RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 DGAT1O75907 488 aa8.84□□□□□ -0.99
CALD1-218ENST00000478075 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.84□□□□□ -0.99
CALD1-218ENST00000478075 DSG2Q14126 1118 aa8.83□□□□□ -1
CALD1-218ENST00000478075 LRCH3Q96II8 777 aa8.83□□□□□ -1
CALD1-218ENST00000478075 GGCXP38435 758 aa8.82□□□□□ -1
CALD1-218ENST00000478075 PPP1R18Q6NYC8 613 aa8.82□□□□□ -1
CALD1-218ENST00000478075 ADAM33Q9BZ11 813 aa8.82□□□□□ -1
CALD1-218ENST00000478075 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.82□□□□□ -1
CALD1-218ENST00000478075 HPS5Q9UPZ3 1129 aa8.81□□□□□ -1
CALD1-218ENST00000478075 ANO8Q9HCE9 1232 aaPredicted RBP8.8□□□□□ -1
CALD1-218ENST00000478075 IL21Q9HBE4 155 aa8.79□□□□□ -1
CALD1-218ENST00000478075 WFS1O76024 890 aa8.78□□□□□ -1
CALD1-218ENST00000478075 MYT1Q01538 1121 aa8.78□□□□□ -1
CALD1-218ENST00000478075 FAM98CQ17RN3 349 aaKnown RBP8.78□□□□□ -1
CALD1-218ENST00000478075 UPF1Q92900 1129 aaKnown RBP eCLIP8.78□□□□□ -1
CALD1-218ENST00000478075 FAM181BA6NEQ2 426 aa8.77□□□□□ -1.01
CALD1-218ENST00000478075 WIPF1O43516 503 aa8.77□□□□□ -1.01
CALD1-218ENST00000478075 PROX2Q3B8N5 592 aa8.76□□□□□ -1.01
CALD1-218ENST00000478075 TJAP1Q5JTD0 557 aa8.76□□□□□ -1.01
CALD1-218ENST00000478075 KIAA1468Q9P260 1216 aa8.76□□□□□ -1.01
CALD1-218ENST00000478075 PPP4CP60510 307 aa8.74□□□□□ -1.01
CALD1-218ENST00000478075 FBXW7Q969H0 707 aa8.74□□□□□ -1.01
CALD1-218ENST00000478075 TMUB1Q9BVT8 246 aa8.73□□□□□ -1.01
CALD1-218ENST00000478075 POTECB2RU33 542 aa8.71□□□□□ -1.02
CALD1-218ENST00000478075 PPP1R37O75864 691 aa8.71□□□□□ -1.02
CALD1-218ENST00000478075 EVI5O60447 810 aa8.7□□□□□ -1.02
CALD1-218ENST00000478075 PRR20EP86478 221 aa8.69□□□□□ -1.02
CALD1-218ENST00000478075 PRR20CP86479 221 aa8.69□□□□□ -1.02
CALD1-218ENST00000478075 PRR20DP86480 221 aa8.69□□□□□ -1.02
CALD1-218ENST00000478075 PRR20BP86481 221 aa8.69□□□□□ -1.02
CALD1-218ENST00000478075 PRR20AP86496 221 aa8.69□□□□□ -1.02
CALD1-218ENST00000478075 MTRQ99707 1265 aa8.69□□□□□ -1.02
CALD1-218ENST00000478075 SEPT9Q9UHD8 586 aaPredicted RBP8.68□□□□□ -1.02
CALD1-218ENST00000478075 COL9A1P20849 921 aa8.66□□□□□ -1.02
CALD1-218ENST00000478075 TYW1BQ6NUM6 668 aa8.65□□□□□ -1.02
CALD1-218ENST00000478075 TRIM6-TRIM34B2RNG4 842 aa8.64□□□□□ -1.03
CALD1-218ENST00000478075 FAM187AA6NFU0 413 aa8.62□□□□□ -1.03
CALD1-218ENST00000478075 PPP1R15BQ5SWA1 713 aa8.62□□□□□ -1.03
CALD1-218ENST00000478075 TRIM67Q6ZTA4 783 aa8.62□□□□□ -1.03
CALD1-218ENST00000478075 SLC19A1P41440 591 aa8.61□□□□□ -1.03
CALD1-218ENST00000478075 SUZ12Q15022 739 aaKnown RBP8.61□□□□□ -1.03
CALD1-218ENST00000478075 NECTIN2Q92692 538 aa8.61□□□□□ -1.03
CALD1-218ENST00000478075 PCDHGA10Q9Y5H3 936 aa8.6□□□□□ -1.03
CALD1-218ENST00000478075 PHF14O94880 888 aa8.59□□□□□ -1.03
CALD1-218ENST00000478075 NFX1Q12986 1120 aaKnown RBP8.59□□□□□ -1.03
CALD1-218ENST00000478075 ZNF598Q86UK7 904 aaKnown RBP8.59□□□□□ -1.03
CALD1-218ENST00000478075 PACS2Q86VP3 889 aa8.58□□□□□ -1.04
CALD1-218ENST00000478075 AAASQ9NRG9 546 aa8.58□□□□□ -1.04
CALD1-218ENST00000478075 MAP3K9P80192 1104 aa8.57□□□□□ -1.04
CALD1-218ENST00000478075 C11orf95C9JLR9 678 aaPredicted RBP8.55□□□□□ -1.04
CALD1-218ENST00000478075 SPRYD7Q5W111 196 aa8.55□□□□□ -1.04
CALD1-218ENST00000478075 CRIPAKQ8N1N5 446 aa8.55□□□□□ -1.04
CALD1-218ENST00000478075 ZNF516Q92618 1163 aa8.55□□□□□ -1.04
CALD1-218ENST00000478075 EPAS1Q99814 870 aa8.54□□□□□ -1.04
CALD1-218ENST00000478075 CRISPLD2Q9H0B8 497 aa8.54□□□□□ -1.04
CALD1-218ENST00000478075 C6orf132Q5T0Z8 1188 aa8.52□□□□□ -1.05
CALD1-218ENST00000478075 ST8SIA5O15466 376 aa8.51□□□□□ -1.05
CALD1-218ENST00000478075 HDGFP51858 240 aaKnown RBP8.51□□□□□ -1.05
CALD1-218ENST00000478075 PDE4AP27815 886 aa8.5□□□□□ -1.05
CALD1-218ENST00000478075 LMOD2Q6P5Q4 547 aa8.5□□□□□ -1.05
CALD1-218ENST00000478075 ZNF697Q5TEC3 545 aa8.49□□□□□ -1.05
CALD1-218ENST00000478075 SAMD7Q7Z3H4 446 aa8.49□□□□□ -1.05
CALD1-218ENST00000478075 NKX2-3Q8TAU0 364 aa8.48□□□□□ -1.05
CALD1-218ENST00000478075 CTC1Q2NKJ3 1217 aa8.47□□□□□ -1.05
CALD1-218ENST00000478075 RYDENQ9NUL5 291 aaKnown RBP8.47□□□□□ -1.05
CALD1-218ENST00000478075 ANKLE1Q8NAG6 615 aa8.46□□□□□ -1.06
CALD1-218ENST00000478075 GDF9O60383 454 aa8.45□□□□□ -1.06
CALD1-218ENST00000478075 RNF223E7ERA6 249 aa8.44□□□□□ -1.06
CALD1-218ENST00000478075 TERTO14746 1132 aaKnown RBP8.44□□□□□ -1.06
CALD1-218ENST00000478075 AXIN1O15169 862 aa8.44□□□□□ -1.06
CALD1-218ENST00000478075 TNFRSF10AO00220 468 aa8.43□□□□□ -1.06
CALD1-218ENST00000478075 ZPR1O75312 459 aa8.43□□□□□ -1.06
CALD1-218ENST00000478075 ECM2O94769 699 aaPredicted RBP8.43□□□□□ -1.06
CALD1-218ENST00000478075 PRR14Q9BWN1 585 aa8.43□□□□□ -1.06
CALD1-218ENST00000478075 GMPR2Q9P2T1 348 aaKnown RBP8.43□□□□□ -1.06
CALD1-218ENST00000478075 ZSCAN1Q8NBB4 408 aa8.42□□□□□ -1.06
CALD1-218ENST00000478075 AVPP01185 164 aa8.41□□□□□ -1.06
CALD1-218ENST00000478075 SLC4A3P48751 1232 aa8.41□□□□□ -1.06
CALD1-218ENST00000478075 APLP1P51693 650 aa8.41□□□□□ -1.06
CALD1-218ENST00000478075 SLC16A10Q8TF71 515 aa8.41□□□□□ -1.06
CALD1-218ENST00000478075 COPS2P61201 443 aa8.4□□□□□ -1.06
CALD1-218ENST00000478075 RNF40O75150 1001 aa8.39□□□□□ -1.07
CALD1-218ENST00000478075 SMCPP49901 116 aaPredicted RBP8.39□□□□□ -1.07
CALD1-218ENST00000478075 NBPF26B4DH59 902 aa8.38□□□□□ -1.07
CALD1-218ENST00000478075 DDX27Q96GQ7 796 aaKnown RBP8.38□□□□□ -1.07
CALD1-218ENST00000478075 TSKSQ9UJT2 592 aa8.38□□□□□ -1.07
CALD1-218ENST00000478075 SENP2Q9HC62 589 aa8.37□□□□□ -1.07
CALD1-218ENST00000478075 EMID1Q96A84 441 aaPredicted RBP8.36□□□□□ -1.07
CALD1-218ENST00000478075 CERKQ8TCT0 537 aa8.35□□□□□ -1.07
CALD1-218ENST00000478075 SLF2Q8IX21 1173 aa8.34□□□□□ -1.07
CALD1-218ENST00000478075 LIAT1Q6ZQX7 453 aa8.33□□□□□ -1.08
CALD1-218ENST00000478075 DACH1Q9UI36 760 aa8.33□□□□□ -1.08
CALD1-218ENST00000478075 NCKAP5LQ9HCH0 1330 aa8.31□□□□□ -1.08
CALD1-218ENST00000478075 KIFC2Q96AC6 838 aa8.31□□□□□ -1.08
CALD1-218ENST00000478075 RBM33Q96EV2 1170 aaKnown RBP8.31□□□□□ -1.08
CALD1-218ENST00000478075 PCDHB3Q9Y5E6 796 aa8.31□□□□□ -1.08
CALD1-218ENST00000478075 TATDN2Q93075 761 aa8.3□□□□□ -1.08
CALD1-218ENST00000478075 LARP6Q9BRS8 491 aaKnown RBP8.3□□□□□ -1.08
CALD1-218ENST00000478075 CDCA7LQ96GN5 454 aa8.29□□□□□ -1.08
CALD1-218ENST00000478075 TRIM47Q96LD4 638 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms