RNA–Protein interactions for RNA: ENST00000470470.1

CHD6-206, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 5

Gene CHD6, Length 1,349 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-206ENST00000470470 UPF1Q92900 1129 aaKnown RBP eCLIP10.13□□□□□ -0.79
CHD6-206ENST00000470470 ATAD2BQ9ULI0 1458 aa10.13□□□□□ -0.79
CHD6-206ENST00000470470 THSD4Q6ZMP0 1018 aa10.12□□□□□ -0.79
CHD6-206ENST00000470470 FOSBP53539 338 aa10.11□□□□□ -0.79
CHD6-206ENST00000470470 NKX1-1Q15270 411 aaPredicted RBP10.11□□□□□ -0.79
CHD6-206ENST00000470470 PTPREP23469 700 aa10.1□□□□□ -0.79
CHD6-206ENST00000470470 PLCB2Q00722 1185 aa10.1□□□□□ -0.79
CHD6-206ENST00000470470 JPH4Q96JJ6 628 aa10.1□□□□□ -0.79
CHD6-206ENST00000470470 BHMG1C9JSJ3 638 aaPredicted RBP10.09□□□□□ -0.79
CHD6-206ENST00000470470 HRCP23327 699 aa10.09□□□□□ -0.79
CHD6-206ENST00000470470 ANO8Q9HCE9 1232 aaPredicted RBP10.08□□□□□ -0.8
CHD6-206ENST00000470470 EEA1Q15075 1411 aa10.08□□□□□ -0.8
CHD6-206ENST00000470470 PDE4AP27815 886 aa10.07□□□□□ -0.8
CHD6-206ENST00000470470 TRIM26Q12899 539 aaPredicted RBP10.07□□□□□ -0.8
CHD6-206ENST00000470470 ZBED2Q9BTP6 218 aa10.07□□□□□ -0.8
CHD6-206ENST00000470470 PCGF6Q9BYE7 350 aa10.07□□□□□ -0.8
CHD6-206ENST00000470470 ABCC8Q09428 1581 aa10.06□□□□□ -0.8
CHD6-206ENST00000470470 BAZ1BQ9UIG0 1483 aaKnown RBP10.06□□□□□ -0.8
CHD6-206ENST00000470470 NCKAP5LQ9HCH0 1330 aa10.06□□□□□ -0.8
CHD6-206ENST00000470470 GOLGA8CPA6NN73 597 aa10.05□□□□□ -0.8
CHD6-206ENST00000470470 Q6ZNB5 142 aa10.05□□□□□ -0.8
CHD6-206ENST00000470470 MRPL50Q8N5N7 158 aaKnown RBP10.05□□□□□ -0.8
CHD6-206ENST00000470470 WNT2BQ93097 391 aa10.05□□□□□ -0.8
CHD6-206ENST00000470470 NBPF3Q9H094 633 aa10.05□□□□□ -0.8
CHD6-206ENST00000470470 EVI5O60447 810 aa10.04□□□□□ -0.8
CHD6-206ENST00000470470 ZDHHC16Q969W1 377 aa10.04□□□□□ -0.8
CHD6-206ENST00000470470 HMGXB3Q12766 1538 aa10.03□□□□□ -0.8
CHD6-206ENST00000470470 NCAPD3P42695 1498 aa10.03□□□□□ -0.8
CHD6-206ENST00000470470 PAXIP1Q6ZW49 1069 aaPredicted RBP10.02□□□□□ -0.81
CHD6-206ENST00000470470 FAM9AQ8IZU1 332 aaPredicted RBP10.02□□□□□ -0.81
CHD6-206ENST00000470470 SPRYD3Q8NCJ5 442 aa10.02□□□□□ -0.81
CHD6-206ENST00000470470 CFAP44Q96MT7 982 aa10.02□□□□□ -0.81
CHD6-206ENST00000470470 ADAM33Q9BZ11 813 aa10.01□□□□□ -0.81
CHD6-206ENST00000470470 HAP1P54257 671 aaPredicted RBP10□□□□□ -0.81
CHD6-206ENST00000470470 DDX27Q96GQ7 796 aaKnown RBP10□□□□□ -0.81
CHD6-206ENST00000470470 WRNQ14191 1432 aaPredicted RBP eCLIP10□□□□□ -0.81
CHD6-206ENST00000470470 ITGBL1O95965 494 aaPredicted RBP9.99□□□□□ -0.81
CHD6-206ENST00000470470 PPP1R3GB7ZBB8 358 aa9.98□□□□□ -0.81
CHD6-206ENST00000470470 MFSD10Q14728 455 aa9.98□□□□□ -0.81
CHD6-206ENST00000470470 MAP3K9P80192 1104 aa9.96□□□□□ -0.82
CHD6-206ENST00000470470 LARP6Q9BRS8 491 aaKnown RBP9.96□□□□□ -0.82
CHD6-206ENST00000470470 TNIKQ9UKE5 1360 aa9.96□□□□□ -0.82
CHD6-206ENST00000470470 GTPBP6O43824 516 aaPredicted RBP9.95□□□□□ -0.82
CHD6-206ENST00000470470 RABGEF1Q9UJ41 708 aa9.95□□□□□ -0.82
CHD6-206ENST00000470470 SOGA1O94964 1423 aa9.94□□□□□ -0.82
CHD6-206ENST00000470470 SYNJ1O43426 1573 aa9.94□□□□□ -0.82
CHD6-206ENST00000470470 LAPTM4AQ15012 233 aa9.92□□□□□ -0.82
CHD6-206ENST00000470470 ANKK1Q8NFD2 765 aa9.92□□□□□ -0.82
CHD6-206ENST00000470470 FBXW7Q969H0 707 aa9.92□□□□□ -0.82
CHD6-206ENST00000470470 PCDHGA10Q9Y5H3 936 aa9.92□□□□□ -0.82
CHD6-206ENST00000470470 KIF21BO75037 1637 aa9.92□□□□□ -0.82
CHD6-206ENST00000470470 BIVM-ERCC5R4GMW8 1640 aa9.92□□□□□ -0.82
CHD6-206ENST00000470470 TOP2BQ02880 1626 aa9.91□□□□□ -0.82
CHD6-206ENST00000470470 LAPTM4BQ86VI4 370 aa9.9□□□□□ -0.82
CHD6-206ENST00000470470 EMILIN3Q9NT22 766 aa9.9□□□□□ -0.82
CHD6-206ENST00000470470 PRDM2Q13029 1718 aa9.9□□□□□ -0.82
CHD6-206ENST00000470470 GOLGA3Q08378 1498 aa9.9□□□□□ -0.82
CHD6-206ENST00000470470 RUSC2Q8N2Y8 1516 aa9.9□□□□□ -0.83
CHD6-206ENST00000470470 PHF14O94880 888 aa9.89□□□□□ -0.83
CHD6-206ENST00000470470 TYW1BQ6NUM6 668 aa9.89□□□□□ -0.83
CHD6-206ENST00000470470 NYAP1Q6ZVC0 841 aa9.89□□□□□ -0.83
CHD6-206ENST00000470470 CEP164Q9UPV0 1460 aa9.87□□□□□ -0.83
CHD6-206ENST00000470470 ONECUT3O60422 494 aaPredicted RBP9.87□□□□□ -0.83
CHD6-206ENST00000470470 ZEB1P37275 1124 aaPredicted RBP9.87□□□□□ -0.83
CHD6-206ENST00000470470 PROX2Q3B8N5 592 aa9.87□□□□□ -0.83
CHD6-206ENST00000470470 CEP162Q5TB80 1403 aa9.87□□□□□ -0.83
CHD6-206ENST00000470470 CFTRP13569 1480 aa9.87□□□□□ -0.83
CHD6-206ENST00000470470 SOWAHBA6NEL2 793 aa9.86□□□□□ -0.83
CHD6-206ENST00000470470 COL9A1P20849 921 aa9.86□□□□□ -0.83
CHD6-206ENST00000470470 LCE2BO14633 110 aa9.85□□□□□ -0.83
CHD6-206ENST00000470470 TRAF7Q6Q0C0 670 aa9.84□□□□□ -0.83
CHD6-206ENST00000470470 EPAS1Q99814 870 aa9.84□□□□□ -0.83
CHD6-206ENST00000470470 BCAMP50895 628 aa9.82□□□□□ -0.84
CHD6-206ENST00000470470 KCNC4Q03721 635 aa9.82□□□□□ -0.84
CHD6-206ENST00000470470 VSIG10Q8N0Z9 540 aa9.82□□□□□ -0.84
CHD6-206ENST00000470470 ZFRQ96KR1 1074 aaKnown RBP9.82□□□□□ -0.84
CHD6-206ENST00000470470 CAMK2BQ13554 666 aa9.81□□□□□ -0.84
CHD6-206ENST00000470470 KIAA1468Q9P260 1216 aa9.81□□□□□ -0.84
CHD6-206ENST00000470470 CUX1P39880 1505 aa9.79□□□□□ -0.84
CHD6-206ENST00000470470 ERICH3Q5RHP9 1530 aa9.79□□□□□ -0.84
CHD6-206ENST00000470470 GFRA3O60609 400 aa9.79□□□□□ -0.84
CHD6-206ENST00000470470 C6orf132Q5T0Z8 1188 aa9.79□□□□□ -0.84
CHD6-206ENST00000470470 TRIM6-TRIM34B2RNG4 842 aa9.78□□□□□ -0.84
CHD6-206ENST00000470470 UBTFP17480 764 aaKnown RBP9.78□□□□□ -0.84
CHD6-206ENST00000470470 FAM98CQ17RN3 349 aaKnown RBP9.78□□□□□ -0.84
CHD6-206ENST00000470470 CADPS2Q86UW7 1296 aa9.77□□□□□ -0.85
CHD6-206ENST00000470470 TSHZ2Q9NRE2 1034 aa9.77□□□□□ -0.85
CHD6-206ENST00000470470 WBP1LQ9NX94 342 aa9.77□□□□□ -0.85
CHD6-206ENST00000470470 PRXQ9BXM0 1461 aa9.77□□□□□ -0.85
CHD6-206ENST00000470470 CC2D2AQ9P2K1 1620 aa9.76□□□□□ -0.85
CHD6-206ENST00000470470 CADPSQ9ULU8 1353 aa9.76□□□□□ -0.85
CHD6-206ENST00000470470 SEPT9Q9UHD8 586 aaPredicted RBP9.75□□□□□ -0.85
CHD6-206ENST00000470470 DPYSL4O14531 572 aa9.74□□□□□ -0.85
CHD6-206ENST00000470470 LRCH3Q96II8 777 aa9.74□□□□□ -0.85
CHD6-206ENST00000470470 TSR3Q9UJK0 312 aaKnown RBP9.74□□□□□ -0.85
CHD6-206ENST00000470470 RAPGEF2Q9Y4G8 1499 aa9.73□□□□□ -0.85
CHD6-206ENST00000470470 CLIP1P30622 1438 aa9.73□□□□□ -0.85
CHD6-206ENST00000470470 KIF27Q86VH2 1401 aa9.73□□□□□ -0.85
CHD6-206ENST00000470470 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.73□□□□□ -0.85
CHD6-206ENST00000470470 NRG2O14511 850 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms