RNA–Protein interactions for RNA: ENST00000474226.1

UFD1-207, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 5

Gene UFD1, Length 293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-207ENST00000474226 MYT1LQ9UL68 1186 aa10.63□□□□□ -0.71
UFD1-207ENST00000474226 NBR1Q14596 966 aa10.62□□□□□ -0.71
UFD1-207ENST00000474226 GRXCR2A6NFK2 248 aa10.61□□□□□ -0.71
UFD1-207ENST00000474226 RBM33Q96EV2 1170 aaKnown RBP10.61□□□□□ -0.71
UFD1-207ENST00000474226 RNF166Q96A37 237 aaPredicted RBP10.59□□□□□ -0.71
UFD1-207ENST00000474226 VPS9D1Q9Y2B5 631 aa10.59□□□□□ -0.71
UFD1-207ENST00000474226 PPP1R3GB7ZBB8 358 aa10.58□□□□□ -0.72
UFD1-207ENST00000474226 C6orf132Q5T0Z8 1188 aa10.58□□□□□ -0.72
UFD1-207ENST00000474226 ZBED2Q9BTP6 218 aa10.58□□□□□ -0.72
UFD1-207ENST00000474226 SLC4A5Q9BY07 1137 aa10.58□□□□□ -0.72
UFD1-207ENST00000474226 MAP3K7O43318 606 aa10.57□□□□□ -0.72
UFD1-207ENST00000474226 EN1Q05925 392 aaPredicted RBP10.57□□□□□ -0.72
UFD1-207ENST00000474226 KDM2AQ9Y2K7 1162 aa10.57□□□□□ -0.72
UFD1-207ENST00000474226 HRO43593 1189 aa10.56□□□□□ -0.72
UFD1-207ENST00000474226 COL9A1P20849 921 aa10.56□□□□□ -0.72
UFD1-207ENST00000474226 STAC3Q96MF2 364 aa10.55□□□□□ -0.72
UFD1-207ENST00000474226 VSIG10Q8N0Z9 540 aa10.54□□□□□ -0.72
UFD1-207ENST00000474226 OSBPP22059 807 aa10.53□□□□□ -0.72
UFD1-207ENST00000474226 TSR1Q2NL82 804 aaKnown RBP10.53□□□□□ -0.72
UFD1-207ENST00000474226 PRIM1P49642 420 aaKnown RBP10.52□□□□□ -0.73
UFD1-207ENST00000474226 PROX2Q3B8N5 592 aa10.52□□□□□ -0.73
UFD1-207ENST00000474226 MLLT3P42568 568 aaPredicted RBP10.51□□□□□ -0.73
UFD1-207ENST00000474226 BHMG1C9JSJ3 638 aaPredicted RBP10.49□□□□□ -0.73
UFD1-207ENST00000474226 NBPF3Q9H094 633 aa10.48□□□□□ -0.73
UFD1-207ENST00000474226 SEMA3EO15041 775 aa10.47□□□□□ -0.73
UFD1-207ENST00000474226 MRPL50Q8N5N7 158 aaKnown RBP10.47□□□□□ -0.73
UFD1-207ENST00000474226 RABGEF1Q9UJ41 708 aa10.47□□□□□ -0.73
UFD1-207ENST00000474226 TRIM6-TRIM34B2RNG4 842 aa10.45□□□□□ -0.74
UFD1-207ENST00000474226 CERKQ8TCT0 537 aa10.45□□□□□ -0.74
UFD1-207ENST00000474226 CDHR5Q9HBB8 845 aa10.45□□□□□ -0.74
UFD1-207ENST00000474226 KIAA1468Q9P260 1216 aa10.45□□□□□ -0.74
UFD1-207ENST00000474226 GOLGA8CPA6NN73 597 aa10.44□□□□□ -0.74
UFD1-207ENST00000474226 ONECUT3O60422 494 aaPredicted RBP10.44□□□□□ -0.74
UFD1-207ENST00000474226 KCTD12Q96CX2 325 aaKnown RBP10.44□□□□□ -0.74
UFD1-207ENST00000474226 PRSS12P56730 875 aa10.41□□□□□ -0.74
UFD1-207ENST00000474226 CDCA7LQ96GN5 454 aa10.41□□□□□ -0.74
UFD1-207ENST00000474226 TSKSQ9UJT2 592 aa10.41□□□□□ -0.74
UFD1-207ENST00000474226 PACS2Q86VP3 889 aa10.4□□□□□ -0.74
UFD1-207ENST00000474226 TESPA1A2RU30 521 aaPredicted RBP10.39□□□□□ -0.75
UFD1-207ENST00000474226 WNT2BQ93097 391 aa10.39□□□□□ -0.75
UFD1-207ENST00000474226 HCSTQ9UBK5 93 aa10.39□□□□□ -0.75
UFD1-207ENST00000474226 LAPTM4BQ86VI4 370 aa10.38□□□□□ -0.75
UFD1-207ENST00000474226 SEPT9Q9UHD8 586 aaPredicted RBP10.38□□□□□ -0.75
UFD1-207ENST00000474226 SMYD5Q6GMV2 418 aa10.37□□□□□ -0.75
UFD1-207ENST00000474226 NPDC1Q9NQX5 325 aaPredicted RBP10.37□□□□□ -0.75
UFD1-207ENST00000474226 NUTM2FA1L443 756 aa10.36□□□□□ -0.75
UFD1-207ENST00000474226 RBM27Q9P2N5 1060 aaKnown RBP10.35□□□□□ -0.75
UFD1-207ENST00000474226 FAM198AQ9UFP1 575 aa10.35□□□□□ -0.75
UFD1-207ENST00000474226 PTPN5P54829 565 aa10.34□□□□□ -0.75
UFD1-207ENST00000474226 FAM98CQ17RN3 349 aaKnown RBP10.34□□□□□ -0.75
UFD1-207ENST00000474226 THSD4Q6ZMP0 1018 aa10.34□□□□□ -0.75
UFD1-207ENST00000474226 ANKK1Q8NFD2 765 aa10.34□□□□□ -0.75
UFD1-207ENST00000474226 ZFRQ96KR1 1074 aaKnown RBP10.34□□□□□ -0.75
UFD1-207ENST00000474226 NBPF26B4DH59 902 aa10.33□□□□□ -0.76
UFD1-207ENST00000474226 PTGDRQ13258 359 aa10.33□□□□□ -0.76
UFD1-207ENST00000474226 PADI6Q6TGC4 694 aa10.33□□□□□ -0.76
UFD1-207ENST00000474226 SMAPO00193 183 aa10.31□□□□□ -0.76
UFD1-207ENST00000474226 RBM26Q5T8P6 1007 aaKnown RBP10.31□□□□□ -0.76
UFD1-207ENST00000474226 TATDN2Q93075 761 aa10.31□□□□□ -0.76
UFD1-207ENST00000474226 PNMA3Q9UL41 463 aa10.31□□□□□ -0.76
UFD1-207ENST00000474226 NISCHQ9Y2I1 1504 aa10.3□□□□□ -0.76
UFD1-207ENST00000474226 NUDT18Q6ZVK8 323 aa10.3□□□□□ -0.76
UFD1-207ENST00000474226 TTC13Q8NBP0 860 aa10.3□□□□□ -0.76
UFD1-207ENST00000474226 C3orf80F5H4A9 247 aa10.29□□□□□ -0.76
UFD1-207ENST00000474226 BCAMP50895 628 aa10.29□□□□□ -0.76
UFD1-207ENST00000474226 SOWAHBA6NEL2 793 aa10.28□□□□□ -0.76
UFD1-207ENST00000474226 FCHSD2O94868 740 aa10.28□□□□□ -0.76
UFD1-207ENST00000474226 LRCH3Q96II8 777 aa10.27□□□□□ -0.77
UFD1-207ENST00000474226 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.26□□□□□ -0.77
UFD1-207ENST00000474226 TULP1O00294 542 aaPredicted RBP10.25□□□□□ -0.77
UFD1-207ENST00000474226 HIC1Q14526 733 aa10.23□□□□□ -0.77
UFD1-207ENST00000474226 SAMD7Q7Z3H4 446 aa10.23□□□□□ -0.77
UFD1-207ENST00000474226 HDGFP51858 240 aaKnown RBP10.21□□□□□ -0.77
UFD1-207ENST00000474226 GPIHBP1Q8IV16 184 aa10.21□□□□□ -0.77
UFD1-207ENST00000474226 EYA1Q99502 592 aa10.21□□□□□ -0.77
UFD1-207ENST00000474226 TSR3Q9UJK0 312 aaKnown RBP10.21□□□□□ -0.77
UFD1-207ENST00000474226 HPS5Q9UPZ3 1129 aa10.21□□□□□ -0.77
UFD1-207ENST00000474226 WBP1LQ9NX94 342 aa10.2□□□□□ -0.78
UFD1-207ENST00000474226 PLA2G2EQ9NZK7 142 aa10.2□□□□□ -0.78
UFD1-207ENST00000474226 ADGRG1Q9Y653 693 aa10.2□□□□□ -0.78
UFD1-207ENST00000474226 FAM161AQ3B820 660 aa10.19□□□□□ -0.78
UFD1-207ENST00000474226 RBM46Q8TBY0 533 aaKnown RBP10.19□□□□□ -0.78
UFD1-207ENST00000474226 GNPATO15228 680 aa10.18□□□□□ -0.78
UFD1-207ENST00000474226 GPR37O15354 613 aa10.18□□□□□ -0.78
UFD1-207ENST00000474226 NYAP1Q6ZVC0 841 aa10.18□□□□□ -0.78
UFD1-207ENST00000474226 RNF40O75150 1001 aa10.17□□□□□ -0.78
UFD1-207ENST00000474226 PPP4CP60510 307 aa10.17□□□□□ -0.78
UFD1-207ENST00000474226 FECHP22830 423 aa10.16□□□□□ -0.78
UFD1-207ENST00000474226 SWT1Q5T5J6 900 aaKnown RBP10.16□□□□□ -0.78
UFD1-207ENST00000474226 DNAJB2P25686 324 aa10.14□□□□□ -0.79
UFD1-207ENST00000474226 OATP04181 439 aa10.13□□□□□ -0.79
UFD1-207ENST00000474226 SLC4A3P48751 1232 aa10.13□□□□□ -0.79
UFD1-207ENST00000474226 SLF2Q8IX21 1173 aa10.13□□□□□ -0.79
UFD1-207ENST00000474226 RCCD1A6NED2 376 aa10.12□□□□□ -0.79
UFD1-207ENST00000474226 PXYLP1Q8TE99 480 aa10.12□□□□□ -0.79
UFD1-207ENST00000474226 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.11□□□□□ -0.79
UFD1-207ENST00000474226 TMEM134Q9H6X4 195 aa10.11□□□□□ -0.79
UFD1-207ENST00000474226 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.1□□□□□ -0.79
UFD1-207ENST00000474226 METTL3Q86U44 580 aaKnown RBP10.1□□□□□ -0.79
UFD1-207ENST00000474226 NECTIN2Q92692 538 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms