RNA–Protein interactions for RNA: ENST00000478440.1

ITGA4-209, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best)

Gene ITGA4, Length 1,144 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-209ENST00000478440 GRXCR2A6NFK2 248 aa13.08□□□□□ -0.32
ITGA4-209ENST00000478440 ANKRD13DQ6ZTN6 518 aa13.08□□□□□ -0.32
ITGA4-209ENST00000478440 TK2O00142 265 aa13.07□□□□□ -0.32
ITGA4-209ENST00000478440 POTEEQ6S8J3 1075 aa13.07□□□□□ -0.32
ITGA4-209ENST00000478440 PSEN2P49810 448 aa13.05□□□□□ -0.32
ITGA4-209ENST00000478440 EN1Q05925 392 aaPredicted RBP13.05□□□□□ -0.32
ITGA4-209ENST00000478440 SLC4A5Q9BY07 1137 aa13.04□□□□□ -0.32
ITGA4-209ENST00000478440 PPP1R3GB7ZBB8 358 aa13.03□□□□□ -0.32
ITGA4-209ENST00000478440 MAP3K7O43318 606 aa13.03□□□□□ -0.32
ITGA4-209ENST00000478440 C6orf132Q5T0Z8 1188 aa13.02□□□□□ -0.33
ITGA4-209ENST00000478440 SMYD5Q6GMV2 418 aa13.02□□□□□ -0.33
ITGA4-209ENST00000478440 RBM33Q96EV2 1170 aaKnown RBP13.02□□□□□ -0.33
ITGA4-209ENST00000478440 DMRTA1Q5VZB9 504 aa13□□□□□ -0.33
ITGA4-209ENST00000478440 ADGRD1Q6QNK2 874 aa13□□□□□ -0.33
ITGA4-209ENST00000478440 CERKQ8TCT0 537 aa12.99□□□□□ -0.33
ITGA4-209ENST00000478440 STAC3Q96MF2 364 aa12.99□□□□□ -0.33
ITGA4-209ENST00000478440 OSBPP22059 807 aa12.98□□□□□ -0.33
ITGA4-209ENST00000478440 ZBED2Q9BTP6 218 aa12.97□□□□□ -0.33
ITGA4-209ENST00000478440 SEMA3EO15041 775 aa12.96□□□□□ -0.33
ITGA4-209ENST00000478440 VPS9D1Q9Y2B5 631 aa12.95□□□□□ -0.34
ITGA4-209ENST00000478440 TULP1O00294 542 aaPredicted RBP12.94□□□□□ -0.34
ITGA4-209ENST00000478440 ONECUT3O60422 494 aaPredicted RBP12.94□□□□□ -0.34
ITGA4-209ENST00000478440 MLLT3P42568 568 aaPredicted RBP12.94□□□□□ -0.34
ITGA4-209ENST00000478440 TESPA1A2RU30 521 aaPredicted RBP12.93□□□□□ -0.34
ITGA4-209ENST00000478440 COL9A1P20849 921 aa12.92□□□□□ -0.34
ITGA4-209ENST00000478440 TSR1Q2NL82 804 aaKnown RBP12.91□□□□□ -0.34
ITGA4-209ENST00000478440 NBPF3Q9H094 633 aa12.91□□□□□ -0.34
ITGA4-209ENST00000478440 HCSTQ9UBK5 93 aa12.91□□□□□ -0.34
ITGA4-209ENST00000478440 HRO43593 1189 aa12.9□□□□□ -0.34
ITGA4-209ENST00000478440 SLC24A1O60721 1099 aa12.9□□□□□ -0.34
ITGA4-209ENST00000478440 RABGEF1Q9UJ41 708 aa12.89□□□□□ -0.35
ITGA4-209ENST00000478440 TRIM6-TRIM34B2RNG4 842 aa12.86□□□□□ -0.35
ITGA4-209ENST00000478440 PRIM1P49642 420 aaKnown RBP12.86□□□□□ -0.35
ITGA4-209ENST00000478440 RBM27Q9P2N5 1060 aaKnown RBP12.86□□□□□ -0.35
ITGA4-209ENST00000478440 PACS2Q86VP3 889 aa12.85□□□□□ -0.35
ITGA4-209ENST00000478440 PRSS12P56730 875 aa12.84□□□□□ -0.35
ITGA4-209ENST00000478440 PROX2Q3B8N5 592 aa12.84□□□□□ -0.35
ITGA4-209ENST00000478440 MRPL50Q8N5N7 158 aaKnown RBP12.84□□□□□ -0.35
ITGA4-209ENST00000478440 NUTM2FA1L443 756 aa12.83□□□□□ -0.36
ITGA4-209ENST00000478440 GOLGA8CPA6NN73 597 aa12.83□□□□□ -0.36
ITGA4-209ENST00000478440 BHMG1C9JSJ3 638 aaPredicted RBP12.83□□□□□ -0.36
ITGA4-209ENST00000478440 LAPTM4BQ86VI4 370 aa12.82□□□□□ -0.36
ITGA4-209ENST00000478440 CDCA7LQ96GN5 454 aa12.82□□□□□ -0.36
ITGA4-209ENST00000478440 CDHR5Q9HBB8 845 aa12.81□□□□□ -0.36
ITGA4-209ENST00000478440 KIAA1468Q9P260 1216 aa12.81□□□□□ -0.36
ITGA4-209ENST00000478440 FCHSD2O94868 740 aa12.79□□□□□ -0.36
ITGA4-209ENST00000478440 NBPF26B4DH59 902 aa12.77□□□□□ -0.37
ITGA4-209ENST00000478440 PTGDRQ13258 359 aa12.77□□□□□ -0.37
ITGA4-209ENST00000478440 NPDC1Q9NQX5 325 aaPredicted RBP12.77□□□□□ -0.37
ITGA4-209ENST00000478440 TSKSQ9UJT2 592 aa12.76□□□□□ -0.37
ITGA4-209ENST00000478440 IRX2Q9BZI1 471 aaPredicted RBP12.75□□□□□ -0.37
ITGA4-209ENST00000478440 FAM98CQ17RN3 349 aaKnown RBP12.74□□□□□ -0.37
ITGA4-209ENST00000478440 HIC1Q14526 733 aa12.73□□□□□ -0.37
ITGA4-209ENST00000478440 RBM26Q5T8P6 1007 aaKnown RBP12.73□□□□□ -0.37
ITGA4-209ENST00000478440 NISCHQ9Y2I1 1504 aa12.72□□□□□ -0.37
ITGA4-209ENST00000478440 PADI6Q6TGC4 694 aa12.71□□□□□ -0.37
ITGA4-209ENST00000478440 GPIHBP1Q8IV16 184 aa12.71□□□□□ -0.37
ITGA4-209ENST00000478440 TTC13Q8NBP0 860 aa12.71□□□□□ -0.37
ITGA4-209ENST00000478440 ANKK1Q8NFD2 765 aa12.71□□□□□ -0.37
ITGA4-209ENST00000478440 WNT2BQ93097 391 aa12.71□□□□□ -0.37
ITGA4-209ENST00000478440 KCTD12Q96CX2 325 aaKnown RBP12.71□□□□□ -0.37
ITGA4-209ENST00000478440 RGS20O76081 388 aa12.7□□□□□ -0.38
ITGA4-209ENST00000478440 TATDN2Q93075 761 aa12.7□□□□□ -0.38
ITGA4-209ENST00000478440 SEPT9Q9UHD8 586 aaPredicted RBP12.69□□□□□ -0.38
ITGA4-209ENST00000478440 PNMA3Q9UL41 463 aa12.69□□□□□ -0.38
ITGA4-209ENST00000478440 ZFRQ96KR1 1074 aaKnown RBP12.68□□□□□ -0.38
ITGA4-209ENST00000478440 HDGFP51858 240 aaKnown RBP12.67□□□□□ -0.38
ITGA4-209ENST00000478440 NUDT18Q6ZVK8 323 aa12.66□□□□□ -0.38
ITGA4-209ENST00000478440 FAM198AQ9UFP1 575 aa12.66□□□□□ -0.38
ITGA4-209ENST00000478440 GNPATO15228 680 aa12.65□□□□□ -0.38
ITGA4-209ENST00000478440 THSD4Q6ZMP0 1018 aa12.65□□□□□ -0.38
ITGA4-209ENST00000478440 RBM46Q8TBY0 533 aaKnown RBP12.64□□□□□ -0.39
ITGA4-209ENST00000478440 LRCH3Q96II8 777 aa12.63□□□□□ -0.39
ITGA4-209ENST00000478440 SLC4A3P48751 1232 aa12.62□□□□□ -0.39
ITGA4-209ENST00000478440 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.62□□□□□ -0.39
ITGA4-209ENST00000478440 SOWAHBA6NEL2 793 aa12.61□□□□□ -0.39
ITGA4-209ENST00000478440 OATP04181 439 aa12.61□□□□□ -0.39
ITGA4-209ENST00000478440 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.61□□□□□ -0.39
ITGA4-209ENST00000478440 SMAPO00193 183 aa12.6□□□□□ -0.39
ITGA4-209ENST00000478440 NECTIN2Q92692 538 aa12.6□□□□□ -0.39
ITGA4-209ENST00000478440 GPR37O15354 613 aa12.59□□□□□ -0.39
ITGA4-209ENST00000478440 LMOD2Q6P5Q4 547 aa12.59□□□□□ -0.39
ITGA4-209ENST00000478440 NYAP1Q6ZVC0 841 aa12.59□□□□□ -0.39
ITGA4-209ENST00000478440 ADGRG1Q9Y653 693 aa12.59□□□□□ -0.39
ITGA4-209ENST00000478440 PTPN5P54829 565 aa12.58□□□□□ -0.4
ITGA4-209ENST00000478440 BCANQ96GW7 911 aa12.58□□□□□ -0.4
ITGA4-209ENST00000478440 EYA1Q99502 592 aa12.58□□□□□ -0.4
ITGA4-209ENST00000478440 DNAJB2P25686 324 aa12.56□□□□□ -0.4
ITGA4-209ENST00000478440 SAMD7Q7Z3H4 446 aa12.55□□□□□ -0.4
ITGA4-209ENST00000478440 C3orf80F5H4A9 247 aa12.54□□□□□ -0.4
ITGA4-209ENST00000478440 BCAMP50895 628 aa12.54□□□□□ -0.4
ITGA4-209ENST00000478440 TSR3Q9UJK0 312 aaKnown RBP12.54□□□□□ -0.4
ITGA4-209ENST00000478440 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.53□□□□□ -0.4
ITGA4-209ENST00000478440 SLF2Q8IX21 1173 aa12.53□□□□□ -0.4
ITGA4-209ENST00000478440 PPP4CP60510 307 aa12.51□□□□□ -0.41
ITGA4-209ENST00000478440 MAP2K5Q13163 448 aa12.51□□□□□ -0.41
ITGA4-209ENST00000478440 HPS5Q9UPZ3 1129 aa12.51□□□□□ -0.41
ITGA4-209ENST00000478440 PXYLP1Q8TE99 480 aa12.5□□□□□ -0.41
ITGA4-209ENST00000478440 MINK1Q8N4C8 1332 aaPredicted RBP12.49□□□□□ -0.41
ITGA4-209ENST00000478440 RCCD1A6NED2 376 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms