ -0.76
SSR1-207ENST00000479485 SEPT9Q9UHD8 586 aaPredicted RBP10.31□□□□□ -0.76
SSR1-207ENST00000479485 TSR3Q9UJK0 312 aaKnown RBP10.31□□□□□ -0.76
SSR1-207ENST00000479485 SPDYE16A6NNV3 312 aaPredicted RBP10.3□□□□□ -0.76
SSR1-207ENST00000479485 TJAP1Q5JTD0 557 aa10.3□□□□□ -0.76
SSR1-207ENST00000479485 TREML4Q6UXN2 200 aa10.3□□□□□ -0.76
SSR1-207ENST00000479485 EVI5O60447 810 aa10.29□□□□□ -0.76
SSR1-207ENST00000479485 MLLT3P42568 568 aaPredicted RBP10.28□□□□□ -0.76
SSR1-207ENST00000479485 TULP1O00294 542 aaPredicted RBP10.26□□□□□ -0.77
SSR1-207ENST00000479485 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.26□□□□□ -0.77
SSR1-207ENST00000479485 LMOD2Q6P5Q4 547 aa10.25□□□□□ -0.77
SSR1-207ENST00000479485 MYT1Q01538 1121 aa10.24□□□□□ -0.77
SSR1-207ENST00000479485 TPRNQ4KMQ1 711 aa10.23□□□□□ -0.77
SSR1-207ENST00000479485 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.23□□□□□ -0.77
SSR1-207ENST00000479485 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.23□□□□□ -0.77
SSR1-207ENST00000479485 PCDHGA10Q9Y5H3 936 aa10.23□□□□□ -0.77
SSR1-207ENST00000479485 SMYD5Q6GMV2 418 aa10.22□□□□□ -0.77
SSR1-207ENST00000479485 DDX12PQ92771 950 aa10.22□□□□□ -0.77
SSR1-207ENST00000479485 LRCH3Q96II8 777 aa10.22□□□□□ -0.77
SSR1-207ENST00000479485 GRXCR2A6NFK2 248 aa10.21□□□□□ -0.77
SSR1-207ENST00000479485 TRIM67Q6ZTA4 783 aa10.21□□□□□ -0.77
SSR1-207ENST00000479485 PRKCSHP14314 528 aaPredicted RBP10.2□□□□□ -0.78
SSR1-207ENST00000479485 FAM98CQ17RN3 349 aaKnown RBP10.2□□□□□ -0.78
SSR1-207ENST00000479485 MTRQ99707 1265 aa10.19□□□□□ -0.78
SSR1-207ENST00000479485 ONECUT3O60422 494 aaPredicted RBP10.18□□□□□ -0.78
SSR1-207ENST00000479485 ZNF516Q92618 1163 aa10.18□□□□□ -0.78
SSR1-207ENST00000479485 RBM26Q5T8P6 1007 aaKnown RBP10.17□□□□□ -0.78
SSR1-207ENST00000479485 IL21Q9HBE4 155 aa10.16□□□□□ -0.78
SSR1-207ENST00000479485 PPP4CP60510 307 aa10.15□□□□□ -0.78
SSR1-207ENST00000479485 OSBPP22059 807 aa10.14□□□□□ -0.79
SSR1-207ENST00000479485 PKDCCQ504Y2 493 aa10.14□□□□□ -0.79
SSR1-207ENST00000479485 STK17AQ9UEE5 414 aa10.14□□□□□ -0.79
SSR1-207ENST00000479485 TRIM6-TRIM34B2RNG4 842 aa10.13□□□□□ -0.79
SSR1-207ENST00000479485 NKX2-3Q8TAU0 364 aa10.13□□□□□ -0.79
SSR1-207ENST00000479485 PHF14O94880 888 aa10.12□□□□□ -0.79
SSR1-207ENST00000479485 DGAT1O75907 488 aa10.11□□□□□ -0.79
SSR1-207ENST00000479485 PRIM1P49642 420 aaKnown RBP10.11□□□□□ -0.79
SSR1-207ENST00000479485 GPIHBP1Q8IV16 184 aa10.11□□□□□ -0.79
SSR1-207ENST00000479485 ZC3H15Q8WU90 426 aaKnown RBP10.1□□□□□ -0.79
SSR1-207ENST00000479485 EN1Q05925 392 aaPredicted RBP10.09□□□□□ -0.79
SSR1-207ENST00000479485 TYW1BQ6NUM6 668 aa10.09□□□□□ -0.79
SSR1-207ENST00000479485 EPAS1Q99814 870 aa10.09□□□□□ -0.79
SSR1-207ENST00000479485 FBXW7Q969H0 707 aa10.08□□□□□ -0.8
SSR1-207ENST00000479485 NUTM2FA1L443 756 aa10.07□□□□□ -0.8
SSR1-207ENST00000479485 C6orf132Q5T0Z8 1188 aa10.07□□□□□ -0.8
SSR1-207ENST00000479485 RBM33Q96EV2 1170 aaKnown RBP10.07□□□□□ -0.8
SSR1-207ENST00000479485 MAP3K7O43318 606 aa10.06□□□□□ -0.8
SSR1-207ENST00000479485 EMID1Q96A84 441 aaPredicted RBP10.06□□□□□ -0.8
SSR1-207ENST00000479485 GPR37O15354 613 aa10.05□□□□□ -0.8
SSR1-207ENST00000479485 WFS1O76024 890 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms