RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 CCDC141Q6ZP82 1450 aa17.64■□□□□ 0.41
CCNL1-216ENST00000475298 KDM2AQ9Y2K7 1162 aa17.64■□□□□ 0.41
CCNL1-216ENST00000475298 TTC37Q6PGP7 1564 aa17.64■□□□□ 0.41
CCNL1-216ENST00000475298 KDM5DQ9BY66 1539 aa17.63■□□□□ 0.41
CCNL1-216ENST00000475298 SYCP2Q9BX26 1530 aa17.62■□□□□ 0.41
CCNL1-216ENST00000475298 KDM5CP41229 1560 aa17.62■□□□□ 0.41
CCNL1-216ENST00000475298 SHROOM2Q13796 1616 aa17.61■□□□□ 0.41
CCNL1-216ENST00000475298 ARHGAP5Q13017 1502 aa17.6■□□□□ 0.41
CCNL1-216ENST00000475298 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.6■□□□□ 0.412e-6■■□□□ 13.5
CCNL1-216ENST00000475298 B4GALNT3Q6L9W6 998 aa17.6■□□□□ 0.41
CCNL1-216ENST00000475298 DCAF11Q8TEB1 546 aa17.59■□□□□ 0.41
CCNL1-216ENST00000475298 FAM135AQ9P2D6 1515 aa17.59■□□□□ 0.41
CCNL1-216ENST00000475298 UHRF1BP1Q6BDS2 1440 aa17.59■□□□□ 0.41
CCNL1-216ENST00000475298 DHX29Q7Z478 1369 aaKnown RBP17.58■□□□□ 0.41
CCNL1-216ENST00000475298 RTL5Q5HYW3 569 aaPredicted RBP17.58■□□□□ 0.41
CCNL1-216ENST00000475298 CARD11Q9BXL7 1154 aa17.58■□□□□ 0.41
CCNL1-216ENST00000475298 RALGAPBQ86X10 1494 aa17.58■□□□□ 0.4
CCNL1-216ENST00000475298 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.57■□□□□ 0.45e-8■■■□□ 14.9
CCNL1-216ENST00000475298 ARHGEF12Q9NZN5 1544 aa17.56■□□□□ 0.4
CCNL1-216ENST00000475298 ABCC2Q92887 1545 aa17.55■□□□□ 0.4
CCNL1-216ENST00000475298 IPO9Q96P70 1041 aaKnown RBP17.55■□□□□ 0.4
CCNL1-216ENST00000475298 ST20-MTHFSA0A0A6YYL1 179 aa17.53■□□□□ 0.4
CCNL1-216ENST00000475298 RSPH4AQ5TD94 716 aa17.53■□□□□ 0.4
CCNL1-216ENST00000475298 MYO5CQ9NQX4 1742 aa17.52■□□□□ 0.4
CCNL1-216ENST00000475298 RGL3Q3MIN7 710 aa17.52■□□□□ 0.39
CCNL1-216ENST00000475298 PLEKHH2Q8IVE3 1493 aa17.5■□□□□ 0.39
CCNL1-216ENST00000475298 MAST1Q9Y2H9 1570 aa17.49■□□□□ 0.39
CCNL1-216ENST00000475298 ZBED9Q6R2W3 1325 aa17.49■□□□□ 0.39
CCNL1-216ENST00000475298 SENP3-EIF4A1A0A087X0R7 540 aa17.49■□□□□ 0.39
CCNL1-216ENST00000475298 CCDC144AA2RUR9 1427 aa17.49■□□□□ 0.39
CCNL1-216ENST00000475298 ROCK2O75116 1388 aaKnown RBP17.49■□□□□ 0.39
CCNL1-216ENST00000475298 PLA2R1Q13018 1463 aa17.49■□□□□ 0.39
CCNL1-216ENST00000475298 UNC13BO14795 1591 aa17.48■□□□□ 0.39
CCNL1-216ENST00000475298 ZBTB47Q9UFB7 747 aaPredicted RBP17.47■□□□□ 0.39
CCNL1-216ENST00000475298 ZCCHC11Q5TAX3 1644 aaKnown RBP17.47■□□□□ 0.39
CCNL1-216ENST00000475298 ANP32AP39687 249 aaKnown RBP17.47■□□□□ 0.39
CCNL1-216ENST00000475298 ARID4BQ4LE39 1312 aaPredicted RBP17.47■□□□□ 0.39
CCNL1-216ENST00000475298 NBPF1Q3BBV0 1214 aa17.45■□□□□ 0.38
CCNL1-216ENST00000475298 PLXNC1O60486 1568 aa17.45■□□□□ 0.38
CCNL1-216ENST00000475298 PRAG1Q86YV5 1406 aa17.45■□□□□ 0.38
CCNL1-216ENST00000475298 WASHC2CQ9Y4E1 1318 aa17.45■□□□□ 0.38
CCNL1-216ENST00000475298 CLASP1Q7Z460 1538 aa17.43■□□□□ 0.38
CCNL1-216ENST00000475298 TRPM1Q7Z4N2 1603 aa17.43■□□□□ 0.38
CCNL1-216ENST00000475298 PLCH2O75038 1416 aa17.43■□□□□ 0.38
CCNL1-216ENST00000475298 IQGAP3Q86VI3 1631 aa17.43■□□□□ 0.38
CCNL1-216ENST00000475298 A2MP01023 1474 aa17.43■□□□□ 0.38
CCNL1-216ENST00000475298 TRAPPC8Q9Y2L5 1435 aa17.41■□□□□ 0.38
CCNL1-216ENST00000475298 DUOX2Q9NRD8 1548 aa17.41■□□□□ 0.38
CCNL1-216ENST00000475298 EFCAB2Q5VUJ9 269 aa17.4■□□□□ 0.38
CCNL1-216ENST00000475298 ABCC1P33527 1531 aa17.38■□□□□ 0.37
CCNL1-216ENST00000475298 OSCARQ8IYS5 282 aa17.37■□□□□ 0.37
CCNL1-216ENST00000475298 TMC1Q8TDI8 760 aa17.37■□□□□ 0.37
CCNL1-216ENST00000475298 PNISRQ8TF01 805 aaKnown RBP17.37■□□□□ 0.37
CCNL1-216ENST00000475298 E9PCH4 1651 aa17.37■□□□□ 0.37
CCNL1-216ENST00000475298 ERBINQ96RT1 1412 aa17.37■□□□□ 0.37
CCNL1-216ENST00000475298 UHRF1BP1LA0JNW5 1464 aa17.36■□□□□ 0.37
CCNL1-216ENST00000475298 AFAP1Q8N556 730 aa17.36■□□□□ 0.37
CCNL1-216ENST00000475298 MAGI2Q86UL8 1455 aa17.36■□□□□ 0.37
CCNL1-216ENST00000475298 USP35Q9P2H5 1018 aa17.36■□□□□ 0.37
CCNL1-216ENST00000475298 BRPF3Q9ULD4 1205 aa17.35■□□□□ 0.37
CCNL1-216ENST00000475298 NEFMP07197 916 aa17.34■□□□□ 0.37
CCNL1-216ENST00000475298 EIF5BO60841 1220 aaKnown RBP17.32■□□□□ 0.36
CCNL1-216ENST00000475298 GPRASP1Q5JY77 1395 aa17.32■□□□□ 0.36
CCNL1-216ENST00000475298 DISP3Q9P2K9 1392 aa17.32■□□□□ 0.36
CCNL1-216ENST00000475298 SPAG9O60271 1321 aaKnown RBP17.32■□□□□ 0.36
CCNL1-216ENST00000475298 MYBBP1AQ9BQG0 1328 aaKnown RBP17.32■□□□□ 0.36
CCNL1-216ENST00000475298 SMG6Q86US8 1419 aaKnown RBP17.31■□□□□ 0.36
CCNL1-216ENST00000475298 PRDM15P57071 1507 aaPredicted RBP17.31■□□□□ 0.36
CCNL1-216ENST00000475298 ATP10AO60312 1499 aa17.3■□□□□ 0.36
CCNL1-216ENST00000475298 TESK2Q96S53 571 aa17.3■□□□□ 0.36
CCNL1-216ENST00000475298 RIMBP3CA6NJZ7 1639 aa17.3■□□□□ 0.36
CCNL1-216ENST00000475298 RIMBP3BA6NNM3 1639 aa17.3■□□□□ 0.36
CCNL1-216ENST00000475298 RIMBP3Q9UFD9 1639 aa17.3■□□□□ 0.36
CCNL1-216ENST00000475298 LAS1LQ9Y4W2 734 aaKnown RBP17.3■□□□□ 0.36
CCNL1-216ENST00000475298 NUDCQ9Y266 331 aa17.29■□□□□ 0.36
CCNL1-216ENST00000475298 RALBP1Q15311 655 aa17.29■□□□□ 0.36
CCNL1-216ENST00000475298 PKNOX2Q96KN3 472 aa17.29■□□□□ 0.36
CCNL1-216ENST00000475298 COL17A1Q9UMD9 1497 aaPredicted RBP17.29■□□□□ 0.36
CCNL1-216ENST00000475298 ZFYVE16Q7Z3T8 1539 aa17.28■□□□□ 0.36
CCNL1-216ENST00000475298 BRD4O60885 1362 aaPredicted RBP17.28■□□□□ 0.36
CCNL1-216ENST00000475298 LRPPRCP42704 1394 aaKnown RBP17.27■□□□□ 0.35
CCNL1-216ENST00000475298 LAMC1P11047 1609 aa17.27■□□□□ 0.35
CCNL1-216ENST00000475298 EIF2AK4Q9P2K8 1649 aaKnown RBP17.27■□□□□ 0.35
CCNL1-216ENST00000475298 PER1O15534 1290 aaPredicted RBP17.26■□□□□ 0.35
CCNL1-216ENST00000475298 CC2D1BQ5T0F9 858 aaKnown RBP17.25■□□□□ 0.35
CCNL1-216ENST00000475298 KTN1Q86UP2 1357 aaKnown RBP17.25■□□□□ 0.35
CCNL1-216ENST00000475298 PARD3Q8TEW0 1356 aa17.25■□□□□ 0.35
CCNL1-216ENST00000475298 WDR7Q9Y4E6 1490 aa17.25■□□□□ 0.35
CCNL1-216ENST00000475298 RNF123Q5XPI4 1314 aa17.24■□□□□ 0.35
CCNL1-216ENST00000475298 PANK3Q9H999 370 aa17.23■□□□□ 0.35
CCNL1-216ENST00000475298 FANCAO15360 1455 aa17.23■□□□□ 0.35
CCNL1-216ENST00000475298 RTEL1-TNFRSF6BF6WH68 1400 aa17.22■□□□□ 0.35
CCNL1-216ENST00000475298 RNF17Q9BXT8 1623 aaKnown RBP17.22■□□□□ 0.35
CCNL1-216ENST00000475298 NLRP13Q86W25 1043 aa17.22■□□□□ 0.35
CCNL1-216ENST00000475298 ARAP3Q8WWN8 1544 aa17.22■□□□□ 0.35
CCNL1-216ENST00000475298 TMF1P82094 1093 aa17.21■□□□□ 0.35
CCNL1-216ENST00000475298 CLTCL1P53675 1640 aa17.21■□□□□ 0.35
CCNL1-216ENST00000475298 MADDQ8WXG6 1647 aa17.21■□□□□ 0.35
CCNL1-216ENST00000475298 TRPM2O94759 1503 aa17.2■□□□□ 0.34
CCNL1-216ENST00000475298 ATP7AQ04656 1500 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms