RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 NBPF1Q3BBV0 1214 aa14.19□□□□□ -0.14
UFD1-206ENST00000466373 ARHGEF12Q9NZN5 1544 aa14.18□□□□□ -0.14
UFD1-206ENST00000466373 TMC1Q8TDI8 760 aa14.18□□□□□ -0.14
UFD1-206ENST00000466373 PLEKHH2Q8IVE3 1493 aa14.17□□□□□ -0.14
UFD1-206ENST00000466373 ARID4BQ4LE39 1312 aaPredicted RBP14.16□□□□□ -0.14
UFD1-206ENST00000466373 B4GALNT3Q6L9W6 998 aa14.16□□□□□ -0.14
UFD1-206ENST00000466373 ABCC2Q92887 1545 aa14.15□□□□□ -0.14
UFD1-206ENST00000466373 PLA2R1Q13018 1463 aa14.14□□□□□ -0.15
UFD1-206ENST00000466373 SHROOM2Q13796 1616 aa14.14□□□□□ -0.15
UFD1-206ENST00000466373 PNISRQ8TF01 805 aaKnown RBP14.13□□□□□ -0.15
UFD1-206ENST00000466373 PPP4R2Q9NY27 417 aa14.13□□□□□ -0.15
UFD1-206ENST00000466373 PRAG1Q86YV5 1406 aa14.12□□□□□ -0.15
UFD1-206ENST00000466373 MYO5CQ9NQX4 1742 aa14.12□□□□□ -0.15
UFD1-206ENST00000466373 MYT1Q01538 1121 aa14.11□□□□□ -0.15
UFD1-206ENST00000466373 EFCAB2Q5VUJ9 269 aa14.11□□□□□ -0.15
UFD1-206ENST00000466373 SALL2Q9Y467 1007 aaPredicted RBP14.11□□□□□ -0.15
UFD1-206ENST00000466373 AFAP1Q8N556 730 aa14.1□□□□□ -0.15
UFD1-206ENST00000466373 A2MP01023 1474 aa14.1□□□□□ -0.15
UFD1-206ENST00000466373 TRAPPC8Q9Y2L5 1435 aa14.08□□□□□ -0.16
UFD1-206ENST00000466373 NUDCQ9Y266 331 aa14.08□□□□□ -0.16
UFD1-206ENST00000466373 UNC13BO14795 1591 aa14.08□□□□□ -0.16
UFD1-206ENST00000466373 PLCH2O75038 1416 aa14.08□□□□□ -0.16
UFD1-206ENST00000466373 MAST1Q9Y2H9 1570 aa14.08□□□□□ -0.16
UFD1-206ENST00000466373 TRPM1Q7Z4N2 1603 aa14.07□□□□□ -0.16
UFD1-206ENST00000466373 ERICH6BQ5W0A0 696 aa14.07□□□□□ -0.16
UFD1-206ENST00000466373 MYBBP1AQ9BQG0 1328 aaKnown RBP14.07□□□□□ -0.16
UFD1-206ENST00000466373 ZCCHC11Q5TAX3 1644 aaKnown RBP14.07□□□□□ -0.16
UFD1-206ENST00000466373 CC2D1BQ5T0F9 858 aaKnown RBP14.07□□□□□ -0.16
UFD1-206ENST00000466373 SMG6Q86US8 1419 aaKnown RBP14.06□□□□□ -0.16
UFD1-206ENST00000466373 RALBP1Q15311 655 aa14.06□□□□□ -0.16
UFD1-206ENST00000466373 MYT1LQ9UL68 1186 aa14.06□□□□□ -0.16
UFD1-206ENST00000466373 DUOX2Q9NRD8 1548 aa14.06□□□□□ -0.16
UFD1-206ENST00000466373 DISP3Q9P2K9 1392 aa14.05□□□□□ -0.16
UFD1-206ENST00000466373 ANP32EQ9BTT0 268 aa14.05□□□□□ -0.16
UFD1-206ENST00000466373 PLXNC1O60486 1568 aa14.05□□□□□ -0.16
UFD1-206ENST00000466373 SPAG9O60271 1321 aaKnown RBP14.05□□□□□ -0.16
UFD1-206ENST00000466373 IQGAP3Q86VI3 1631 aa14.04□□□□□ -0.16
UFD1-206ENST00000466373 TESK2Q96S53 571 aa14.04□□□□□ -0.16
UFD1-206ENST00000466373 PANK3Q9H999 370 aa14.03□□□□□ -0.16
UFD1-206ENST00000466373 BRD4O60885 1362 aaPredicted RBP14.03□□□□□ -0.16
UFD1-206ENST00000466373 KTN1Q86UP2 1357 aaKnown RBP14.03□□□□□ -0.16
UFD1-206ENST00000466373 ERBINQ96RT1 1412 aa14.02□□□□□ -0.16
UFD1-206ENST00000466373 PER1O15534 1290 aaPredicted RBP14.02□□□□□ -0.17
UFD1-206ENST00000466373 NLRP13Q86W25 1043 aa14.01□□□□□ -0.17
UFD1-206ENST00000466373 GPRASP1Q5JY77 1395 aa14.01□□□□□ -0.17
UFD1-206ENST00000466373 ABCC1P33527 1531 aa14.01□□□□□ -0.17
UFD1-206ENST00000466373 E9PCH4 1651 aa14.01□□□□□ -0.17
UFD1-206ENST00000466373 LRPPRCP42704 1394 aaKnown RBP14□□□□□ -0.17
UFD1-206ENST00000466373 CLASP1Q7Z460 1538 aa14□□□□□ -0.17
UFD1-206ENST00000466373 TMF1P82094 1093 aa13.99□□□□□ -0.17
UFD1-206ENST00000466373 MSH5O43196 834 aa13.99□□□□□ -0.17
UFD1-206ENST00000466373 PARD3Q8TEW0 1356 aa13.99□□□□□ -0.17
UFD1-206ENST00000466373 COL17A1Q9UMD9 1497 aaPredicted RBP13.99□□□□□ -0.17
UFD1-206ENST00000466373 MAGI2Q86UL8 1455 aa13.98□□□□□ -0.17
UFD1-206ENST00000466373 PRDM15P57071 1507 aaPredicted RBP13.98□□□□□ -0.17
UFD1-206ENST00000466373 CCDC136Q96JN2 1154 aa13.98□□□□□ -0.17
UFD1-206ENST00000466373 KIF3BO15066 747 aa13.97□□□□□ -0.17
UFD1-206ENST00000466373 UHRF1BP1LA0JNW5 1464 aa13.97□□□□□ -0.17
UFD1-206ENST00000466373 ATP10AO60312 1499 aa13.96□□□□□ -0.17
UFD1-206ENST00000466373 RNF123Q5XPI4 1314 aa13.95□□□□□ -0.18
UFD1-206ENST00000466373 CDCA7LQ96GN5 454 aa13.94□□□□□ -0.18
UFD1-206ENST00000466373 SCAPERQ9BY12 1400 aa13.94□□□□□ -0.18
UFD1-206ENST00000466373 EIF2AK4Q9P2K8 1649 aaKnown RBP13.94□□□□□ -0.18
UFD1-206ENST00000466373 ZFYVE16Q7Z3T8 1539 aa13.94□□□□□ -0.18
UFD1-206ENST00000466373 FANCAO15360 1455 aa13.93□□□□□ -0.18
UFD1-206ENST00000466373 WDR7Q9Y4E6 1490 aa13.92□□□□□ -0.18
UFD1-206ENST00000466373 RCAN3Q9UKA8 241 aa13.91□□□□□ -0.18
UFD1-206ENST00000466373 FANCIQ9NVI1 1328 aa13.91□□□□□ -0.18
UFD1-206ENST00000466373 LAMC1P11047 1609 aa13.91□□□□□ -0.18
UFD1-206ENST00000466373 KNSTRNQ9Y448 316 aa13.9□□□□□ -0.18
UFD1-206ENST00000466373 RTEL1-TNFRSF6BF6WH68 1400 aa13.9□□□□□ -0.18
UFD1-206ENST00000466373 RRP1P56182 461 aaKnown RBP13.89□□□□□ -0.19
UFD1-206ENST00000466373 KANK1Q14678 1352 aa13.89□□□□□ -0.19
UFD1-206ENST00000466373 WASHC2CQ9Y4E1 1318 aa13.89□□□□□ -0.19
UFD1-206ENST00000466373 ADGRL1O94910 1474 aa13.89□□□□□ -0.19
UFD1-206ENST00000466373 MADDQ8WXG6 1647 aa13.89□□□□□ -0.19
UFD1-206ENST00000466373 EXOC6Q8TAG9 804 aa13.89□□□□□ -0.19
UFD1-206ENST00000466373 CLTCL1P53675 1640 aa13.89□□□□□ -0.19
UFD1-206ENST00000466373 TRPM2O94759 1503 aa13.88□□□□□ -0.19
UFD1-206ENST00000466373 ATP7AQ04656 1500 aa13.88□□□□□ -0.19
UFD1-206ENST00000466373 CFAP70Q5T0N1 1121 aa13.88□□□□□ -0.19
UFD1-206ENST00000466373 SPHKAPQ2M3C7 1700 aa13.88□□□□□ -0.19
UFD1-206ENST00000466373 UGGT1Q9NYU2 1555 aa13.88□□□□□ -0.19
UFD1-206ENST00000466373 RNF17Q9BXT8 1623 aaKnown RBP13.88□□□□□ -0.19
UFD1-206ENST00000466373 ADAMTS8Q9UP79 889 aa13.87□□□□□ -0.19
UFD1-206ENST00000466373 PLIN1O60240 522 aa13.87□□□□□ -0.19
UFD1-206ENST00000466373 ERICH6Q7L0X2 663 aa13.87□□□□□ -0.19
UFD1-206ENST00000466373 PTPRTO14522 1441 aa13.86□□□□□ -0.19
UFD1-206ENST00000466373 CHGAP10645 457 aaKnown RBP13.86□□□□□ -0.19
UFD1-206ENST00000466373 ASXL2Q76L83 1435 aa13.86□□□□□ -0.19
UFD1-206ENST00000466373 ARAP3Q8WWN8 1544 aa13.85□□□□□ -0.19
UFD1-206ENST00000466373 ADGRF5Q8IZF2 1346 aa13.85□□□□□ -0.19
UFD1-206ENST00000466373 PPP2R1AP30153 589 aa13.85□□□□□ -0.19
UFD1-206ENST00000466373 CEP152O94986 1710 aa13.85□□□□□ -0.19
UFD1-206ENST00000466373 SCAF11Q99590 1463 aaKnown RBP13.85□□□□□ -0.19
UFD1-206ENST00000466373 PDE3BQ13370 1112 aa13.84□□□□□ -0.19
UFD1-206ENST00000466373 AMER1Q5JTC6 1135 aaPredicted RBP13.84□□□□□ -0.19
UFD1-206ENST00000466373 ABCA9Q8IUA7 1624 aa13.84□□□□□ -0.19
UFD1-206ENST00000466373 TET3O43151 1660 aa13.83□□□□□ -0.19
UFD1-206ENST00000466373 DEPDC5O75140 1603 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms