RNA–Protein interactions for RNA: ENST00000474926.5

PHTF1-209, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 2

Gene PHTF1, Length 4,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-209ENST00000474926 MYBBP1AQ9BQG0 1328 aaKnown RBP9.76□□□□□ -0.85
PHTF1-209ENST00000474926 CAMSAP2Q08AD1 1489 aa9.76□□□□□ -0.85
PHTF1-209ENST00000474926 ANKRD30BQ9BXX2 1392 aa9.75□□□□□ -0.85
PHTF1-209ENST00000474926 NCOA1Q15788 1441 aa9.75□□□□□ -0.85
PHTF1-209ENST00000474926 RAPGEF3O95398 923 aa9.75□□□□□ -0.85
PHTF1-209ENST00000474926 HDGFP51858 240 aaKnown RBP9.75□□□□□ -0.85
PHTF1-209ENST00000474926 RCAN3Q9UKA8 241 aa9.75□□□□□ -0.85
PHTF1-209ENST00000474926 C11orf95C9JLR9 678 aaPredicted RBP9.74□□□□□ -0.85
PHTF1-209ENST00000474926 U2AF1L5P0DN76 240 aaPredicted RBP9.74□□□□□ -0.85
PHTF1-209ENST00000474926 U2AF1Q01081 240 aaKnown RBP eCLIP9.74□□□□□ -0.85
PHTF1-209ENST00000474926 CFAP70Q5T0N1 1121 aa9.74□□□□□ -0.85
PHTF1-209ENST00000474926 CNTLNQ9NXG0 1405 aa9.74□□□□□ -0.85
PHTF1-209ENST00000474926 TMEM132EQ6IEE7 984 aa9.74□□□□□ -0.85
PHTF1-209ENST00000474926 NUP153P49790 1475 aaKnown RBP9.74□□□□□ -0.85
PHTF1-209ENST00000474926 CCDC184Q52MB2 194 aa9.73□□□□□ -0.85
PHTF1-209ENST00000474926 NUTM2FA1L443 756 aa9.73□□□□□ -0.85
PHTF1-209ENST00000474926 VGFO15240 615 aaPredicted RBP9.73□□□□□ -0.85
PHTF1-209ENST00000474926 LMOD2Q6P5Q4 547 aa9.73□□□□□ -0.85
PHTF1-209ENST00000474926 AKNAQ7Z591 1439 aa9.73□□□□□ -0.85
PHTF1-209ENST00000474926 HDGFL2Q7Z4V5 671 aaPredicted RBP9.73□□□□□ -0.85
PHTF1-209ENST00000474926 RGS3P49796 1198 aa9.72□□□□□ -0.85
PHTF1-209ENST00000474926 NBR1Q14596 966 aa9.72□□□□□ -0.85
PHTF1-209ENST00000474926 GPATCH8Q9UKJ3 1502 aaKnown RBP9.72□□□□□ -0.85
PHTF1-209ENST00000474926 ATP10BO94823 1461 aa9.71□□□□□ -0.85
PHTF1-209ENST00000474926 FTSJ3Q8IY81 847 aaKnown RBP9.71□□□□□ -0.85
PHTF1-209ENST00000474926 MAPKBP1O60336 1514 aa9.71□□□□□ -0.86
PHTF1-209ENST00000474926 ADAMTS12P58397 1594 aa9.71□□□□□ -0.86
PHTF1-209ENST00000474926 MINK1Q8N4C8 1332 aaPredicted RBP9.71□□□□□ -0.86
PHTF1-209ENST00000474926 CTTNBP2Q8WZ74 1663 aa9.71□□□□□ -0.86
PHTF1-209ENST00000474926 UPF2Q9HAU5 1272 aaKnown RBP9.7□□□□□ -0.86
PHTF1-209ENST00000474926 UGGT2Q9NYU1 1516 aa9.7□□□□□ -0.86
PHTF1-209ENST00000474926 ZBED9Q6R2W3 1325 aa9.7□□□□□ -0.86
PHTF1-209ENST00000474926 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.7□□□□□ -0.86
PHTF1-209ENST00000474926 CCDC141Q6ZP82 1450 aa9.7□□□□□ -0.86
PHTF1-209ENST00000474926 RBM19Q9Y4C8 960 aaKnown RBP9.69□□□□□ -0.86
PHTF1-209ENST00000474926 PLEKHH2Q8IVE3 1493 aa9.69□□□□□ -0.86
PHTF1-209ENST00000474926 RRP7AQ9Y3A4 280 aaKnown RBP9.69□□□□□ -0.86
PHTF1-209ENST00000474926 TSHZ2Q9NRE2 1034 aa9.69□□□□□ -0.86
PHTF1-209ENST00000474926 TERF2IPQ9NYB0 399 aa9.68□□□□□ -0.86
PHTF1-209ENST00000474926 GOLGA2Q08379 1002 aa9.68□□□□□ -0.86
PHTF1-209ENST00000474926 CENPJQ9HC77 1338 aaPredicted RBP9.67□□□□□ -0.86
PHTF1-209ENST00000474926 RAPGEF6Q8TEU7 1601 aa9.67□□□□□ -0.86
PHTF1-209ENST00000474926 PLIN1O60240 522 aa9.67□□□□□ -0.86
PHTF1-209ENST00000474926 ABCA5Q8WWZ7 1642 aa9.67□□□□□ -0.86
PHTF1-209ENST00000474926 KIF14Q15058 1648 aa9.67□□□□□ -0.86
PHTF1-209ENST00000474926 EIF4G3O43432 1585 aaKnown RBP9.66□□□□□ -0.86
PHTF1-209ENST00000474926 EVC2Q86UK5 1308 aa9.66□□□□□ -0.86
PHTF1-209ENST00000474926 DISP1Q96F81 1524 aa9.66□□□□□ -0.86
PHTF1-209ENST00000474926 APAF1O14727 1248 aa9.66□□□□□ -0.86
PHTF1-209ENST00000474926 ERICH6BQ5W0A0 696 aa9.65□□□□□ -0.86
PHTF1-209ENST00000474926 STAC3Q96MF2 364 aa9.65□□□□□ -0.86
PHTF1-209ENST00000474926 KIAA0556O60303 1618 aa9.65□□□□□ -0.86
PHTF1-209ENST00000474926 PDE3BQ13370 1112 aa9.65□□□□□ -0.86
PHTF1-209ENST00000474926 WDR62O43379 1518 aa9.65□□□□□ -0.86
PHTF1-209ENST00000474926 MYH16Q9H6N6 1097 aa9.65□□□□□ -0.86
PHTF1-209ENST00000474926 PAK3O75914 559 aaPredicted RBP9.64□□□□□ -0.87
PHTF1-209ENST00000474926 PNNQ9H307 717 aaKnown RBP9.64□□□□□ -0.87
PHTF1-209ENST00000474926 CABP2Q9NPB3 220 aa9.64□□□□□ -0.87
PHTF1-209ENST00000474926 EID1Q9Y6B2 187 aa9.64□□□□□ -0.87
PHTF1-209ENST00000474926 RPRD2Q5VT52 1461 aaKnown RBP9.64□□□□□ -0.87
PHTF1-209ENST00000474926 HSP90AA1P07900 732 aaKnown RBP9.64□□□□□ -0.87
PHTF1-209ENST00000474926 CFAP43Q8NDM7 1665 aa9.63□□□□□ -0.87
PHTF1-209ENST00000474926 CLUAP1Q96AJ1 413 aa9.63□□□□□ -0.87
PHTF1-209ENST00000474926 CGNL1Q0VF96 1302 aa9.63□□□□□ -0.87
PHTF1-209ENST00000474926 ADAMTS8Q9UP79 889 aa9.63□□□□□ -0.87
PHTF1-209ENST00000474926 TARBP1Q13395 1621 aaKnown RBP9.62□□□□□ -0.87
PHTF1-209ENST00000474926 EXOC6Q8TAG9 804 aa9.62□□□□□ -0.87
PHTF1-209ENST00000474926 SLC12A5Q9H2X9 1139 aa9.62□□□□□ -0.87
PHTF1-209ENST00000474926 CD109Q6YHK3 1445 aa9.62□□□□□ -0.87
PHTF1-209ENST00000474926 NUP160Q12769 1436 aa9.61□□□□□ -0.87
PHTF1-209ENST00000474926 CDCA7LQ96GN5 454 aa9.61□□□□□ -0.87
PHTF1-209ENST00000474926 A0A0G2JS52 829 aa9.61□□□□□ -0.87
PHTF1-209ENST00000474926 PNISRQ8TF01 805 aaKnown RBP9.61□□□□□ -0.87
PHTF1-209ENST00000474926 BCL2L13Q9BXK5 485 aa9.61□□□□□ -0.87
PHTF1-209ENST00000474926 NGDNQ8NEJ9 315 aaKnown RBP9.61□□□□□ -0.87
PHTF1-209ENST00000474926 GGNBP2Q9H3C7 697 aa9.61□□□□□ -0.87
PHTF1-209ENST00000474926 TCOF1Q13428 1488 aaKnown RBP9.6□□□□□ -0.87
PHTF1-209ENST00000474926 HAP1P54257 671 aaPredicted RBP9.6□□□□□ -0.87
PHTF1-209ENST00000474926 MAGI3Q5TCQ9 1506 aa9.6□□□□□ -0.87
PHTF1-209ENST00000474926 ADGRL1O94910 1474 aa9.6□□□□□ -0.87
PHTF1-209ENST00000474926 PBRM1Q86U86 1689 aa9.6□□□□□ -0.87
PHTF1-209ENST00000474926 RRP1P56182 461 aaKnown RBP9.6□□□□□ -0.87
PHTF1-209ENST00000474926 PPP2R1AP30153 589 aa9.59□□□□□ -0.87
PHTF1-209ENST00000474926 BRD4O60885 1362 aaPredicted RBP9.59□□□□□ -0.87
PHTF1-209ENST00000474926 SAMD9Q5K651 1589 aa9.59□□□□□ -0.87
PHTF1-209ENST00000474926 ERBINQ96RT1 1412 aa9.59□□□□□ -0.87
PHTF1-209ENST00000474926 FANCAO15360 1455 aa9.58□□□□□ -0.88
PHTF1-209ENST00000474926 MS4A1P11836 297 aa9.58□□□□□ -0.88
PHTF1-209ENST00000474926 PRAM1Q96QH2 718 aa9.58□□□□□ -0.88
PHTF1-209ENST00000474926 SMC4Q9NTJ3 1288 aa9.58□□□□□ -0.88
PHTF1-209ENST00000474926 MTHFSP49914 203 aa9.57□□□□□ -0.88
PHTF1-209ENST00000474926 CRBNQ96SW2 442 aa9.57□□□□□ -0.88
PHTF1-209ENST00000474926 ANP32EQ9BTT0 268 aa9.57□□□□□ -0.88
PHTF1-209ENST00000474926 ADGRF5Q8IZF2 1346 aa9.57□□□□□ -0.88
PHTF1-209ENST00000474926 PLCH2O75038 1416 aa9.57□□□□□ -0.88
PHTF1-209ENST00000474926 ELL2O00472 640 aaPredicted RBP9.57□□□□□ -0.88
PHTF1-209ENST00000474926 LTV1Q96GA3 475 aaPredicted RBP9.57□□□□□ -0.88
PHTF1-209ENST00000474926 ITPRIPQ8IWB1 547 aa9.56□□□□□ -0.88
PHTF1-209ENST00000474926 RTF1Q92541 710 aaKnown RBP9.56□□□□□ -0.88
PHTF1-209ENST00000474926 SYCP2Q9BX26 1530 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms