RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 BRD4O60885 1362 aaPredicted RBP23.62■■□□□ 1.37
CCM2-207ENST00000475551 KTN1Q86UP2 1357 aaKnown RBP23.62■■□□□ 1.37
CCM2-207ENST00000475551 KIF15Q9NS87 1388 aa23.61■■□□□ 1.37
CCM2-207ENST00000475551 ATP10BO94823 1461 aa23.61■■□□□ 1.37
CCM2-207ENST00000475551 PZPP20742 1482 aa23.6■■□□□ 1.37
CCM2-207ENST00000475551 CNGB1Q14028 1251 aaPredicted RBP23.6■■□□□ 1.37
CCM2-207ENST00000475551 LAS1LQ9Y4W2 734 aaKnown RBP23.6■■□□□ 1.37
CCM2-207ENST00000475551 POLR3GLQ9BT43 218 aa23.59■■□□□ 1.37
CCM2-207ENST00000475551 RCAN3Q9UKA8 241 aa23.58■■□□□ 1.37
CCM2-207ENST00000475551 MYBBP1AQ9BQG0 1328 aaKnown RBP23.56■■□□□ 1.36
CCM2-207ENST00000475551 RALBP1Q15311 655 aa23.55■■□□□ 1.36
CCM2-207ENST00000475551 ZCCHC11Q5TAX3 1644 aaKnown RBP23.54■■□□□ 1.36
CCM2-207ENST00000475551 PDE3BQ13370 1112 aa23.54■■□□□ 1.36
CCM2-207ENST00000475551 SENP3-EIF4A1A0A087X0R7 540 aa23.54■■□□□ 1.36
CCM2-207ENST00000475551 UHRF1BP1Q6BDS2 1440 aa23.53■■□□□ 1.36
CCM2-207ENST00000475551 KIAA1107Q9UPP5 1409 aa23.53■■□□□ 1.36
CCM2-207ENST00000475551 RTN4Q9NQC3 1192 aaKnown RBP23.53■■□□□ 1.36
CCM2-207ENST00000475551 DDRGK1Q96HY6 314 aa23.53■■□□□ 1.36
CCM2-207ENST00000475551 RALGAPBQ86X10 1494 aa23.52■■□□□ 1.36
CCM2-207ENST00000475551 NPM1P06748 294 aaKnown RBP eCLIP23.48■■□□□ 1.35
CCM2-207ENST00000475551 ZNF326Q5BKZ1 582 aaKnown RBP23.47■■□□□ 1.35
CCM2-207ENST00000475551 PLEKHD1A6NEE1 506 aa23.46■■□□□ 1.35
CCM2-207ENST00000475551 ZNF644Q9H582 1327 aaPredicted RBP23.45■■□□□ 1.34
CCM2-207ENST00000475551 E9PCH4 1651 aa23.44■■□□□ 1.34
CCM2-207ENST00000475551 GSE1Q14687 1217 aa23.44■■□□□ 1.34
CCM2-207ENST00000475551 TROQ12816 1431 aaPredicted RBP23.42■■□□□ 1.34
CCM2-207ENST00000475551 CARD11Q9BXL7 1154 aa23.42■■□□□ 1.34
CCM2-207ENST00000475551 ADGBQ8N7X0 1667 aa23.41■■□□□ 1.34
CCM2-207ENST00000475551 ARHGEF12Q9NZN5 1544 aa23.41■■□□□ 1.34
CCM2-207ENST00000475551 NLRP13Q86W25 1043 aa23.41■■□□□ 1.34
CCM2-207ENST00000475551 PKD2Q13563 968 aa23.4■■□□□ 1.34
CCM2-207ENST00000475551 ADGRL2O95490 1459 aa23.4■■□□□ 1.34
CCM2-207ENST00000475551 INSRP06213 1382 aa23.39■■□□□ 1.33
CCM2-207ENST00000475551 ASXL2Q76L83 1435 aa23.39■■□□□ 1.33
CCM2-207ENST00000475551 PARD3Q8TEW0 1356 aa23.38■■□□□ 1.33
CCM2-207ENST00000475551 NFKBIBQ15653 356 aa23.37■■□□□ 1.33
CCM2-207ENST00000475551 ST20-MTHFSA0A0A6YYL1 179 aa23.36■■□□□ 1.33
CCM2-207ENST00000475551 ZMYM4Q5VZL5 1548 aa23.35■■□□□ 1.33
CCM2-207ENST00000475551 WDR7Q9Y4E6 1490 aa23.35■■□□□ 1.33
CCM2-207ENST00000475551 CAMSAP2Q08AD1 1489 aa23.35■■□□□ 1.33
CCM2-207ENST00000475551 BRPF3Q9ULD4 1205 aa23.35■■□□□ 1.33
CCM2-207ENST00000475551 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.33■■□□□ 1.33
CCM2-207ENST00000475551 CDCA7LQ96GN5 454 aa23.32■■□□□ 1.32
CCM2-207ENST00000475551 CRBNQ96SW2 442 aa23.32■■□□□ 1.32
CCM2-207ENST00000475551 BLMP54132 1417 aaPredicted RBP23.3■■□□□ 1.32
CCM2-207ENST00000475551 CROCC2H7BZ55 1655 aa23.29■■□□□ 1.32
CCM2-207ENST00000475551 PLIN1O60240 522 aa23.29■■□□□ 1.32
CCM2-207ENST00000475551 ANKRD30AQ9BXX3 1397 aa23.28■■□□□ 1.32
CCM2-207ENST00000475551 ITSN2Q9NZM3 1697 aa23.28■■□□□ 1.32
CCM2-207ENST00000475551 FRAT1Q92837 279 aaPredicted RBP23.28■■□□□ 1.32
CCM2-207ENST00000475551 KDM2BQ8NHM5 1336 aa23.28■■□□□ 1.32
CCM2-207ENST00000475551 PLEKHH2Q8IVE3 1493 aa23.28■■□□□ 1.32
CCM2-207ENST00000475551 CFDP1Q9UEE9 299 aaPredicted RBP23.26■■□□□ 1.31
CCM2-207ENST00000475551 ANKRD50Q9ULJ7 1429 aa23.26■■□□□ 1.31
CCM2-207ENST00000475551 DAXXQ9UER7 740 aaPredicted RBP23.26■■□□□ 1.31
CCM2-207ENST00000475551 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.25■■□□□ 1.31
CCM2-207ENST00000475551 ABCC10Q5T3U5 1492 aa23.25■■□□□ 1.31
CCM2-207ENST00000475551 SKAP1Q86WV1 359 aa23.25■■□□□ 1.31
CCM2-207ENST00000475551 PER1O15534 1290 aaPredicted RBP23.24■■□□□ 1.31
CCM2-207ENST00000475551 UBE2Q2Q8WVN8 375 aa23.24■■□□□ 1.31
CCM2-207ENST00000475551 TTC37Q6PGP7 1564 aa23.24■■□□□ 1.31
CCM2-207ENST00000475551 CENPQQ7L2Z9 268 aaPredicted RBP23.23■■□□□ 1.31
CCM2-207ENST00000475551 GPATCH8Q9UKJ3 1502 aaKnown RBP23.23■■□□□ 1.31
CCM2-207ENST00000475551 KDM5DQ9BY66 1539 aa23.22■■□□□ 1.31
CCM2-207ENST00000475551 FAM161AQ3B820 660 aa23.21■■□□□ 1.31
CCM2-207ENST00000475551 SLC4A3P48751 1232 aa23.2■■□□□ 1.3
CCM2-207ENST00000475551 NUP155O75694 1391 aa23.2■■□□□ 1.3
CCM2-207ENST00000475551 KDM2AQ9Y2K7 1162 aa23.2■■□□□ 1.3
CCM2-207ENST00000475551 C8orf34Q49A92 452 aa23.18■■□□□ 1.3
CCM2-207ENST00000475551 DCAF11Q8TEB1 546 aa23.18■■□□□ 1.3
CCM2-207ENST00000475551 CDC42BPAQ5VT25 1732 aa23.17■■□□□ 1.3
CCM2-207ENST00000475551 ABCA9Q8IUA7 1624 aa23.16■■□□□ 1.3
CCM2-207ENST00000475551 C20orf194Q5TEA3 1177 aa23.16■■□□□ 1.3
CCM2-207ENST00000475551 SHANK2Q9UPX8 1470 aa23.14■■□□□ 1.3
CCM2-207ENST00000475551 DIP2BQ9P265 1576 aa23.14■■□□□ 1.3
CCM2-207ENST00000475551 FAM69CQ0P6D2 419 aa23.14■■□□□ 1.29
CCM2-207ENST00000475551 TRPM1Q7Z4N2 1603 aa23.13■■□□□ 1.29
CCM2-207ENST00000475551 FAM43AQ8N2R8 423 aa23.13■■□□□ 1.29
CCM2-207ENST00000475551 MYO5CQ9NQX4 1742 aa23.12■■□□□ 1.29
CCM2-207ENST00000475551 COL17A1Q9UMD9 1497 aaPredicted RBP23.12■■□□□ 1.29
CCM2-207ENST00000475551 ZNF777Q9ULD5 760 aaPredicted RBP23.11■■□□□ 1.29
CCM2-207ENST00000475551 CDC42BPBQ9Y5S2 1711 aa23.11■■□□□ 1.29
CCM2-207ENST00000475551 PREX2Q70Z35 1606 aa23.11■■□□□ 1.29
CCM2-207ENST00000475551 PRAG1Q86YV5 1406 aa23.11■■□□□ 1.29
CCM2-207ENST00000475551 FRAT2O75474 233 aaPredicted RBP23.1■■□□□ 1.29
CCM2-207ENST00000475551 RSPH6AQ9H0K4 717 aa23.09■■□□□ 1.29
CCM2-207ENST00000475551 PLCH2O75038 1416 aa23.09■■□□□ 1.29
CCM2-207ENST00000475551 GPRASP1Q5JY77 1395 aa23.09■■□□□ 1.29
CCM2-207ENST00000475551 CD109Q6YHK3 1445 aa23.09■■□□□ 1.29
CCM2-207ENST00000475551 ARHGAP5Q13017 1502 aa23.09■■□□□ 1.29
CCM2-207ENST00000475551 GLI2P10070 1586 aa23.08■■□□□ 1.29
CCM2-207ENST00000475551 CC2D1BQ5T0F9 858 aaKnown RBP23.08■■□□□ 1.29
CCM2-207ENST00000475551 C9orf84Q5VXU9 1444 aa23.07■■□□□ 1.28
CCM2-207ENST00000475551 LAMC1P11047 1609 aa23.06■■□□□ 1.28
CCM2-207ENST00000475551 KIF13AQ9H1H9 1805 aa23.06■■□□□ 1.28
CCM2-207ENST00000475551 DUSP27Q5VZP5 1158 aa23.06■■□□□ 1.28
CCM2-207ENST00000475551 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.06■■□□□ 1.28
CCM2-207ENST00000475551 MAP3K4Q9Y6R4 1608 aa23.05■■□□□ 1.28
CCM2-207ENST00000475551 EIF5BO60841 1220 aaKnown RBP23.04■■□□□ 1.28
CCM2-207ENST00000475551 PANK3Q9H999 370 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms