RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 CD109Q6YHK3 1445 aa17.95■□□□□ 0.46
PRPF39-203ENST00000477626 MPHOSPH9Q99550 1183 aa17.94■□□□□ 0.46
PRPF39-203ENST00000477626 IFT172Q9UG01 1749 aa17.93■□□□□ 0.46
PRPF39-203ENST00000477626 EFCAB2Q5VUJ9 269 aa17.92■□□□□ 0.46
PRPF39-203ENST00000477626 SIN3AQ96ST3 1273 aa17.91■□□□□ 0.46
PRPF39-203ENST00000477626 SCAPERQ9BY12 1400 aa17.9■□□□□ 0.46
PRPF39-203ENST00000477626 KCNH8Q96L42 1107 aa17.89■□□□□ 0.45
PRPF39-203ENST00000477626 ZC3H13Q5T200 1668 aaKnown RBP17.88■□□□□ 0.45
PRPF39-203ENST00000477626 ZNF777Q9ULD5 760 aaPredicted RBP17.88■□□□□ 0.45
PRPF39-203ENST00000477626 TRPM2O94759 1503 aa17.88■□□□□ 0.45
PRPF39-203ENST00000477626 EFCAB6Q5THR3 1501 aa17.87■□□□□ 0.45
PRPF39-203ENST00000477626 PTPRTO14522 1441 aa17.87■□□□□ 0.45
PRPF39-203ENST00000477626 PIK3C2BO00750 1634 aa17.86■□□□□ 0.45
PRPF39-203ENST00000477626 UHRF1BP1Q6BDS2 1440 aa17.85■□□□□ 0.45
PRPF39-203ENST00000477626 CLTCL1P53675 1640 aa17.85■□□□□ 0.45
PRPF39-203ENST00000477626 TSPOAP1O95153 1857 aa17.84■□□□□ 0.45
PRPF39-203ENST00000477626 LAMC1P11047 1609 aa17.84■□□□□ 0.45
PRPF39-203ENST00000477626 CYB5RLQ6IPT4 315 aa17.84■□□□□ 0.45
PRPF39-203ENST00000477626 TRPM1Q7Z4N2 1603 aa17.83■□□□□ 0.45
PRPF39-203ENST00000477626 PPP1R15AO75807 674 aaPredicted RBP17.83■□□□□ 0.44
PRPF39-203ENST00000477626 CAMSAP1Q5T5Y3 1602 aa17.83■□□□□ 0.44
PRPF39-203ENST00000477626 DHX29Q7Z478 1369 aaKnown RBP17.82■□□□□ 0.44
PRPF39-203ENST00000477626 MROH2AA6NES4 1674 aa17.81■□□□□ 0.44
PRPF39-203ENST00000477626 AFAP1Q8N556 730 aa17.8■□□□□ 0.44
PRPF39-203ENST00000477626 A2MP01023 1474 aa17.79■□□□□ 0.44
PRPF39-203ENST00000477626 SPATA31E1Q6ZUB1 1445 aa17.79■□□□□ 0.44
PRPF39-203ENST00000477626 TSPY4P0CV99 314 aa17.78■□□□□ 0.44
PRPF39-203ENST00000477626 TSPY10P0CW01 314 aa17.78■□□□□ 0.44
PRPF39-203ENST00000477626 COL17A1Q9UMD9 1497 aaPredicted RBP17.77■□□□□ 0.44
PRPF39-203ENST00000477626 ARHGEF40Q8TER5 1519 aa17.77■□□□□ 0.44
PRPF39-203ENST00000477626 ABCC3O15438 1527 aa17.77■□□□□ 0.44
PRPF39-203ENST00000477626 AGLP35573 1532 aa17.77■□□□□ 0.43
PRPF39-203ENST00000477626 NUP155O75694 1391 aa17.76■□□□□ 0.43
PRPF39-203ENST00000477626 MADDQ8WXG6 1647 aa17.75■□□□□ 0.43
PRPF39-203ENST00000477626 FOXD1Q16676 465 aa17.75■□□□□ 0.43
PRPF39-203ENST00000477626 SPAG9O60271 1321 aaKnown RBP17.74■□□□□ 0.43
PRPF39-203ENST00000477626 KIAA1210Q9ULL0 1709 aa17.73■□□□□ 0.43
PRPF39-203ENST00000477626 ZNF316A6NFI3 1004 aaPredicted RBP17.73■□□□□ 0.43
PRPF39-203ENST00000477626 SYNMO15061 1565 aa17.73■□□□□ 0.43
PRPF39-203ENST00000477626 YEATS2Q9ULM3 1422 aa17.71■□□□□ 0.43
PRPF39-203ENST00000477626 PPLO60437 1756 aa17.71■□□□□ 0.43
PRPF39-203ENST00000477626 RALGAPBQ86X10 1494 aa17.71■□□□□ 0.42
PRPF39-203ENST00000477626 ADGRB3O60242 1522 aa17.69■□□□□ 0.42
PRPF39-203ENST00000477626 IQGAP1P46940 1657 aa17.69■□□□□ 0.42
PRPF39-203ENST00000477626 KIF1BO60333 1816 aa17.69■□□□□ 0.42
PRPF39-203ENST00000477626 DNAJC5Q9H3Z4 198 aa17.69■□□□□ 0.42
PRPF39-203ENST00000477626 PREX1Q8TCU6 1659 aa17.68■□□□□ 0.42
PRPF39-203ENST00000477626 NRXN1Q9ULB1 1477 aa17.68■□□□□ 0.42
PRPF39-203ENST00000477626 PKD2Q13563 968 aa17.68■□□□□ 0.42
PRPF39-203ENST00000477626 SLC4A1APQ9BWU0 796 aaKnown RBP17.68■□□□□ 0.42
PRPF39-203ENST00000477626 NPM1P06748 294 aaKnown RBP eCLIP17.68■□□□□ 0.42
PRPF39-203ENST00000477626 ARHGAP31Q2M1Z3 1444 aa17.66■□□□□ 0.42
PRPF39-203ENST00000477626 NBPF8Q3BBV2 869 aa17.64■□□□□ 0.42
PRPF39-203ENST00000477626 L3MBTL2Q969R5 705 aa17.64■□□□□ 0.42
PRPF39-203ENST00000477626 TONSLQ96HA7 1378 aa17.64■□□□□ 0.41
PRPF39-203ENST00000477626 TRIM52Q96A61 297 aa17.64■□□□□ 0.41
PRPF39-203ENST00000477626 UGGT1Q9NYU2 1555 aa17.64■□□□□ 0.41
PRPF39-203ENST00000477626 NOS1P29475 1434 aa17.64■□□□□ 0.41
PRPF39-203ENST00000477626 PRAG1Q86YV5 1406 aa17.63■□□□□ 0.41
PRPF39-203ENST00000477626 MYO5BQ9ULV0 1848 aa17.63■□□□□ 0.41
PRPF39-203ENST00000477626 NPATQ14207 1427 aa17.62■□□□□ 0.41
PRPF39-203ENST00000477626 NEUROD1Q13562 356 aa17.61■□□□□ 0.41
PRPF39-203ENST00000477626 GPRASP1Q5JY77 1395 aa17.61■□□□□ 0.41
PRPF39-203ENST00000477626 MYOM2P54296 1465 aa17.59■□□□□ 0.41
PRPF39-203ENST00000477626 TMEM131LA2VDJ0 1609 aa17.58■□□□□ 0.41
PRPF39-203ENST00000477626 MYO3AQ8NEV4 1616 aa17.58■□□□□ 0.41
PRPF39-203ENST00000477626 CLTCQ00610 1675 aaKnown RBP17.58■□□□□ 0.41
PRPF39-203ENST00000477626 KDM5AP29375 1690 aaKnown RBP17.57■□□□□ 0.4
PRPF39-203ENST00000477626 SETD1AO15047 1707 aaKnown RBP17.56■□□□□ 0.4
PRPF39-203ENST00000477626 RAPGEF3O95398 923 aa17.56■□□□□ 0.4
PRPF39-203ENST00000477626 SPATA31D1Q6ZQQ2 1576 aa17.56■□□□□ 0.4
PRPF39-203ENST00000477626 CCDC144AA2RUR9 1427 aa17.55■□□□□ 0.4
PRPF39-203ENST00000477626 FAM69CQ0P6D2 419 aa17.55■□□□□ 0.4
PRPF39-203ENST00000477626 CNTLNQ9NXG0 1405 aa17.53■□□□□ 0.4
PRPF39-203ENST00000477626 NEXMIFQ5QGS0 1516 aa17.53■□□□□ 0.4
PRPF39-203ENST00000477626 SETBP1Q9Y6X0 1596 aa17.51■□□□□ 0.39
PRPF39-203ENST00000477626 DIEXFQ68CQ4 756 aaKnown RBP17.48■□□□□ 0.39
PRPF39-203ENST00000477626 ADGRB1O14514 1584 aa17.48■□□□□ 0.39
PRPF39-203ENST00000477626 MYOM1P52179 1685 aa17.47■□□□□ 0.39
PRPF39-203ENST00000477626 CFAP65Q6ZU64 1925 aaKnown RBP17.47■□□□□ 0.39
PRPF39-203ENST00000477626 ERVK-7P63135 1459 aa17.44■□□□□ 0.38
PRPF39-203ENST00000477626 KIF3BO15066 747 aa17.44■□□□□ 0.38
PRPF39-203ENST00000477626 KANK1Q14678 1352 aa17.43■□□□□ 0.38
PRPF39-203ENST00000477626 NRXN3Q9Y4C0 1643 aa17.43■□□□□ 0.38
PRPF39-203ENST00000477626 C11orf95C9JLR9 678 aaPredicted RBP17.42■□□□□ 0.38
PRPF39-203ENST00000477626 PIK3C2GO75747 1445 aa17.41■□□□□ 0.38
PRPF39-203ENST00000477626 WASHC2AQ641Q2 1341 aa17.41■□□□□ 0.38
PRPF39-203ENST00000477626 ASXL1Q8IXJ9 1541 aa17.41■□□□□ 0.38
PRPF39-203ENST00000477626 C3P01024 1663 aa17.41■□□□□ 0.38
PRPF39-203ENST00000477626 ARHGEF28Q8N1W1 1705 aaKnown RBP17.4■□□□□ 0.38
PRPF39-203ENST00000477626 UBR1Q8IWV7 1749 aa17.4■□□□□ 0.38
PRPF39-203ENST00000477626 HSPA5P11021 654 aaKnown RBP17.39■□□□□ 0.37
PRPF39-203ENST00000477626 ZFYVE9O95405 1425 aa17.39■□□□□ 0.37
PRPF39-203ENST00000477626 FER1L4A9Z1Z3 1794 aa17.37■□□□□ 0.37
PRPF39-203ENST00000477626 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.36■□□□□ 0.372e-6■■□□□ 11.5
PRPF39-203ENST00000477626 USP47Q96K76 1375 aa17.36■□□□□ 0.37
PRPF39-203ENST00000477626 CCDC7Q96M83 1385 aa17.35■□□□□ 0.37
PRPF39-203ENST00000477626 PPP6R1Q9UPN7 881 aa17.34■□□□□ 0.37
PRPF39-203ENST00000477626 ADAMTSL3P82987 1691 aa17.34■□□□□ 0.37
PRPF39-203ENST00000477626 MIER1Q8N108 512 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms