RNA–Protein interactions for RNA: ENST00000468284.1

CKAP2-205, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 3

Gene CKAP2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-205ENST00000468284 ERCC6L2Q5T890 1561 aa16.96■□□□□ 0.31
CKAP2-205ENST00000468284 MAGI1Q96QZ7 1491 aaPredicted RBP16.93■□□□□ 0.3
CKAP2-205ENST00000468284 DSG2Q14126 1118 aa16.93■□□□□ 0.3
CKAP2-205ENST00000468284 PTCD2Q8WV60 388 aaKnown RBP16.92■□□□□ 0.3
CKAP2-205ENST00000468284 SYNJ2O15056 1496 aa16.92■□□□□ 0.3
CKAP2-205ENST00000468284 FGD5Q6ZNL6 1462 aa16.9■□□□□ 0.3
CKAP2-205ENST00000468284 GRIN2BQ13224 1484 aa16.89■□□□□ 0.29
CKAP2-205ENST00000468284 ANKRD13DQ6ZTN6 518 aa16.88■□□□□ 0.29
CKAP2-205ENST00000468284 KDM4FA0A1W2PPD8 638 aa16.87■□□□□ 0.29
CKAP2-205ENST00000468284 RNF166Q96A37 237 aaPredicted RBP16.87■□□□□ 0.29
CKAP2-205ENST00000468284 LSM11P83369 360 aaKnown RBP eCLIP16.86■□□□□ 0.29
CKAP2-205ENST00000468284 MYT1LQ9UL68 1186 aa16.86■□□□□ 0.29
CKAP2-205ENST00000468284 KIF13AQ9H1H9 1805 aa16.85■□□□□ 0.29
CKAP2-205ENST00000468284 PBX2P40425 430 aa16.85■□□□□ 0.29
CKAP2-205ENST00000468284 WDR97A6NE52 1622 aa16.85■□□□□ 0.29
CKAP2-205ENST00000468284 GTPBP6O43824 516 aaPredicted RBP16.83■□□□□ 0.28
CKAP2-205ENST00000468284 PTGER2P43116 358 aa16.83■□□□□ 0.28
CKAP2-205ENST00000468284 CRISPLD2Q9H0B8 497 aa16.83■□□□□ 0.28
CKAP2-205ENST00000468284 TBC1D12O60347 775 aa16.82■□□□□ 0.28
CKAP2-205ENST00000468284 PSDA5PKW4 1024 aaPredicted RBP16.81■□□□□ 0.28
CKAP2-205ENST00000468284 PBRM1Q86U86 1689 aa16.81■□□□□ 0.28
CKAP2-205ENST00000468284 POTEEQ6S8J3 1075 aa16.8■□□□□ 0.28
CKAP2-205ENST00000468284 AXIN2Q9Y2T1 843 aa16.8■□□□□ 0.28
CKAP2-205ENST00000468284 CUX1P39880 1505 aa16.8■□□□□ 0.28
CKAP2-205ENST00000468284 CEP170Q5SW79 1584 aa16.77■□□□□ 0.27
CKAP2-205ENST00000468284 PPP1R15BQ5SWA1 713 aa16.76■□□□□ 0.27
CKAP2-205ENST00000468284 NCKAP5LQ9HCH0 1330 aa16.75■□□□□ 0.27
CKAP2-205ENST00000468284 PDE4AP27815 886 aa16.74■□□□□ 0.27
CKAP2-205ENST00000468284 UPF1Q92900 1129 aaKnown RBP eCLIP16.73■□□□□ 0.27
CKAP2-205ENST00000468284 OXER1Q8TDS5 423 aa16.72■□□□□ 0.27
CKAP2-205ENST00000468284 ARHGAP33O14559 1287 aa16.71■□□□□ 0.27
CKAP2-205ENST00000468284 GRIN2AQ12879 1464 aa16.7■□□□□ 0.26
CKAP2-205ENST00000468284 FAM69CQ0P6D2 419 aa16.7■□□□□ 0.26
CKAP2-205ENST00000468284 PPP4R3BQ5MIZ7 849 aa16.7■□□□□ 0.26
CKAP2-205ENST00000468284 ABCA5Q8WWZ7 1642 aa16.68■□□□□ 0.26
CKAP2-205ENST00000468284 SHROOM2Q13796 1616 aa16.67■□□□□ 0.26
CKAP2-205ENST00000468284 NUP160Q12769 1436 aa16.66■□□□□ 0.26
CKAP2-205ENST00000468284 LARP6Q9BRS8 491 aaKnown RBP16.65■□□□□ 0.26
CKAP2-205ENST00000468284 ABCC10Q5T3U5 1492 aa16.65■□□□□ 0.26
CKAP2-205ENST00000468284 DDX27Q96GQ7 796 aaKnown RBP16.64■□□□□ 0.25
CKAP2-205ENST00000468284 KDM6BO15054 1643 aa16.63■□□□□ 0.25
CKAP2-205ENST00000468284 ABCA10Q8WWZ4 1543 aa16.62■□□□□ 0.25
CKAP2-205ENST00000468284 ADGRD1Q6QNK2 874 aa16.62■□□□□ 0.25
CKAP2-205ENST00000468284 PSEN2P49810 448 aa16.61■□□□□ 0.25
CKAP2-205ENST00000468284 ADAMTS12P58397 1594 aa16.6■□□□□ 0.25
CKAP2-205ENST00000468284 DIP2BQ9P265 1576 aa16.6■□□□□ 0.25
CKAP2-205ENST00000468284 DMRTA1Q5VZB9 504 aa16.59■□□□□ 0.25
CKAP2-205ENST00000468284 PRG4Q92954 1404 aaPredicted RBP16.59■□□□□ 0.25
CKAP2-205ENST00000468284 MFSD10Q14728 455 aa16.58■□□□□ 0.24
CKAP2-205ENST00000468284 ZNF454Q8N9F8 522 aa16.57■□□□□ 0.24
CKAP2-205ENST00000468284 TK2O00142 265 aa16.56■□□□□ 0.24
CKAP2-205ENST00000468284 TSPOAP1O95153 1857 aa16.55■□□□□ 0.24
CKAP2-205ENST00000468284 KCNH8Q96L42 1107 aa16.55■□□□□ 0.24
CKAP2-205ENST00000468284 KCNK17Q96T54 332 aa16.55■□□□□ 0.24
CKAP2-205ENST00000468284 CADPS2Q86UW7 1296 aa16.54■□□□□ 0.24
CKAP2-205ENST00000468284 MAPKBP1O60336 1514 aa16.54■□□□□ 0.24
CKAP2-205ENST00000468284 JPH4Q96JJ6 628 aa16.52■□□□□ 0.24
CKAP2-205ENST00000468284 EVI5O60447 810 aa16.51■□□□□ 0.23
CKAP2-205ENST00000468284 ADCY10Q96PN6 1610 aa16.51■□□□□ 0.23
CKAP2-205ENST00000468284 HECW2Q9P2P5 1572 aa16.51■□□□□ 0.23
CKAP2-205ENST00000468284 FHAD1B1AJZ9 1412 aa16.5■□□□□ 0.23
CKAP2-205ENST00000468284 ADGRL1O94910 1474 aa16.49■□□□□ 0.23
CKAP2-205ENST00000468284 FOSBP53539 338 aa16.49■□□□□ 0.23
CKAP2-205ENST00000468284 ANO8Q9HCE9 1232 aaPredicted RBP16.49■□□□□ 0.23
CKAP2-205ENST00000468284 HRO43593 1189 aa16.48■□□□□ 0.23
CKAP2-205ENST00000468284 MAP3K9P80192 1104 aa16.48■□□□□ 0.23
CKAP2-205ENST00000468284 BBXQ8WY36 941 aaPredicted RBP16.47■□□□□ 0.23
CKAP2-205ENST00000468284 BCL2L12Q9HB09 334 aa16.47■□□□□ 0.23
CKAP2-205ENST00000468284 EMILIN3Q9NT22 766 aa16.46■□□□□ 0.23
CKAP2-205ENST00000468284 AMER1Q5JTC6 1135 aaPredicted RBP16.43■□□□□ 0.22
CKAP2-205ENST00000468284 STAC3Q96MF2 364 aa16.42■□□□□ 0.22
CKAP2-205ENST00000468284 WRNQ14191 1432 aaPredicted RBP eCLIP16.41■□□□□ 0.22
CKAP2-205ENST00000468284 PTPREP23469 700 aa16.4■□□□□ 0.22
CKAP2-205ENST00000468284 VPS9D1Q9Y2B5 631 aa16.4■□□□□ 0.22
CKAP2-205ENST00000468284 RUSC2Q8N2Y8 1516 aa16.4■□□□□ 0.22
CKAP2-205ENST00000468284 ZDHHC16Q969W1 377 aa16.39■□□□□ 0.21
CKAP2-205ENST00000468284 HCSTQ9UBK5 93 aa16.39■□□□□ 0.21
CKAP2-205ENST00000468284 ERICH3Q5RHP9 1530 aa16.37■□□□□ 0.21
CKAP2-205ENST00000468284 PPRC1Q5VV67 1664 aaKnown RBP16.37■□□□□ 0.21
CKAP2-205ENST00000468284 COL17A1Q9UMD9 1497 aaPredicted RBP16.36■□□□□ 0.21
CKAP2-205ENST00000468284 ADAM33Q9BZ11 813 aa16.36■□□□□ 0.21
CKAP2-205ENST00000468284 SLC4A5Q9BY07 1137 aa16.35■□□□□ 0.21
CKAP2-205ENST00000468284 FBXO41Q8TF61 875 aa16.33■□□□□ 0.2
CKAP2-205ENST00000468284 KCTD12Q96CX2 325 aaKnown RBP16.33■□□□□ 0.2
CKAP2-205ENST00000468284 CAMK2BQ13554 666 aa16.32■□□□□ 0.2
CKAP2-205ENST00000468284 RTN4Q9NQC3 1192 aaKnown RBP16.32■□□□□ 0.2
CKAP2-205ENST00000468284 TTBK1Q5TCY1 1321 aaPredicted RBP16.3■□□□□ 0.2
CKAP2-205ENST00000468284 SPRYD3Q8NCJ5 442 aa16.3■□□□□ 0.2
CKAP2-205ENST00000468284 ZBED2Q9BTP6 218 aa16.3■□□□□ 0.2
CKAP2-205ENST00000468284 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.3■□□□□ 0.2
CKAP2-205ENST00000468284 PCDHGA10Q9Y5H3 936 aa16.3■□□□□ 0.2
CKAP2-205ENST00000468284 BIVM-ERCC5R4GMW8 1640 aa16.29■□□□□ 0.2
CKAP2-205ENST00000468284 TOP2BQ02880 1626 aa16.28■□□□□ 0.2
CKAP2-205ENST00000468284 DPYSL4O14531 572 aa16.26■□□□□ 0.19
CKAP2-205ENST00000468284 PLA2G2EQ9NZK7 142 aa16.25■□□□□ 0.19
CKAP2-205ENST00000468284 ASXL2Q76L83 1435 aa16.25■□□□□ 0.19
CKAP2-205ENST00000468284 BHMG1C9JSJ3 638 aaPredicted RBP16.24■□□□□ 0.19
CKAP2-205ENST00000468284 PHF14O94880 888 aa16.24■□□□□ 0.19
CKAP2-205ENST00000468284 GLI2P10070 1586 aa16.23■□□□□ 0.19
CKAP2-205ENST00000468284 TYW1BQ6NUM6 668 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms