RNA–Protein interactions for RNA: ENST00000470951.5

SRGAP3-204, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 2,334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-204ENST00000470951 LRPPRCP42704 1394 aaKnown RBP15.1■□□□□ 0.01
SRGAP3-204ENST00000470951 CDK13Q14004 1512 aaKnown RBP15.09■□□□□ 0.01
SRGAP3-204ENST00000470951 ERCC6L2Q5T890 1561 aa15.09■□□□□ 0.01
SRGAP3-204ENST00000470951 PZPP20742 1482 aa15.08■□□□□ 0.01
SRGAP3-204ENST00000470951 ADGBQ8N7X0 1667 aa15.08■□□□□ 0
SRGAP3-204ENST00000470951 DNAJC5Q9H3Z4 198 aa15.08■□□□□ 0
SRGAP3-204ENST00000470951 BRD4O60885 1362 aaPredicted RBP15.08■□□□□ 0
SRGAP3-204ENST00000470951 MS4A1P11836 297 aa15.08■□□□□ 0
SRGAP3-204ENST00000470951 PRG4Q92954 1404 aaPredicted RBP15.07■□□□□ 0
SRGAP3-204ENST00000470951 KIF15Q9NS87 1388 aa15.07■□□□□ 0
SRGAP3-204ENST00000470951 TMC1Q8TDI8 760 aa15.06■□□□□ 0
SRGAP3-204ENST00000470951 SHROOM2Q13796 1616 aa15.06■□□□□ 0
SRGAP3-204ENST00000470951 UHRF1BP1Q6BDS2 1440 aa15.06■□□□□ 0
SRGAP3-204ENST00000470951 KIAA1107Q9UPP5 1409 aa15.06■□□□□ 0
SRGAP3-204ENST00000470951 RALGAPBQ86X10 1494 aa15.05■□□□□ -0
SRGAP3-204ENST00000470951 RRP1P56182 461 aaKnown RBP15.04■□□□□ -0
SRGAP3-204ENST00000470951 ARHGEF12Q9NZN5 1544 aa15.03■□□□□ -0
SRGAP3-204ENST00000470951 PPM1GO15355 546 aaPredicted RBP15.03■□□□□ -0
SRGAP3-204ENST00000470951 PDE3BQ13370 1112 aa15.03■□□□□ -0
SRGAP3-204ENST00000470951 RALBP1Q15311 655 aa15.03■□□□□ -0
SRGAP3-204ENST00000470951 GLIPR1L2Q4G1C9 344 aa15.03■□□□□ -0
SRGAP3-204ENST00000470951 E9PCH4 1651 aa15.03■□□□□ -0
SRGAP3-204ENST00000470951 DISP1Q96F81 1524 aa15.02■□□□□ -0
SRGAP3-204ENST00000470951 ITSN2Q9NZM3 1697 aa15.02□□□□□ -0.01
SRGAP3-204ENST00000470951 MYBBP1AQ9BQG0 1328 aaKnown RBP15.02□□□□□ -0.01
SRGAP3-204ENST00000470951 ADGRL2O95490 1459 aa15.02□□□□□ -0.01
SRGAP3-204ENST00000470951 RIMBP3CA6NJZ7 1639 aa15.01□□□□□ -0.01
SRGAP3-204ENST00000470951 RIMBP3BA6NNM3 1639 aa15.01□□□□□ -0.01
SRGAP3-204ENST00000470951 RIMBP3Q9UFD9 1639 aa15.01□□□□□ -0.01
SRGAP3-204ENST00000470951 CROCC2H7BZ55 1655 aa15□□□□□ -0.01
SRGAP3-204ENST00000470951 PDE4AP27815 886 aa15□□□□□ -0.01
SRGAP3-204ENST00000470951 BACH2Q9BYV9 841 aa15□□□□□ -0.01
SRGAP3-204ENST00000470951 ZMYM4Q5VZL5 1548 aa14.99□□□□□ -0.01
SRGAP3-204ENST00000470951 RCAN3Q9UKA8 241 aa14.99□□□□□ -0.01
SRGAP3-204ENST00000470951 INSRP06213 1382 aa14.99□□□□□ -0.01
SRGAP3-204ENST00000470951 ZMYND15Q9H091 742 aa14.98□□□□□ -0.01
SRGAP3-204ENST00000470951 WASHC2CQ9Y4E1 1318 aa14.98□□□□□ -0.01
SRGAP3-204ENST00000470951 CARMIL2Q6F5E8 1435 aa14.98□□□□□ -0.01
SRGAP3-204ENST00000470951 KIAA0556O60303 1618 aa14.97□□□□□ -0.01
SRGAP3-204ENST00000470951 DDRGK1Q96HY6 314 aa14.97□□□□□ -0.01
SRGAP3-204ENST00000470951 CYB5RLQ6IPT4 315 aa14.97□□□□□ -0.01
SRGAP3-204ENST00000470951 CAMSAP2Q08AD1 1489 aa14.96□□□□□ -0.01
SRGAP3-204ENST00000470951 NEFMP07197 916 aa14.96□□□□□ -0.01
SRGAP3-204ENST00000470951 EXOC6Q8TAG9 804 aa14.96□□□□□ -0.01
SRGAP3-204ENST00000470951 RAPGEF6Q8TEU7 1601 aa14.95□□□□□ -0.02
SRGAP3-204ENST00000470951 POLR3GLQ9BT43 218 aa14.95□□□□□ -0.02
SRGAP3-204ENST00000470951 NUP153P49790 1475 aaKnown RBP14.94□□□□□ -0.02
SRGAP3-204ENST00000470951 ADCY10Q96PN6 1610 aa14.93□□□□□ -0.02
SRGAP3-204ENST00000470951 ZNF644Q9H582 1327 aaPredicted RBP14.93□□□□□ -0.02
SRGAP3-204ENST00000470951 NLRP13Q86W25 1043 aa14.93□□□□□ -0.02
SRGAP3-204ENST00000470951 ANKRD30AQ9BXX3 1397 aa14.92□□□□□ -0.02
SRGAP3-204ENST00000470951 CARD11Q9BXL7 1154 aa14.92□□□□□ -0.02
SRGAP3-204ENST00000470951 KDM5DQ9BY66 1539 aa14.92□□□□□ -0.02
SRGAP3-204ENST00000470951 PTPRGP23470 1445 aa14.92□□□□□ -0.02
SRGAP3-204ENST00000470951 PKD2Q13563 968 aa14.92□□□□□ -0.02
SRGAP3-204ENST00000470951 RSPH6AQ9H0K4 717 aa14.92□□□□□ -0.02
SRGAP3-204ENST00000470951 PARD3Q8TEW0 1356 aa14.91□□□□□ -0.02
SRGAP3-204ENST00000470951 TROQ12816 1431 aaPredicted RBP14.91□□□□□ -0.02
SRGAP3-204ENST00000470951 PLEKHH2Q8IVE3 1493 aa14.91□□□□□ -0.02
SRGAP3-204ENST00000470951 ZNF326Q5BKZ1 582 aaKnown RBP14.91□□□□□ -0.02
SRGAP3-204ENST00000470951 FGD1P98174 961 aa14.89□□□□□ -0.03
SRGAP3-204ENST00000470951 PDE4CQ08493 712 aa14.89□□□□□ -0.03
SRGAP3-204ENST00000470951 CNGB1Q14028 1251 aaPredicted RBP14.89□□□□□ -0.03
SRGAP3-204ENST00000470951 LAS1LQ9Y4W2 734 aaKnown RBP14.89□□□□□ -0.03
SRGAP3-204ENST00000470951 ANKRD50Q9ULJ7 1429 aa14.89□□□□□ -0.03
SRGAP3-204ENST00000470951 SHANK2Q9UPX8 1470 aa14.88□□□□□ -0.03
SRGAP3-204ENST00000470951 GPATCH8Q9UKJ3 1502 aaKnown RBP14.88□□□□□ -0.03
SRGAP3-204ENST00000470951 CFDP1Q9UEE9 299 aaPredicted RBP14.87□□□□□ -0.03
SRGAP3-204ENST00000470951 ARID3CA6NKF2 412 aa14.87□□□□□ -0.03
SRGAP3-204ENST00000470951 BLMP54132 1417 aaPredicted RBP14.86□□□□□ -0.03
SRGAP3-204ENST00000470951 ST20-MTHFSA0A0A6YYL1 179 aa14.86□□□□□ -0.03
SRGAP3-204ENST00000470951 PLB1Q6P1J6 1458 aa14.86□□□□□ -0.03
SRGAP3-204ENST00000470951 PDIA4P13667 645 aaKnown RBP14.84□□□□□ -0.03
SRGAP3-204ENST00000470951 GSE1Q14687 1217 aa14.84□□□□□ -0.03
SRGAP3-204ENST00000470951 LAMC1P11047 1609 aa14.84□□□□□ -0.03
SRGAP3-204ENST00000470951 AAMPQ13685 434 aa14.83□□□□□ -0.04
SRGAP3-204ENST00000470951 TRPM1Q7Z4N2 1603 aa14.83□□□□□ -0.04
SRGAP3-204ENST00000470951 NUP155O75694 1391 aa14.82□□□□□ -0.04
SRGAP3-204ENST00000470951 CDC42BPAQ5VT25 1732 aa14.81□□□□□ -0.04
SRGAP3-204ENST00000470951 SENP3-EIF4A1A0A087X0R7 540 aa14.8□□□□□ -0.04
SRGAP3-204ENST00000470951 PER1O15534 1290 aaPredicted RBP14.8□□□□□ -0.04
SRGAP3-204ENST00000470951 NPM3O75607 178 aaKnown RBP14.8□□□□□ -0.04
SRGAP3-204ENST00000470951 KDM2BQ8NHM5 1336 aa14.79□□□□□ -0.04
SRGAP3-204ENST00000470951 NFKBIBQ15653 356 aa14.78□□□□□ -0.04
SRGAP3-204ENST00000470951 CENPQQ7L2Z9 268 aaPredicted RBP14.78□□□□□ -0.04
SRGAP3-204ENST00000470951 ABCA8O94911 1581 aa14.78□□□□□ -0.04
SRGAP3-204ENST00000470951 GPRASP1Q5JY77 1395 aa14.78□□□□□ -0.04
SRGAP3-204ENST00000470951 COL17A1Q9UMD9 1497 aaPredicted RBP14.78□□□□□ -0.04
SRGAP3-204ENST00000470951 CRBNQ96SW2 442 aa14.78□□□□□ -0.04
SRGAP3-204ENST00000470951 C9orf84Q5VXU9 1444 aa14.78□□□□□ -0.04
SRGAP3-204ENST00000470951 CDCA7LQ96GN5 454 aa14.77□□□□□ -0.04
SRGAP3-204ENST00000470951 PRAG1Q86YV5 1406 aa14.77□□□□□ -0.05
SRGAP3-204ENST00000470951 DCAF11Q8TEB1 546 aa14.77□□□□□ -0.05
SRGAP3-204ENST00000470951 ABCC2Q92887 1545 aa14.76□□□□□ -0.05
SRGAP3-204ENST00000470951 ARHGEF5Q12774 1597 aa14.75□□□□□ -0.05
SRGAP3-204ENST00000470951 RBM10P98175 930 aaKnown RBP14.75□□□□□ -0.05
SRGAP3-204ENST00000470951 FAM161AQ3B820 660 aa14.75□□□□□ -0.05
SRGAP3-204ENST00000470951 PRDM15P57071 1507 aaPredicted RBP14.75□□□□□ -0.05
SRGAP3-204ENST00000470951 EIF2AK4Q9P2K8 1649 aaKnown RBP14.74□□□□□ -0.05
SRGAP3-204ENST00000470951 PLIN1O60240 522 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms