RNA–Protein interactions for RNA: ENST00000474612.1

NOTCH4-204, Transcript of notch 4, humanhuman

TSL 5

Gene NOTCH4, Length 5,267 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-204ENST00000474612 ST20-MTHFSA0A0A6YYL1 179 aa22.63■■□□□ 1.21
NOTCH4-204ENST00000474612 RUSC2Q8N2Y8 1516 aa22.61■■□□□ 1.21
NOTCH4-204ENST00000474612 C1orf141Q5JVX7 400 aa22.61■■□□□ 1.21
NOTCH4-204ENST00000474612 NRDCO43847 1150 aa22.61■■□□□ 1.21
NOTCH4-204ENST00000474612 GNL2Q13823 731 aaKnown RBP22.6■■□□□ 1.21
NOTCH4-204ENST00000474612 GRIN2BQ13224 1484 aa22.6■■□□□ 1.21
NOTCH4-204ENST00000474612 MINK1Q8N4C8 1332 aaPredicted RBP22.6■■□□□ 1.21
NOTCH4-204ENST00000474612 STAC3Q96MF2 364 aa22.59■■□□□ 1.21
NOTCH4-204ENST00000474612 KIF15Q9NS87 1388 aa22.59■■□□□ 1.21
NOTCH4-204ENST00000474612 PMFBP1Q8TBY8 1022 aa22.59■■□□□ 1.21
NOTCH4-204ENST00000474612 PDE3BQ13370 1112 aa22.58■■□□□ 1.21
NOTCH4-204ENST00000474612 SLC4A10Q6U841 1118 aa22.58■■□□□ 1.21
NOTCH4-204ENST00000474612 PLCB2Q00722 1185 aa22.58■■□□□ 1.2
NOTCH4-204ENST00000474612 PANK3Q9H999 370 aa22.57■■□□□ 1.2
NOTCH4-204ENST00000474612 CCDC146Q8IYE0 955 aa22.56■■□□□ 1.2
NOTCH4-204ENST00000474612 ERICH6BQ5W0A0 696 aa22.56■■□□□ 1.2
NOTCH4-204ENST00000474612 PSME1Q06323 249 aa22.56■■□□□ 1.2
NOTCH4-204ENST00000474612 CENPJQ9HC77 1338 aaPredicted RBP22.54■■□□□ 1.2
NOTCH4-204ENST00000474612 TEFQ10587 303 aa22.53■■□□□ 1.2
NOTCH4-204ENST00000474612 DNTTIP2Q5QJE6 756 aaKnown RBP22.52■■□□□ 1.2
NOTCH4-204ENST00000474612 MYBBP1AQ9BQG0 1328 aaKnown RBP22.52■■□□□ 1.2
NOTCH4-204ENST00000474612 ATF3P18847 181 aa22.51■■□□□ 1.19
NOTCH4-204ENST00000474612 GLIPR1L2Q4G1C9 344 aa22.51■■□□□ 1.19
NOTCH4-204ENST00000474612 MEX3CQ5U5Q3 659 aaKnown RBP22.5■■□□□ 1.19
NOTCH4-204ENST00000474612 FRAT2O75474 233 aaPredicted RBP22.5■■□□□ 1.19
NOTCH4-204ENST00000474612 TTC5Q8N0Z6 440 aa22.49■■□□□ 1.19
NOTCH4-204ENST00000474612 DHX57Q6P158 1386 aaKnown RBP22.48■■□□□ 1.19
NOTCH4-204ENST00000474612 CLSTN1O94985 981 aa22.48■■□□□ 1.19
NOTCH4-204ENST00000474612 CUX1P39880 1505 aa22.48■■□□□ 1.19
NOTCH4-204ENST00000474612 MRC2Q9UBG0 1479 aa22.48■■□□□ 1.19
NOTCH4-204ENST00000474612 TRIM6-TRIM34B2RNG4 842 aa22.46■■□□□ 1.19
NOTCH4-204ENST00000474612 NOP58Q9Y2X3 529 aaKnown RBP22.46■■□□□ 1.19
NOTCH4-204ENST00000474612 CLUAP1Q96AJ1 413 aa22.45■■□□□ 1.19
NOTCH4-204ENST00000474612 USP47Q96K76 1375 aa22.45■■□□□ 1.18
NOTCH4-204ENST00000474612 SYNJ2O15056 1496 aa22.45■■□□□ 1.18
NOTCH4-204ENST00000474612 HTATSF1O43719 755 aaKnown RBP22.45■■□□□ 1.18
NOTCH4-204ENST00000474612 PRG4Q92954 1404 aaPredicted RBP22.45■■□□□ 1.18
NOTCH4-204ENST00000474612 IFT140Q96RY7 1462 aa22.44■■□□□ 1.18
NOTCH4-204ENST00000474612 MSH5O43196 834 aa22.42■■□□□ 1.18
NOTCH4-204ENST00000474612 FGD6Q6ZV73 1430 aa22.42■■□□□ 1.18
NOTCH4-204ENST00000474612 ZNF644Q9H582 1327 aaPredicted RBP22.41■■□□□ 1.18
NOTCH4-204ENST00000474612 NEXNQ0ZGT2 675 aa22.41■■□□□ 1.18
NOTCH4-204ENST00000474612 RRP7AQ9Y3A4 280 aaKnown RBP22.41■■□□□ 1.18
NOTCH4-204ENST00000474612 DIAPH1O60610 1272 aaKnown RBP22.41■■□□□ 1.18
NOTCH4-204ENST00000474612 PRDM2Q13029 1718 aa22.4■■□□□ 1.18
NOTCH4-204ENST00000474612 CFTRP13569 1480 aa22.39■■□□□ 1.18
NOTCH4-204ENST00000474612 ANKRD50Q9ULJ7 1429 aa22.39■■□□□ 1.17
NOTCH4-204ENST00000474612 TCERG1O14776 1098 aaKnown RBP22.39■■□□□ 1.17
NOTCH4-204ENST00000474612 ARHGAP5Q13017 1502 aa22.38■■□□□ 1.17
NOTCH4-204ENST00000474612 AFAP1Q8N556 730 aa22.37■■□□□ 1.17
NOTCH4-204ENST00000474612 CCDC34Q96HJ3 373 aa22.37■■□□□ 1.17
NOTCH4-204ENST00000474612 CASKIN1Q8WXD9 1431 aa22.36■■□□□ 1.17
NOTCH4-204ENST00000474612 E9PSI1 815 aa22.36■■□□□ 1.17
NOTCH4-204ENST00000474612 NGEFQ8N5V2 710 aa22.36■■□□□ 1.17
NOTCH4-204ENST00000474612 ELL2O00472 640 aaPredicted RBP22.35■■□□□ 1.17
NOTCH4-204ENST00000474612 SPRYD3Q8NCJ5 442 aa22.35■■□□□ 1.17
NOTCH4-204ENST00000474612 FYCO1Q9BQS8 1478 aa22.35■■□□□ 1.17
NOTCH4-204ENST00000474612 RAPGEF4Q8WZA2 1011 aa22.35■■□□□ 1.17
NOTCH4-204ENST00000474612 HSP90B1P14625 803 aaKnown RBP22.35■■□□□ 1.17
NOTCH4-204ENST00000474612 MIA2Q96PC5 1412 aa22.34■■□□□ 1.17
NOTCH4-204ENST00000474612 PTMSP20962 102 aa22.34■■□□□ 1.17
NOTCH4-204ENST00000474612 SYTL4Q96C24 671 aaPredicted RBP22.34■■□□□ 1.17
NOTCH4-204ENST00000474612 TOMM22Q9NS69 142 aa22.34■■□□□ 1.17
NOTCH4-204ENST00000474612 GBP4Q96PP9 640 aa22.33■■□□□ 1.17
NOTCH4-204ENST00000474612 DDX58O95786 925 aaKnown RBP22.32■■□□□ 1.16
NOTCH4-204ENST00000474612 TXNDC2Q86VQ3 553 aa22.31■■□□□ 1.16
NOTCH4-204ENST00000474612 ZKSCAN2Q63HK3 967 aa22.31■■□□□ 1.16
NOTCH4-204ENST00000474612 LRRFIP1Q32MZ4 808 aaKnown RBP22.3■■□□□ 1.16
NOTCH4-204ENST00000474612 EIF2S2P20042 333 aaKnown RBP22.3■■□□□ 1.16
NOTCH4-204ENST00000474612 THEMISQ8N1K5 641 aaPredicted RBP22.3■■□□□ 1.16
NOTCH4-204ENST00000474612 MFAP1P55081 439 aaKnown RBP22.29■■□□□ 1.16
NOTCH4-204ENST00000474612 NESP48681 1621 aa22.29■■□□□ 1.16
NOTCH4-204ENST00000474612 L1TD1Q5T7N2 865 aaKnown RBP22.29■■□□□ 1.16
NOTCH4-204ENST00000474612 KIF3AQ9Y496 699 aa22.29■■□□□ 1.16
NOTCH4-204ENST00000474612 C9orf78Q9NZ63 289 aaPredicted RBP22.29■■□□□ 1.16
NOTCH4-204ENST00000474612 NCOA2Q15596 1464 aa22.28■■□□□ 1.16
NOTCH4-204ENST00000474612 GPRASP1Q5JY77 1395 aa22.28■■□□□ 1.16
NOTCH4-204ENST00000474612 DRC7Q8IY82 874 aa22.28■■□□□ 1.16
NOTCH4-204ENST00000474612 PRKRIP1Q9H875 184 aaPredicted RBP22.28■■□□□ 1.16
NOTCH4-204ENST00000474612 LRRC9Q6ZRR7 1453 aa22.28■■□□□ 1.16
NOTCH4-204ENST00000474612 PROSER2Q86WR7 435 aaPredicted RBP22.27■■□□□ 1.16
NOTCH4-204ENST00000474612 PLEKHH2Q8IVE3 1493 aa22.27■■□□□ 1.16
NOTCH4-204ENST00000474612 CC2D2AQ9P2K1 1620 aa22.27■■□□□ 1.16
NOTCH4-204ENST00000474612 NLRP2Q9NX02 1062 aa22.26■■□□□ 1.15
NOTCH4-204ENST00000474612 CHAF1AQ13111 956 aaPredicted RBP22.26■■□□□ 1.15
NOTCH4-204ENST00000474612 CHMP4CQ96CF2 233 aa22.25■■□□□ 1.15
NOTCH4-204ENST00000474612 NOL10Q9BSC4 688 aaKnown RBP22.25■■□□□ 1.15
NOTCH4-204ENST00000474612 RIPK4P57078 832 aa22.25■■□□□ 1.15
NOTCH4-204ENST00000474612 RRBP1Q9P2E9 1410 aaKnown RBP22.25■■□□□ 1.15
NOTCH4-204ENST00000474612 NLRP6P59044 892 aa22.25■■□□□ 1.15
NOTCH4-204ENST00000474612 APAF1O14727 1248 aa22.24■■□□□ 1.15
NOTCH4-204ENST00000474612 API5Q9BZZ5 524 aaKnown RBP22.24■■□□□ 1.15
NOTCH4-204ENST00000474612 SYAP1Q96A49 352 aaPredicted RBP22.23■■□□□ 1.15
NOTCH4-204ENST00000474612 RASSF8Q8NHQ8 419 aa22.22■■□□□ 1.15
NOTCH4-204ENST00000474612 CSPP1Q1MSJ5 1256 aa22.22■■□□□ 1.15
NOTCH4-204ENST00000474612 AMOTL1Q8IY63 956 aa22.22■■□□□ 1.15
NOTCH4-204ENST00000474612 HMGXB3Q12766 1538 aa22.22■■□□□ 1.15
NOTCH4-204ENST00000474612 TOPBP1Q92547 1522 aa22.21■■□□□ 1.15
NOTCH4-204ENST00000474612 KIAA2012Q0VF49 1180 aa22.21■■□□□ 1.15
NOTCH4-204ENST00000474612 TMEM132EQ6IEE7 984 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms