RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 RSPH4AQ5TD94 716 aa12.26□□□□□ -0.45
CDH23-211ENST00000475158 CFTRP13569 1480 aa12.25□□□□□ -0.45
CDH23-211ENST00000475158 LTV1Q96GA3 475 aaPredicted RBP12.25□□□□□ -0.45
CDH23-211ENST00000475158 KIF15Q9NS87 1388 aa12.25□□□□□ -0.45
CDH23-211ENST00000475158 MINK1Q8N4C8 1332 aaPredicted RBP12.25□□□□□ -0.45
CDH23-211ENST00000475158 CRBNQ96SW2 442 aa12.24□□□□□ -0.45
CDH23-211ENST00000475158 NBPF1Q3BBV0 1214 aa12.24□□□□□ -0.45
CDH23-211ENST00000475158 ZBED9Q6R2W3 1325 aa12.24□□□□□ -0.45
CDH23-211ENST00000475158 CCDC7Q96M83 1385 aa12.24□□□□□ -0.45
CDH23-211ENST00000475158 COG6Q9Y2V7 657 aa12.24□□□□□ -0.45
CDH23-211ENST00000475158 NCOA2Q15596 1464 aa12.24□□□□□ -0.45
CDH23-211ENST00000475158 MFAP1P55081 439 aaKnown RBP12.23□□□□□ -0.45
CDH23-211ENST00000475158 CASC1Q6TDU7 716 aa12.23□□□□□ -0.45
CDH23-211ENST00000475158 UACAQ9BZF9 1416 aa12.23□□□□□ -0.45
CDH23-211ENST00000475158 MS4A1P11836 297 aa12.23□□□□□ -0.45
CDH23-211ENST00000475158 RTF1Q92541 710 aaKnown RBP12.23□□□□□ -0.45
CDH23-211ENST00000475158 TMEM132EQ6IEE7 984 aa12.23□□□□□ -0.45
CDH23-211ENST00000475158 CENPJQ9HC77 1338 aaPredicted RBP12.23□□□□□ -0.45
CDH23-211ENST00000475158 MSH5O43196 834 aa12.22□□□□□ -0.45
CDH23-211ENST00000475158 CDCA7LQ96GN5 454 aa12.22□□□□□ -0.45
CDH23-211ENST00000475158 KCNJ4P48050 445 aa12.22□□□□□ -0.45
CDH23-211ENST00000475158 SLC4A10Q6U841 1118 aa12.22□□□□□ -0.45
CDH23-211ENST00000475158 FOXD4L1Q9NU39 408 aa12.22□□□□□ -0.45
CDH23-211ENST00000475158 PRXQ9BXM0 1461 aa12.21□□□□□ -0.45
CDH23-211ENST00000475158 CDK11BP21127 795 aaKnown RBP12.21□□□□□ -0.45
CDH23-211ENST00000475158 RRP1P56182 461 aaKnown RBP12.21□□□□□ -0.45
CDH23-211ENST00000475158 HSCBQ8IWL3 235 aa12.21□□□□□ -0.45
CDH23-211ENST00000475158 UBE2Q2Q8WVN8 375 aa12.21□□□□□ -0.45
CDH23-211ENST00000475158 NAP1L2Q9ULW6 460 aaPredicted RBP12.21□□□□□ -0.45
CDH23-211ENST00000475158 PTMAP06454 111 aaKnown RBP12.2□□□□□ -0.46
CDH23-211ENST00000475158 TERF2IPQ9NYB0 399 aa12.2□□□□□ -0.46
CDH23-211ENST00000475158 ZNF330Q9Y3S2 320 aaPredicted RBP12.2□□□□□ -0.46
CDH23-211ENST00000475158 BRPF3Q9ULD4 1205 aa12.2□□□□□ -0.46
CDH23-211ENST00000475158 IPO8O15397 1037 aaKnown RBP12.19□□□□□ -0.46
CDH23-211ENST00000475158 RWDD1Q9H446 243 aaPredicted RBP12.19□□□□□ -0.46
CDH23-211ENST00000475158 ANKRD50Q9ULJ7 1429 aa12.19□□□□□ -0.46
CDH23-211ENST00000475158 CUX1P39880 1505 aa12.19□□□□□ -0.46
CDH23-211ENST00000475158 PDE4AP27815 886 aa12.19□□□□□ -0.46
CDH23-211ENST00000475158 PDE3BQ13370 1112 aa12.19□□□□□ -0.46
CDH23-211ENST00000475158 RRBP1Q9P2E9 1410 aaKnown RBP12.19□□□□□ -0.46
CDH23-211ENST00000475158 HDGFP51858 240 aaKnown RBP12.18□□□□□ -0.46
CDH23-211ENST00000475158 FGD1P98174 961 aa12.18□□□□□ -0.46
CDH23-211ENST00000475158 CASKIN1Q8WXD9 1431 aa12.18□□□□□ -0.46
CDH23-211ENST00000475158 EIF3AQ14152 1382 aaKnown RBP12.18□□□□□ -0.46
CDH23-211ENST00000475158 NGDNQ8NEJ9 315 aaKnown RBP12.18□□□□□ -0.46
CDH23-211ENST00000475158 CFAP70Q5T0N1 1121 aa12.17□□□□□ -0.46
CDH23-211ENST00000475158 GSE1Q14687 1217 aa12.17□□□□□ -0.46
CDH23-211ENST00000475158 NOL8Q76FK4 1167 aaKnown RBP12.16□□□□□ -0.46
CDH23-211ENST00000475158 ADAMTS8Q9UP79 889 aa12.16□□□□□ -0.46
CDH23-211ENST00000475158 PRDM2Q13029 1718 aa12.16□□□□□ -0.46
CDH23-211ENST00000475158 DNTTIP2Q5QJE6 756 aaKnown RBP12.15□□□□□ -0.46
CDH23-211ENST00000475158 CHMP4BQ9H444 224 aaKnown RBP12.15□□□□□ -0.46
CDH23-211ENST00000475158 GGNBP2Q9H3C7 697 aa12.15□□□□□ -0.46
CDH23-211ENST00000475158 PRG4Q92954 1404 aaPredicted RBP12.15□□□□□ -0.47
CDH23-211ENST00000475158 C11orf95C9JLR9 678 aaPredicted RBP12.13□□□□□ -0.47
CDH23-211ENST00000475158 AMPHP49418 695 aa12.13□□□□□ -0.47
CDH23-211ENST00000475158 POLA1P09884 1462 aaPredicted RBP12.13□□□□□ -0.47
CDH23-211ENST00000475158 CSB-PGBD3P0DP91 1061 aa12.13□□□□□ -0.47
CDH23-211ENST00000475158 L1TD1Q5T7N2 865 aaKnown RBP12.12□□□□□ -0.47
CDH23-211ENST00000475158 NECTIN2Q92692 538 aa12.12□□□□□ -0.47
CDH23-211ENST00000475158 VGFO15240 615 aaPredicted RBP12.12□□□□□ -0.47
CDH23-211ENST00000475158 CABP2Q9NPB3 220 aa12.12□□□□□ -0.47
CDH23-211ENST00000475158 CNTLNQ9NXG0 1405 aa12.12□□□□□ -0.47
CDH23-211ENST00000475158 WDR97A6NE52 1622 aa12.12□□□□□ -0.47
CDH23-211ENST00000475158 HMOX1P09601 288 aa12.11□□□□□ -0.47
CDH23-211ENST00000475158 USP35Q9P2H5 1018 aa12.11□□□□□ -0.47
CDH23-211ENST00000475158 FOXD4L5Q5VV16 416 aaPredicted RBP12.11□□□□□ -0.47
CDH23-211ENST00000475158 PMFBP1Q8TBY8 1022 aa12.11□□□□□ -0.47
CDH23-211ENST00000475158 FOXD4L4Q8WXT5 416 aaPredicted RBP12.11□□□□□ -0.47
CDH23-211ENST00000475158 PANK1Q8TE04 598 aa12.11□□□□□ -0.47
CDH23-211ENST00000475158 ERICH3Q5RHP9 1530 aa12.11□□□□□ -0.47
CDH23-211ENST00000475158 CGNL1Q0VF96 1302 aa12.11□□□□□ -0.47
CDH23-211ENST00000475158 TRIM6-TRIM34B2RNG4 842 aa12.1□□□□□ -0.47
CDH23-211ENST00000475158 STK31Q9BXU1 1019 aa12.1□□□□□ -0.47
CDH23-211ENST00000475158 EVC2Q86UK5 1308 aa12.09□□□□□ -0.47
CDH23-211ENST00000475158 TOPBP1Q92547 1522 aa12.09□□□□□ -0.47
CDH23-211ENST00000475158 E9PSI1 815 aa12.09□□□□□ -0.47
CDH23-211ENST00000475158 ANKRD45Q5TZF3 282 aa12.09□□□□□ -0.47
CDH23-211ENST00000475158 FYCO1Q9BQS8 1478 aa12.09□□□□□ -0.47
CDH23-211ENST00000475158 TOP2BQ02880 1626 aa12.09□□□□□ -0.47
CDH23-211ENST00000475158 AKNAQ7Z591 1439 aa12.09□□□□□ -0.47
CDH23-211ENST00000475158 NPHP1O15259 732 aa12.08□□□□□ -0.48
CDH23-211ENST00000475158 SLC12A5Q9H2X9 1139 aa12.08□□□□□ -0.48
CDH23-211ENST00000475158 FOXD4L6Q3SYB3 417 aaPredicted RBP12.08□□□□□ -0.48
CDH23-211ENST00000475158 FOXD4L3Q6VB84 417 aaPredicted RBP12.08□□□□□ -0.48
CDH23-211ENST00000475158 OSCARQ8IYS5 282 aa12.08□□□□□ -0.48
CDH23-211ENST00000475158 TULP1O00294 542 aaPredicted RBP12.08□□□□□ -0.48
CDH23-211ENST00000475158 MTHFSP49914 203 aa12.08□□□□□ -0.48
CDH23-211ENST00000475158 RIPK4P57078 832 aa12.08□□□□□ -0.48
CDH23-211ENST00000475158 ZRSR1Q15695 479 aaKnown RBP12.07□□□□□ -0.48
CDH23-211ENST00000475158 CENPQQ7L2Z9 268 aaPredicted RBP12.07□□□□□ -0.48
CDH23-211ENST00000475158 CCDC9Q9Y3X0 531 aaKnown RBP12.07□□□□□ -0.48
CDH23-211ENST00000475158 CALD1Q05682 793 aaKnown RBP12.07□□□□□ -0.48
CDH23-211ENST00000475158 ZKSCAN2Q63HK3 967 aa12.06□□□□□ -0.48
CDH23-211ENST00000475158 EID1Q9Y6B2 187 aa12.06□□□□□ -0.48
CDH23-211ENST00000475158 NUTM2GQ5VZR2 741 aa12.06□□□□□ -0.48
CDH23-211ENST00000475158 CHMP3Q9Y3E7 222 aa12.06□□□□□ -0.48
CDH23-211ENST00000475158 FAM161AQ3B820 660 aa12.06□□□□□ -0.48
CDH23-211ENST00000475158 SKAP1Q86WV1 359 aa12.06□□□□□ -0.48
CDH23-211ENST00000475158 GRIN2BQ13224 1484 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms