RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 HDGFL2Q7Z4V5 671 aaPredicted RBP7.74□□□□□ -1.17
CCDC144A-212ENST00000470068 ERICH3Q5RHP9 1530 aa7.74□□□□□ -1.17
CCDC144A-212ENST00000470068 POLD1P28340 1107 aa7.74□□□□□ -1.17
CCDC144A-212ENST00000470068 G3V3G9 751 aa7.74□□□□□ -1.17
CCDC144A-212ENST00000470068 HMMRO75330 724 aa7.74□□□□□ -1.17
CCDC144A-212ENST00000470068 DCAF8Q5TAQ9 597 aa7.74□□□□□ -1.17
CCDC144A-212ENST00000470068 HSCBQ8IWL3 235 aa7.74□□□□□ -1.17
CCDC144A-212ENST00000470068 FAM9BQ8IZU0 186 aa7.74□□□□□ -1.17
CCDC144A-212ENST00000470068 PLEKHH2Q8IVE3 1493 aa7.74□□□□□ -1.17
CCDC144A-212ENST00000470068 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.73□□□□□ -1.17
CCDC144A-212ENST00000470068 SKOR2Q2VWA4 1001 aaPredicted RBP7.73□□□□□ -1.17
CCDC144A-212ENST00000470068 AIDAQ96BJ3 306 aa7.73□□□□□ -1.17
CCDC144A-212ENST00000470068 EFCAB5A4FU69 1503 aa7.72□□□□□ -1.17
CCDC144A-212ENST00000470068 SPAG9O60271 1321 aaKnown RBP7.72□□□□□ -1.17
CCDC144A-212ENST00000470068 GPATCH3Q96I76 525 aa7.72□□□□□ -1.17
CCDC144A-212ENST00000470068 ROCK1Q13464 1354 aa7.71□□□□□ -1.17
CCDC144A-212ENST00000470068 NINLQ9Y2I6 1382 aa7.71□□□□□ -1.17
CCDC144A-212ENST00000470068 CCDC88BA6NC98 1476 aa7.71□□□□□ -1.18
CCDC144A-212ENST00000470068 NGDNQ8NEJ9 315 aaKnown RBP7.7□□□□□ -1.18
CCDC144A-212ENST00000470068 KIF15Q9NS87 1388 aa7.7□□□□□ -1.18
CCDC144A-212ENST00000470068 PTMAP06454 111 aaKnown RBP7.7□□□□□ -1.18
CCDC144A-212ENST00000470068 SRPK2P78362 688 aaKnown RBP7.7□□□□□ -1.18
CCDC144A-212ENST00000470068 TERF2IPQ9NYB0 399 aa7.7□□□□□ -1.18
CCDC144A-212ENST00000470068 ZNF526Q8TF50 670 aaPredicted RBP7.7□□□□□ -1.18
CCDC144A-212ENST00000470068 CHIC2Q9UKJ5 165 aa7.7□□□□□ -1.18
CCDC144A-212ENST00000470068 NOP58Q9Y2X3 529 aaKnown RBP7.7□□□□□ -1.18
CCDC144A-212ENST00000470068 ATP6V1DQ9Y5K8 247 aa7.7□□□□□ -1.18
CCDC144A-212ENST00000470068 CNTLNQ9NXG0 1405 aa7.7□□□□□ -1.18
CCDC144A-212ENST00000470068 NCBP3Q53F19 620 aaKnown RBP7.69□□□□□ -1.18
CCDC144A-212ENST00000470068 ISY1Q9ULR0 285 aaKnown RBP7.69□□□□□ -1.18
CCDC144A-212ENST00000470068 SMARCA4P51532 1647 aa7.69□□□□□ -1.18
CCDC144A-212ENST00000470068 PRG4Q92954 1404 aaPredicted RBP7.69□□□□□ -1.18
CCDC144A-212ENST00000470068 STRN4Q9NRL3 753 aa7.68□□□□□ -1.18
CCDC144A-212ENST00000470068 NLRP13Q86W25 1043 aa7.68□□□□□ -1.18
CCDC144A-212ENST00000470068 KIAA2012Q0VF49 1180 aa7.68□□□□□ -1.18
CCDC144A-212ENST00000470068 ZNF330Q9Y3S2 320 aaPredicted RBP7.68□□□□□ -1.18
CCDC144A-212ENST00000470068 PSME1Q06323 249 aa7.68□□□□□ -1.18
CCDC144A-212ENST00000470068 GOLGA6L1Q8N7Z2 621 aa7.68□□□□□ -1.18
CCDC144A-212ENST00000470068 STK26Q9P289 416 aa7.68□□□□□ -1.18
CCDC144A-212ENST00000470068 CCDC7Q96M83 1385 aa7.67□□□□□ -1.18
CCDC144A-212ENST00000470068 GOLGA6L4A6NEF3 574 aa7.67□□□□□ -1.18
CCDC144A-212ENST00000470068 GTF2E1P29083 439 aaPredicted RBP7.67□□□□□ -1.18
CCDC144A-212ENST00000470068 MYOM3Q5VTT5 1437 aa7.67□□□□□ -1.18
CCDC144A-212ENST00000470068 KIF21BO75037 1637 aa7.67□□□□□ -1.18
CCDC144A-212ENST00000470068 GAPVD1Q14C86 1478 aa7.67□□□□□ -1.18
CCDC144A-212ENST00000470068 NCAPD3P42695 1498 aa7.67□□□□□ -1.18
CCDC144A-212ENST00000470068 DDX11L8A8MPP1 907 aa7.66□□□□□ -1.18
CCDC144A-212ENST00000470068 HSP90AB1P08238 724 aaKnown RBP7.66□□□□□ -1.18
CCDC144A-212ENST00000470068 IFT140Q96RY7 1462 aa7.66□□□□□ -1.18
CCDC144A-212ENST00000470068 MTERF4Q7Z6M4 381 aaKnown RBP7.66□□□□□ -1.18
CCDC144A-212ENST00000470068 TPM3P06753 285 aa7.66□□□□□ -1.18
CCDC144A-212ENST00000470068 CGNL1Q0VF96 1302 aa7.66□□□□□ -1.18
CCDC144A-212ENST00000470068 ATAD2BQ9ULI0 1458 aa7.66□□□□□ -1.18
CCDC144A-212ENST00000470068 KIAA1211Q6ZU35 1233 aa7.65□□□□□ -1.18
CCDC144A-212ENST00000470068 MSNP26038 577 aaKnown RBP7.65□□□□□ -1.18
CCDC144A-212ENST00000470068 CT47B1P0C2W7 299 aaPredicted RBP7.65□□□□□ -1.18
CCDC144A-212ENST00000470068 SYNJ2O15056 1496 aa7.65□□□□□ -1.18
CCDC144A-212ENST00000470068 HFM1A2PYH4 1435 aa7.65□□□□□ -1.19
CCDC144A-212ENST00000470068 MAP3K1Q13233 1512 aa7.65□□□□□ -1.19
CCDC144A-212ENST00000470068 A0A0U1RQG5 324 aaPredicted RBP7.65□□□□□ -1.19
CCDC144A-212ENST00000470068 SAFB2Q14151 953 aaKnown RBP eCLIP7.65□□□□□ -1.19
CCDC144A-212ENST00000470068 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.65□□□□□ -1.19
CCDC144A-212ENST00000470068 CLEC11AQ9Y240 323 aa7.65□□□□□ -1.19
CCDC144A-212ENST00000470068 HSP90B1P14625 803 aaKnown RBP7.65□□□□□ -1.19
CCDC144A-212ENST00000470068 CCDC144AA2RUR9 1427 aa7.64□□□□□ -1.19
CCDC144A-212ENST00000470068 RTF1Q92541 710 aaKnown RBP7.64□□□□□ -1.19
CCDC144A-212ENST00000470068 AKNAQ7Z591 1439 aa7.64□□□□□ -1.19
CCDC144A-212ENST00000470068 KIF16BQ96L93 1317 aa7.64□□□□□ -1.19
CCDC144A-212ENST00000470068 FYCO1Q9BQS8 1478 aa7.64□□□□□ -1.19
CCDC144A-212ENST00000470068 PKNOX2Q96KN3 472 aa7.64□□□□□ -1.19
CCDC144A-212ENST00000470068 QTRT2Q9H974 415 aaKnown RBP7.64□□□□□ -1.19
CCDC144A-212ENST00000470068 NCKAP5LQ9HCH0 1330 aa7.63□□□□□ -1.19
CCDC144A-212ENST00000470068 DAPK1P53355 1430 aa7.63□□□□□ -1.19
CCDC144A-212ENST00000470068 HMGXB3Q12766 1538 aa7.63□□□□□ -1.19
CCDC144A-212ENST00000470068 MORC1Q86VD1 984 aa7.63□□□□□ -1.19
CCDC144A-212ENST00000470068 MIER1Q8N108 512 aa7.63□□□□□ -1.19
CCDC144A-212ENST00000470068 MROH2BQ7Z745 1585 aa7.62□□□□□ -1.19
CCDC144A-212ENST00000470068 HSPA1LP34931 641 aa7.62□□□□□ -1.19
CCDC144A-212ENST00000470068 CENPQQ7L2Z9 268 aaPredicted RBP7.62□□□□□ -1.19
CCDC144A-212ENST00000470068 SMC4Q9NTJ3 1288 aa7.62□□□□□ -1.19
CCDC144A-212ENST00000470068 PODXL2Q9NZ53 605 aa7.62□□□□□ -1.19
CCDC144A-212ENST00000470068 MYBBP1AQ9BQG0 1328 aaKnown RBP7.62□□□□□ -1.19
CCDC144A-212ENST00000470068 TEX14Q8IWB6 1497 aa7.62□□□□□ -1.19
CCDC144A-212ENST00000470068 HSP90AB4PQ58FF6 505 aa7.62□□□□□ -1.19
CCDC144A-212ENST00000470068 PKD2Q13563 968 aa7.61□□□□□ -1.19
CCDC144A-212ENST00000470068 ESCO1Q5FWF5 840 aa7.61□□□□□ -1.19
CCDC144A-212ENST00000470068 RRP7BPQ9NSQ0 103 aa7.61□□□□□ -1.19
CCDC144A-212ENST00000470068 WDHD1O75717 1129 aaPredicted RBP7.61□□□□□ -1.19
CCDC144A-212ENST00000470068 ZNF428Q96B54 188 aa7.61□□□□□ -1.19
CCDC144A-212ENST00000470068 MAP7D2Q96T17 732 aa7.61□□□□□ -1.19
CCDC144A-212ENST00000470068 LAS1LQ9Y4W2 734 aaKnown RBP7.61□□□□□ -1.19
CCDC144A-212ENST00000470068 STK32BQ9NY57 414 aa7.61□□□□□ -1.19
CCDC144A-212ENST00000470068 UHRF1BP1Q6BDS2 1440 aa7.61□□□□□ -1.19
CCDC144A-212ENST00000470068 VGFO15240 615 aaPredicted RBP7.61□□□□□ -1.19
CCDC144A-212ENST00000470068 MSH6P52701 1360 aa7.6□□□□□ -1.19
CCDC144A-212ENST00000470068 ST18O60284 1047 aa7.6□□□□□ -1.19
CCDC144A-212ENST00000470068 STK31Q9BXU1 1019 aa7.6□□□□□ -1.19
CCDC144A-212ENST00000470068 E9PSI1 815 aa7.6□□□□□ -1.19
CCDC144A-212ENST00000470068 GPS2Q13227 327 aa7.6□□□□□ -1.19
CCDC144A-212ENST00000470068 NEUROD2Q15784 382 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms