RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 EFCAB5A4FU69 1503 aa18.11■□□□□ 0.49
NPHP4-208ENST00000478423 SMC4Q9NTJ3 1288 aa18.11■□□□□ 0.49
NPHP4-208ENST00000478423 EVC2Q86UK5 1308 aa18.11■□□□□ 0.49
NPHP4-208ENST00000478423 SYNJ2O15056 1496 aa18.1■□□□□ 0.49
NPHP4-208ENST00000478423 APBB1O00213 710 aa18.1■□□□□ 0.49
NPHP4-208ENST00000478423 CCDC7Q96M83 1385 aa18.09■□□□□ 0.49
NPHP4-208ENST00000478423 DNMBPQ6XZF7 1577 aa18.09■□□□□ 0.49
NPHP4-208ENST00000478423 CGNL1Q0VF96 1302 aa18.08■□□□□ 0.48
NPHP4-208ENST00000478423 CSB-PGBD3P0DP91 1061 aa18.08■□□□□ 0.48
NPHP4-208ENST00000478423 CENPJQ9HC77 1338 aaPredicted RBP18.07■□□□□ 0.48
NPHP4-208ENST00000478423 RWDD1Q9H446 243 aaPredicted RBP18.07■□□□□ 0.48
NPHP4-208ENST00000478423 AMPHP49418 695 aa18.06■□□□□ 0.48
NPHP4-208ENST00000478423 SNAPC4Q5SXM2 1469 aa18.06■□□□□ 0.48
NPHP4-208ENST00000478423 ZBED9Q6R2W3 1325 aa18.06■□□□□ 0.48
NPHP4-208ENST00000478423 STAC3Q96MF2 364 aa18.06■□□□□ 0.48
NPHP4-208ENST00000478423 HSP90AB1P08238 724 aaKnown RBP18.05■□□□□ 0.48
NPHP4-208ENST00000478423 TCERG1O14776 1098 aaKnown RBP18.05■□□□□ 0.48
NPHP4-208ENST00000478423 KCNJ4P48050 445 aa18.05■□□□□ 0.48
NPHP4-208ENST00000478423 TROQ12816 1431 aaPredicted RBP18.05■□□□□ 0.48
NPHP4-208ENST00000478423 WASHC2AQ641Q2 1341 aa18.05■□□□□ 0.48
NPHP4-208ENST00000478423 LTV1Q96GA3 475 aaPredicted RBP18.04■□□□□ 0.48
NPHP4-208ENST00000478423 APAF1O14727 1248 aa18.04■□□□□ 0.48
NPHP4-208ENST00000478423 TPRNQ4KMQ1 711 aa18.04■□□□□ 0.48
NPHP4-208ENST00000478423 MIA2Q96PC5 1412 aa18.03■□□□□ 0.48
NPHP4-208ENST00000478423 ARHGAP5Q13017 1502 aa18.03■□□□□ 0.48
NPHP4-208ENST00000478423 ABCA10Q8WWZ4 1543 aa18.03■□□□□ 0.48
NPHP4-208ENST00000478423 STK31Q9BXU1 1019 aa18.02■□□□□ 0.48
NPHP4-208ENST00000478423 TIAM1Q13009 1591 aa18.02■□□□□ 0.48
NPHP4-208ENST00000478423 TSHZ2Q9NRE2 1034 aa18.02■□□□□ 0.47
NPHP4-208ENST00000478423 NPHP1O15259 732 aa18.01■□□□□ 0.47
NPHP4-208ENST00000478423 BCL2L13Q9BXK5 485 aa18.01■□□□□ 0.47
NPHP4-208ENST00000478423 PLIN1O60240 522 aa18■□□□□ 0.47
NPHP4-208ENST00000478423 TMEM132EQ6IEE7 984 aa18■□□□□ 0.47
NPHP4-208ENST00000478423 HFM1A2PYH4 1435 aa18■□□□□ 0.47
NPHP4-208ENST00000478423 FGD1P98174 961 aa18■□□□□ 0.47
NPHP4-208ENST00000478423 LMOD3Q0VAK6 560 aa18■□□□□ 0.47
NPHP4-208ENST00000478423 COG3Q96JB2 828 aa18■□□□□ 0.47
NPHP4-208ENST00000478423 EHBP1L1Q8N3D4 1523 aa17.99■□□□□ 0.47
NPHP4-208ENST00000478423 HSCBQ8IWL3 235 aa17.99■□□□□ 0.47
NPHP4-208ENST00000478423 ELL2O00472 640 aaPredicted RBP17.99■□□□□ 0.47
NPHP4-208ENST00000478423 CFAP70Q5T0N1 1121 aa17.99■□□□□ 0.47
NPHP4-208ENST00000478423 PMFBP1Q8TBY8 1022 aa17.99■□□□□ 0.47
NPHP4-208ENST00000478423 TRIM44Q96DX7 344 aaPredicted RBP17.99■□□□□ 0.47
NPHP4-208ENST00000478423 NBPF8Q3BBV2 869 aa17.98■□□□□ 0.47
NPHP4-208ENST00000478423 C9orf84Q5VXU9 1444 aa17.98■□□□□ 0.47
NPHP4-208ENST00000478423 KIAA0586Q9BVV6 1533 aa17.98■□□□□ 0.47
NPHP4-208ENST00000478423 NBPF1Q3BBV0 1214 aa17.98■□□□□ 0.47
NPHP4-208ENST00000478423 SPRYD3Q8NCJ5 442 aa17.97■□□□□ 0.47
NPHP4-208ENST00000478423 SLC4A10Q6U841 1118 aa17.96■□□□□ 0.47
NPHP4-208ENST00000478423 E9PSI1 815 aa17.96■□□□□ 0.47
NPHP4-208ENST00000478423 CHMP4AQ9BY43 222 aa17.96■□□□□ 0.46
NPHP4-208ENST00000478423 ZNF330Q9Y3S2 320 aaPredicted RBP17.96■□□□□ 0.46
NPHP4-208ENST00000478423 CNTLNQ9NXG0 1405 aa17.95■□□□□ 0.46
NPHP4-208ENST00000478423 EXOC6Q8TAG9 804 aa17.94■□□□□ 0.46
NPHP4-208ENST00000478423 RRP1P56182 461 aaKnown RBP17.94■□□□□ 0.46
NPHP4-208ENST00000478423 TAOK2Q9UL54 1235 aa17.94■□□□□ 0.46
NPHP4-208ENST00000478423 SCAPERQ9BY12 1400 aa17.93■□□□□ 0.46
NPHP4-208ENST00000478423 EPRSP07814 1512 aaKnown RBP17.93■□□□□ 0.46
NPHP4-208ENST00000478423 KIAA1107Q9UPP5 1409 aa17.92■□□□□ 0.46
NPHP4-208ENST00000478423 CDK13Q14004 1512 aaKnown RBP17.92■□□□□ 0.46
NPHP4-208ENST00000478423 LAMC3Q9Y6N6 1575 aa17.92■□□□□ 0.46
NPHP4-208ENST00000478423 PEG3Q9GZU2 1588 aa17.92■□□□□ 0.46
NPHP4-208ENST00000478423 CFAP44Q96MT7 982 aa17.92■□□□□ 0.46
NPHP4-208ENST00000478423 NAP1L2Q9ULW6 460 aaPredicted RBP17.91■□□□□ 0.46
NPHP4-208ENST00000478423 MCCP23508 829 aa17.91■□□□□ 0.46
NPHP4-208ENST00000478423 DIAPH1O60610 1272 aaKnown RBP17.91■□□□□ 0.46
NPHP4-208ENST00000478423 ZRSR1Q15695 479 aaKnown RBP17.9■□□□□ 0.46
NPHP4-208ENST00000478423 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.9■□□□□ 0.46
NPHP4-208ENST00000478423 NAIPQ13075 1403 aa17.9■□□□□ 0.46
NPHP4-208ENST00000478423 DAPK1P53355 1430 aa17.9■□□□□ 0.46
NPHP4-208ENST00000478423 HECW1Q76N89 1606 aa17.9■□□□□ 0.46
NPHP4-208ENST00000478423 GGNBP2Q9H3C7 697 aa17.89■□□□□ 0.45
NPHP4-208ENST00000478423 CABP2Q9NPB3 220 aa17.89■□□□□ 0.45
NPHP4-208ENST00000478423 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.89■□□□□ 0.45
NPHP4-208ENST00000478423 HMMRO75330 724 aa17.89■□□□□ 0.45
NPHP4-208ENST00000478423 COG6Q9Y2V7 657 aa17.89■□□□□ 0.45
NPHP4-208ENST00000478423 CRBNQ96SW2 442 aa17.88■□□□□ 0.45
NPHP4-208ENST00000478423 SLKQ9H2G2 1235 aaPredicted RBP17.88■□□□□ 0.45
NPHP4-208ENST00000478423 RAPGEF3O95398 923 aa17.87■□□□□ 0.45
NPHP4-208ENST00000478423 PTMAP06454 111 aaKnown RBP17.87■□□□□ 0.45
NPHP4-208ENST00000478423 MFAP1P55081 439 aaKnown RBP17.87■□□□□ 0.45
NPHP4-208ENST00000478423 NGEFQ8N5V2 710 aa17.87■□□□□ 0.45
NPHP4-208ENST00000478423 ZKSCAN2Q63HK3 967 aa17.86■□□□□ 0.45
NPHP4-208ENST00000478423 KIAA1211Q6ZU35 1233 aa17.86■□□□□ 0.45
NPHP4-208ENST00000478423 IQGAP2Q13576 1575 aa17.85■□□□□ 0.45
NPHP4-208ENST00000478423 PLEKHH2Q8IVE3 1493 aa17.85■□□□□ 0.45
NPHP4-208ENST00000478423 RIPK4P57078 832 aa17.85■□□□□ 0.45
NPHP4-208ENST00000478423 ADAMTS8Q9UP79 889 aa17.84■□□□□ 0.45
NPHP4-208ENST00000478423 CENPQQ7L2Z9 268 aaPredicted RBP17.84■□□□□ 0.45
NPHP4-208ENST00000478423 PLB1Q6P1J6 1458 aa17.83■□□□□ 0.45
NPHP4-208ENST00000478423 RUNDC1Q96C34 613 aa17.83■□□□□ 0.44
NPHP4-208ENST00000478423 URB2Q14146 1524 aaKnown RBP17.83■□□□□ 0.44
NPHP4-208ENST00000478423 PCF11O94913 1555 aaKnown RBP17.82■□□□□ 0.44
NPHP4-208ENST00000478423 MTHFSP49914 203 aa17.82■□□□□ 0.44
NPHP4-208ENST00000478423 PLCB2Q00722 1185 aa17.82■□□□□ 0.44
NPHP4-208ENST00000478423 SUPT6HQ7KZ85 1726 aaKnown RBP17.82■□□□□ 0.44
NPHP4-208ENST00000478423 HDAC5Q9UQL6 1122 aa17.82■□□□□ 0.44
NPHP4-208ENST00000478423 BRD4O60885 1362 aaPredicted RBP17.81■□□□□ 0.44
NPHP4-208ENST00000478423 IPO9Q96P70 1041 aaKnown RBP17.81■□□□□ 0.44
NPHP4-208ENST00000478423 CCDC9Q9Y3X0 531 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms