RNA–Protein interactions for RNA: ENST00000479054.5

NISCH-207, Transcript of nischarin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NISCH, Length 5,173 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NISCH-207ENST00000479054 HECW1Q76N89 1606 aa17.45■□□□□ 0.38
NISCH-207ENST00000479054 CUL7Q14999 1698 aa17.45■□□□□ 0.38
NISCH-207ENST00000479054 NUTM2DQ5VT03 806 aaPredicted RBP17.45■□□□□ 0.38
NISCH-207ENST00000479054 TROQ12816 1431 aaPredicted RBP17.45■□□□□ 0.38
NISCH-207ENST00000479054 CDK11BP21127 795 aaKnown RBP17.45■□□□□ 0.38
NISCH-207ENST00000479054 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.45■□□□□ 0.38
NISCH-207ENST00000479054 DDRGK1Q96HY6 314 aa17.45■□□□□ 0.38
NISCH-207ENST00000479054 TSHZ2Q9NRE2 1034 aa17.44■□□□□ 0.38
NISCH-207ENST00000479054 RCAN3Q9UKA8 241 aa17.44■□□□□ 0.38
NISCH-207ENST00000479054 TMX4Q9H1E5 349 aaPredicted RBP17.44■□□□□ 0.38
NISCH-207ENST00000479054 PANK3Q9H999 370 aa17.43■□□□□ 0.38
NISCH-207ENST00000479054 MYBBP1AQ9BQG0 1328 aaKnown RBP17.43■□□□□ 0.38
NISCH-207ENST00000479054 URB2Q14146 1524 aaKnown RBP17.42■□□□□ 0.38
NISCH-207ENST00000479054 TRAK1Q9UPV9 953 aa17.42■□□□□ 0.38
NISCH-207ENST00000479054 RGS3P49796 1198 aa17.41■□□□□ 0.38
NISCH-207ENST00000479054 BECN1Q14457 450 aa17.41■□□□□ 0.38
NISCH-207ENST00000479054 EPRSP07814 1512 aaKnown RBP17.41■□□□□ 0.38
NISCH-207ENST00000479054 PCF11O94913 1555 aaKnown RBP17.41■□□□□ 0.38
NISCH-207ENST00000479054 IQGAP2Q13576 1575 aa17.4■□□□□ 0.38
NISCH-207ENST00000479054 U2AF1L5P0DN76 240 aaPredicted RBP17.4■□□□□ 0.38
NISCH-207ENST00000479054 U2AF1Q01081 240 aaKnown RBP eCLIP17.4■□□□□ 0.38
NISCH-207ENST00000479054 MAP3K1Q13233 1512 aa17.4■□□□□ 0.38
NISCH-207ENST00000479054 NCLP19338 710 aaKnown RBP17.39■□□□□ 0.37
NISCH-207ENST00000479054 CCDC7Q96M83 1385 aa17.39■□□□□ 0.37
NISCH-207ENST00000479054 SUPT6HQ7KZ85 1726 aaKnown RBP17.39■□□□□ 0.37
NISCH-207ENST00000479054 HDAC5Q9UQL6 1122 aa17.38■□□□□ 0.37
NISCH-207ENST00000479054 ARHGAP5Q13017 1502 aa17.38■□□□□ 0.37
NISCH-207ENST00000479054 KIF7Q2M1P5 1343 aa17.38■□□□□ 0.37
NISCH-207ENST00000479054 PDE3BQ13370 1112 aa17.37■□□□□ 0.37
NISCH-207ENST00000479054 AFAP1Q8N556 730 aa17.37■□□□□ 0.37
NISCH-207ENST00000479054 CDK13Q14004 1512 aaKnown RBP17.36■□□□□ 0.37
NISCH-207ENST00000479054 STAC3Q96MF2 364 aa17.36■□□□□ 0.37
NISCH-207ENST00000479054 NAP1L5Q96NT1 182 aaPredicted RBP17.35■□□□□ 0.37
NISCH-207ENST00000479054 IPO8O15397 1037 aaKnown RBP17.34■□□□□ 0.37
NISCH-207ENST00000479054 CFAP44Q96MT7 982 aa17.34■□□□□ 0.37
NISCH-207ENST00000479054 C9orf84Q5VXU9 1444 aa17.34■□□□□ 0.37
NISCH-207ENST00000479054 AMPHP49418 695 aa17.34■□□□□ 0.37
NISCH-207ENST00000479054 DAPK1P53355 1430 aa17.34■□□□□ 0.37
NISCH-207ENST00000479054 WASHC2AQ641Q2 1341 aa17.34■□□□□ 0.37
NISCH-207ENST00000479054 LMOD3Q0VAK6 560 aa17.34■□□□□ 0.37
NISCH-207ENST00000479054 NAIPQ13075 1403 aa17.33■□□□□ 0.37
NISCH-207ENST00000479054 ZBED9Q6R2W3 1325 aa17.32■□□□□ 0.36
NISCH-207ENST00000479054 GOLGA6L22H0YM25 854 aa17.31■□□□□ 0.36
NISCH-207ENST00000479054 TRIM44Q96DX7 344 aaPredicted RBP17.31■□□□□ 0.36
NISCH-207ENST00000479054 CCDC146Q8IYE0 955 aa17.31■□□□□ 0.36
NISCH-207ENST00000479054 CNTLNQ9NXG0 1405 aa17.3■□□□□ 0.36
NISCH-207ENST00000479054 KIAA1107Q9UPP5 1409 aa17.3■□□□□ 0.36
NISCH-207ENST00000479054 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.3■□□□□ 0.36
NISCH-207ENST00000479054 GRIN2AQ12879 1464 aa17.3■□□□□ 0.36
NISCH-207ENST00000479054 EVC2Q86UK5 1308 aa17.29■□□□□ 0.36
NISCH-207ENST00000479054 ZRSR1Q15695 479 aaKnown RBP17.28■□□□□ 0.36
NISCH-207ENST00000479054 STK31Q9BXU1 1019 aa17.28■□□□□ 0.36
NISCH-207ENST00000479054 NBPF8Q3BBV2 869 aa17.27■□□□□ 0.36
NISCH-207ENST00000479054 MAGI1Q96QZ7 1491 aaPredicted RBP17.27■□□□□ 0.36
NISCH-207ENST00000479054 ROCK1Q13464 1354 aa17.27■□□□□ 0.36
NISCH-207ENST00000479054 PLEKHH2Q8IVE3 1493 aa17.27■□□□□ 0.35
NISCH-207ENST00000479054 KCNJ4P48050 445 aa17.26■□□□□ 0.35
NISCH-207ENST00000479054 FGD1P98174 961 aa17.26■□□□□ 0.35
NISCH-207ENST00000479054 ZNF608Q9ULD9 1512 aaPredicted RBP17.26■□□□□ 0.35
NISCH-207ENST00000479054 PLB1Q6P1J6 1458 aa17.25■□□□□ 0.35
NISCH-207ENST00000479054 EVA1CP58658 441 aa17.25■□□□□ 0.35
NISCH-207ENST00000479054 MEX3CQ5U5Q3 659 aaKnown RBP17.23■□□□□ 0.35
NISCH-207ENST00000479054 COG3Q96JB2 828 aa17.23■□□□□ 0.35
NISCH-207ENST00000479054 CGNL1Q0VF96 1302 aa17.23■□□□□ 0.35
NISCH-207ENST00000479054 POGZQ7Z3K3 1410 aa17.23■□□□□ 0.35
NISCH-207ENST00000479054 ATF3P18847 181 aa17.23■□□□□ 0.35
NISCH-207ENST00000479054 ZNF330Q9Y3S2 320 aaPredicted RBP17.23■□□□□ 0.35
NISCH-207ENST00000479054 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.22■□□□□ 0.35
NISCH-207ENST00000479054 WDR97A6NE52 1622 aa17.22■□□□□ 0.35
NISCH-207ENST00000479054 PTPN23Q9H3S7 1636 aa17.21■□□□□ 0.35
NISCH-207ENST00000479054 CENPJQ9HC77 1338 aaPredicted RBP17.2■□□□□ 0.34
NISCH-207ENST00000479054 TCERG1O14776 1098 aaKnown RBP17.2■□□□□ 0.34
NISCH-207ENST00000479054 MCCP23508 829 aa17.19■□□□□ 0.34
NISCH-207ENST00000479054 MINK1Q8N4C8 1332 aaPredicted RBP17.19■□□□□ 0.34
NISCH-207ENST00000479054 NBPF1Q3BBV0 1214 aa17.19■□□□□ 0.34
NISCH-207ENST00000479054 ABCC5O15440 1437 aa17.19■□□□□ 0.34
NISCH-207ENST00000479054 ARHGEF11O15085 1522 aa17.19■□□□□ 0.34
NISCH-207ENST00000479054 SCAPERQ9BY12 1400 aa17.17■□□□□ 0.34
NISCH-207ENST00000479054 NUTM2FA1L443 756 aa17.17■□□□□ 0.34
NISCH-207ENST00000479054 C1orf141Q5JVX7 400 aa17.17■□□□□ 0.34
NISCH-207ENST00000479054 PSME1Q06323 249 aa17.17■□□□□ 0.34
NISCH-207ENST00000479054 RRP7AQ9Y3A4 280 aaKnown RBP17.16■□□□□ 0.34
NISCH-207ENST00000479054 CAMSAP2Q08AD1 1489 aa17.16■□□□□ 0.34
NISCH-207ENST00000479054 TAF7LQ5H9L4 462 aa17.16■□□□□ 0.34
NISCH-207ENST00000479054 RWDD1Q9H446 243 aaPredicted RBP17.16■□□□□ 0.34
NISCH-207ENST00000479054 CFAP70Q5T0N1 1121 aa17.16■□□□□ 0.34
NISCH-207ENST00000479054 SMC4Q9NTJ3 1288 aa17.16■□□□□ 0.34
NISCH-207ENST00000479054 ITPRIPQ8IWB1 547 aa17.15■□□□□ 0.34
NISCH-207ENST00000479054 G3V3G9 751 aa17.15■□□□□ 0.34
NISCH-207ENST00000479054 DCAF8Q5TAQ9 597 aa17.15■□□□□ 0.34
NISCH-207ENST00000479054 LTV1Q96GA3 475 aaPredicted RBP17.15■□□□□ 0.34
NISCH-207ENST00000479054 GTF2E1P29083 439 aaPredicted RBP17.15■□□□□ 0.34
NISCH-207ENST00000479054 APAF1O14727 1248 aa17.14■□□□□ 0.33
NISCH-207ENST00000479054 RRP1P56182 461 aaKnown RBP17.13■□□□□ 0.33
NISCH-207ENST00000479054 THEMISQ8N1K5 641 aaPredicted RBP17.13■□□□□ 0.33
NISCH-207ENST00000479054 E9PSI1 815 aa17.13■□□□□ 0.33
NISCH-207ENST00000479054 CLUAP1Q96AJ1 413 aa17.13■□□□□ 0.33
NISCH-207ENST00000479054 ANKRD30BQ9BXX2 1392 aa17.13■□□□□ 0.33
NISCH-207ENST00000479054 TMEM132EQ6IEE7 984 aa17.12■□□□□ 0.33
NISCH-207ENST00000479054 CCDC141Q6ZP82 1450 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms