RNA–Protein interactions for RNA: ENST00000479113.1

RPN1-203, Transcript of ribophorin I, humanhuman

TSL 4

Gene RPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-203ENST00000479113 TOP2AP11388 1531 aaKnown RBP7.42□□□□□ -1.22
RPN1-203ENST00000479113 SUPT5HO00267 1087 aaKnown RBP7.41□□□□□ -1.22
RPN1-203ENST00000479113 KDM4FA0A1W2PPD8 638 aa7.4□□□□□ -1.22
RPN1-203ENST00000479113 OXER1Q8TDS5 423 aa7.4□□□□□ -1.22
RPN1-203ENST00000479113 PRDM2Q13029 1718 aa7.39□□□□□ -1.23
RPN1-203ENST00000479113 TBC1D12O60347 775 aa7.39□□□□□ -1.23
RPN1-203ENST00000479113 UPF1Q92900 1129 aaKnown RBP eCLIP7.39□□□□□ -1.23
RPN1-203ENST00000479113 RNF166Q96A37 237 aaPredicted RBP7.39□□□□□ -1.23
RPN1-203ENST00000479113 CCDC88BA6NC98 1476 aa7.38□□□□□ -1.23
RPN1-203ENST00000479113 PSDA5PKW4 1024 aaPredicted RBP7.38□□□□□ -1.23
RPN1-203ENST00000479113 PBX2P40425 430 aa7.38□□□□□ -1.23
RPN1-203ENST00000479113 WDR62O43379 1518 aa7.37□□□□□ -1.23
RPN1-203ENST00000479113 PTGER2P43116 358 aa7.37□□□□□ -1.23
RPN1-203ENST00000479113 MYT1LQ9UL68 1186 aa7.37□□□□□ -1.23
RPN1-203ENST00000479113 ARIH1Q9Y4X5 557 aaPredicted RBP7.37□□□□□ -1.23
RPN1-203ENST00000479113 DPYSL4O14531 572 aa7.36□□□□□ -1.23
RPN1-203ENST00000479113 ANKRD13DQ6ZTN6 518 aa7.36□□□□□ -1.23
RPN1-203ENST00000479113 LSM11P83369 360 aaKnown RBP eCLIP7.35□□□□□ -1.23
RPN1-203ENST00000479113 P3H3Q8IVL6 736 aa7.35□□□□□ -1.23
RPN1-203ENST00000479113 ARHGEF1Q92888 912 aaKnown RBP7.35□□□□□ -1.23
RPN1-203ENST00000479113 URB2Q14146 1524 aaKnown RBP7.34□□□□□ -1.23
RPN1-203ENST00000479113 POTEEQ6S8J3 1075 aa7.34□□□□□ -1.23
RPN1-203ENST00000479113 MAP3K9P80192 1104 aa7.33□□□□□ -1.24
RPN1-203ENST00000479113 ARHGAP33O14559 1287 aa7.32□□□□□ -1.24
RPN1-203ENST00000479113 AXIN2Q9Y2T1 843 aa7.32□□□□□ -1.24
RPN1-203ENST00000479113 IFT140Q96RY7 1462 aa7.3□□□□□ -1.24
RPN1-203ENST00000479113 EVI5O60447 810 aa7.3□□□□□ -1.24
RPN1-203ENST00000479113 PDIA6Q15084 440 aa7.3□□□□□ -1.24
RPN1-203ENST00000479113 ANO8Q9HCE9 1232 aaPredicted RBP7.3□□□□□ -1.24
RPN1-203ENST00000479113 ABCC8Q09428 1581 aa7.29□□□□□ -1.24
RPN1-203ENST00000479113 PPP4R3BQ5MIZ7 849 aa7.29□□□□□ -1.24
RPN1-203ENST00000479113 SPDYE16A6NNV3 312 aaPredicted RBP7.28□□□□□ -1.24
RPN1-203ENST00000479113 SEMA3EO15041 775 aa7.28□□□□□ -1.24
RPN1-203ENST00000479113 CHMP7Q8WUX9 453 aaPredicted RBP7.28□□□□□ -1.24
RPN1-203ENST00000479113 TOPBP1Q92547 1522 aa7.27□□□□□ -1.25
RPN1-203ENST00000479113 ZNF608Q9ULD9 1512 aaPredicted RBP7.27□□□□□ -1.25
RPN1-203ENST00000479113 SOGA1O94964 1423 aa7.27□□□□□ -1.25
RPN1-203ENST00000479113 AQRO60306 1485 aaKnown RBP eCLIP7.26□□□□□ -1.25
RPN1-203ENST00000479113 TDRD9Q8NDG6 1382 aaKnown RBP7.26□□□□□ -1.25
RPN1-203ENST00000479113 TK2O00142 265 aa7.26□□□□□ -1.25
RPN1-203ENST00000479113 CYB5RLQ6IPT4 315 aa7.26□□□□□ -1.25
RPN1-203ENST00000479113 MLLT3P42568 568 aaPredicted RBP7.25□□□□□ -1.25
RPN1-203ENST00000479113 ADGRD1Q6QNK2 874 aa7.25□□□□□ -1.25
RPN1-203ENST00000479113 TESPA1A2RU30 521 aaPredicted RBP7.24□□□□□ -1.25
RPN1-203ENST00000479113 PSEN2P49810 448 aa7.24□□□□□ -1.25
RPN1-203ENST00000479113 DMRTA1Q5VZB9 504 aa7.24□□□□□ -1.25
RPN1-203ENST00000479113 NBR1Q14596 966 aa7.23□□□□□ -1.25
RPN1-203ENST00000479113 ZNF454Q8N9F8 522 aa7.23□□□□□ -1.25
RPN1-203ENST00000479113 DDX12PQ92771 950 aa7.23□□□□□ -1.25
RPN1-203ENST00000479113 DNMBPQ6XZF7 1577 aa7.23□□□□□ -1.25
RPN1-203ENST00000479113 RAD54L2Q9Y4B4 1467 aa7.23□□□□□ -1.25
RPN1-203ENST00000479113 HRO43593 1189 aa7.22□□□□□ -1.25
RPN1-203ENST00000479113 FOSBP53539 338 aa7.22□□□□□ -1.25
RPN1-203ENST00000479113 KCNH8Q96L42 1107 aa7.22□□□□□ -1.25
RPN1-203ENST00000479113 BCL2L12Q9HB09 334 aa7.22□□□□□ -1.25
RPN1-203ENST00000479113 GRXCR2A6NFK2 248 aa7.21□□□□□ -1.26
RPN1-203ENST00000479113 PRIM1P49642 420 aaKnown RBP7.21□□□□□ -1.26
RPN1-203ENST00000479113 BCANQ96GW7 911 aa7.21□□□□□ -1.26
RPN1-203ENST00000479113 PCDHGA10Q9Y5H3 936 aa7.21□□□□□ -1.26
RPN1-203ENST00000479113 POLA1P09884 1462 aaPredicted RBP7.21□□□□□ -1.26
RPN1-203ENST00000479113 JPH4Q96JJ6 628 aa7.2□□□□□ -1.26
RPN1-203ENST00000479113 KCNK17Q96T54 332 aa7.2□□□□□ -1.26
RPN1-203ENST00000479113 SLC4A5Q9BY07 1137 aa7.2□□□□□ -1.26
RPN1-203ENST00000479113 FGD5Q6ZNL6 1462 aa7.19□□□□□ -1.26
RPN1-203ENST00000479113 OSBPP22059 807 aa7.19□□□□□ -1.26
RPN1-203ENST00000479113 PHF14O94880 888 aa7.18□□□□□ -1.26
RPN1-203ENST00000479113 VPS9D1Q9Y2B5 631 aa7.18□□□□□ -1.26
RPN1-203ENST00000479113 EIF4G3O43432 1585 aaKnown RBP7.17□□□□□ -1.26
RPN1-203ENST00000479113 PTPREP23469 700 aa7.17□□□□□ -1.26
RPN1-203ENST00000479113 ZDHHC16Q969W1 377 aa7.17□□□□□ -1.26
RPN1-203ENST00000479113 STAC3Q96MF2 364 aa7.17□□□□□ -1.26
RPN1-203ENST00000479113 HCSTQ9UBK5 93 aa7.17□□□□□ -1.26
RPN1-203ENST00000479113 SNAPC4Q5SXM2 1469 aa7.17□□□□□ -1.26
RPN1-203ENST00000479113 TYW1BQ6NUM6 668 aa7.16□□□□□ -1.26
RPN1-203ENST00000479113 EPAS1Q99814 870 aa7.16□□□□□ -1.26
RPN1-203ENST00000479113 ADAM33Q9BZ11 813 aa7.16□□□□□ -1.26
RPN1-203ENST00000479113 GRIN2BQ13224 1484 aa7.16□□□□□ -1.26
RPN1-203ENST00000479113 WDR97A6NE52 1622 aa7.16□□□□□ -1.26
RPN1-203ENST00000479113 RBM26Q5T8P6 1007 aaKnown RBP7.15□□□□□ -1.26
RPN1-203ENST00000479113 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.15□□□□□ -1.26
RPN1-203ENST00000479113 RBM33Q96EV2 1170 aaKnown RBP7.15□□□□□ -1.26
RPN1-203ENST00000479113 WRNQ14191 1432 aaPredicted RBP eCLIP7.15□□□□□ -1.27
RPN1-203ENST00000479113 ARHGEF11O15085 1522 aa7.15□□□□□ -1.27
RPN1-203ENST00000479113 CUX1P39880 1505 aa7.15□□□□□ -1.27
RPN1-203ENST00000479113 TARBP1Q13395 1621 aaKnown RBP7.14□□□□□ -1.27
RPN1-203ENST00000479113 GAPVD1Q14C86 1478 aa7.14□□□□□ -1.27
RPN1-203ENST00000479113 FBXW7Q969H0 707 aa7.14□□□□□ -1.27
RPN1-203ENST00000479113 ZBED2Q9BTP6 218 aa7.14□□□□□ -1.27
RPN1-203ENST00000479113 BHMG1C9JSJ3 638 aaPredicted RBP7.13□□□□□ -1.27
RPN1-203ENST00000479113 EN1Q05925 392 aaPredicted RBP7.13□□□□□ -1.27
RPN1-203ENST00000479113 SMYD5Q6GMV2 418 aa7.13□□□□□ -1.27
RPN1-203ENST00000479113 TSR1Q2NL82 804 aaKnown RBP7.12□□□□□ -1.27
RPN1-203ENST00000479113 RIMBP3CA6NJZ7 1639 aa7.12□□□□□ -1.27
RPN1-203ENST00000479113 RIMBP3BA6NNM3 1639 aa7.12□□□□□ -1.27
RPN1-203ENST00000479113 RIMBP3Q9UFD9 1639 aa7.12□□□□□ -1.27
RPN1-203ENST00000479113 SYNJ2O15056 1496 aa7.11□□□□□ -1.27
RPN1-203ENST00000479113 MAGI1Q96QZ7 1491 aaPredicted RBP7.11□□□□□ -1.27
RPN1-203ENST00000479113 C6orf132Q5T0Z8 1188 aa7.11□□□□□ -1.27
RPN1-203ENST00000479113 LMOD2Q6P5Q4 547 aa7.11□□□□□ -1.27
RPN1-203ENST00000479113 KCTD12Q96CX2 325 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms