RNA–Protein interactions for RNA: ENST00000463308.1

NDUFA4-202, Transcript of NDUFA4, mitochondrial complex associated, humanhuman

TSL 2

Gene NDUFA4, Length 288 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4-202ENST00000463308 EVI5O60447 810 aa9.03□□□□□ -0.96
NDUFA4-202ENST00000463308 KIAA1468Q9P260 1216 aa9.03□□□□□ -0.96
NDUFA4-202ENST00000463308 HPS5Q9UPZ3 1129 aa9.03□□□□□ -0.96
NDUFA4-202ENST00000463308 LRCH3Q96II8 777 aa9.02□□□□□ -0.97
NDUFA4-202ENST00000463308 FAM98CQ17RN3 349 aaKnown RBP9.01□□□□□ -0.97
NDUFA4-202ENST00000463308 COL9A1P20849 921 aa9□□□□□ -0.97
NDUFA4-202ENST00000463308 PPP1R15BQ5SWA1 713 aa9□□□□□ -0.97
NDUFA4-202ENST00000463308 PPP1R18Q6NYC8 613 aa9□□□□□ -0.97
NDUFA4-202ENST00000463308 FBXW7Q969H0 707 aa8.99□□□□□ -0.97
NDUFA4-202ENST00000463308 TJAP1Q5JTD0 557 aa8.98□□□□□ -0.97
NDUFA4-202ENST00000463308 ECM2O94769 699 aaPredicted RBP8.97□□□□□ -0.97
NDUFA4-202ENST00000463308 TREML4Q6UXN2 200 aa8.97□□□□□ -0.97
NDUFA4-202ENST00000463308 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.97□□□□□ -0.97
NDUFA4-202ENST00000463308 SEPT9Q9UHD8 586 aaPredicted RBP8.97□□□□□ -0.97
NDUFA4-202ENST00000463308 CRISPLD2Q9H0B8 497 aa8.96□□□□□ -0.98
NDUFA4-202ENST00000463308 PCDHGA10Q9Y5H3 936 aa8.96□□□□□ -0.98
NDUFA4-202ENST00000463308 IL21Q9HBE4 155 aa8.95□□□□□ -0.98
NDUFA4-202ENST00000463308 PPP4CP60510 307 aa8.94□□□□□ -0.98
NDUFA4-202ENST00000463308 LCE2AQ5TA79 106 aaPredicted RBP8.94□□□□□ -0.98
NDUFA4-202ENST00000463308 TYW1BQ6NUM6 668 aa8.94□□□□□ -0.98
NDUFA4-202ENST00000463308 STK17AQ9UEE5 414 aa8.93□□□□□ -0.98
NDUFA4-202ENST00000463308 TRIM6-TRIM34B2RNG4 842 aa8.92□□□□□ -0.98
NDUFA4-202ENST00000463308 PKDCCQ504Y2 493 aa8.92□□□□□ -0.98
NDUFA4-202ENST00000463308 DGAT1O75907 488 aa8.91□□□□□ -0.98
NDUFA4-202ENST00000463308 PHF14O94880 888 aa8.91□□□□□ -0.98
NDUFA4-202ENST00000463308 MTRQ99707 1265 aa8.91□□□□□ -0.98
NDUFA4-202ENST00000463308 GGCXP38435 758 aa8.9□□□□□ -0.98
NDUFA4-202ENST00000463308 MAP3K9P80192 1104 aa8.9□□□□□ -0.98
NDUFA4-202ENST00000463308 LOC100996750A0A140TA64 210 aa8.89□□□□□ -0.99
NDUFA4-202ENST00000463308 MYT1Q01538 1121 aa8.89□□□□□ -0.99
NDUFA4-202ENST00000463308 KRTAP4-6Q9BYQ5 205 aa8.89□□□□□ -0.99
NDUFA4-202ENST00000463308 RGL2O15211 777 aa8.88□□□□□ -0.99
NDUFA4-202ENST00000463308 PDE4AP27815 886 aa8.87□□□□□ -0.99
NDUFA4-202ENST00000463308 POTECB2RU33 542 aa8.86□□□□□ -0.99
NDUFA4-202ENST00000463308 TMUB1Q9BVT8 246 aa8.86□□□□□ -0.99
NDUFA4-202ENST00000463308 C6orf132Q5T0Z8 1188 aa8.85□□□□□ -0.99
NDUFA4-202ENST00000463308 PRR20EP86478 221 aa8.82□□□□□ -1
NDUFA4-202ENST00000463308 PRR20CP86479 221 aa8.82□□□□□ -1
NDUFA4-202ENST00000463308 PRR20DP86480 221 aa8.82□□□□□ -1
NDUFA4-202ENST00000463308 PRR20BP86481 221 aa8.82□□□□□ -1
NDUFA4-202ENST00000463308 PRR20AP86496 221 aa8.82□□□□□ -1
NDUFA4-202ENST00000463308 INSM1Q01101 510 aaPredicted RBP8.82□□□□□ -1
NDUFA4-202ENST00000463308 TRIM67Q6ZTA4 783 aa8.82□□□□□ -1
NDUFA4-202ENST00000463308 EPAS1Q99814 870 aa8.82□□□□□ -1
NDUFA4-202ENST00000463308 RYDENQ9NUL5 291 aaKnown RBP8.82□□□□□ -1
NDUFA4-202ENST00000463308 PACS2Q86VP3 889 aa8.81□□□□□ -1
NDUFA4-202ENST00000463308 ZNF516Q92618 1163 aa8.8□□□□□ -1
NDUFA4-202ENST00000463308 NCKAP5LQ9HCH0 1330 aa8.8□□□□□ -1
NDUFA4-202ENST00000463308 WFS1O76024 890 aa8.79□□□□□ -1
NDUFA4-202ENST00000463308 HS6ST3Q8IZP7 471 aa8.78□□□□□ -1
NDUFA4-202ENST00000463308 DDX27Q96GQ7 796 aaKnown RBP8.78□□□□□ -1
NDUFA4-202ENST00000463308 WIPF1O43516 503 aa8.77□□□□□ -1.01
NDUFA4-202ENST00000463308 SAMD7Q7Z3H4 446 aa8.77□□□□□ -1.01
NDUFA4-202ENST00000463308 SLC19A1P41440 591 aa8.76□□□□□ -1.01
NDUFA4-202ENST00000463308 NKX2-3Q8TAU0 364 aa8.74□□□□□ -1.01
NDUFA4-202ENST00000463308 NECTIN2Q92692 538 aa8.74□□□□□ -1.01
NDUFA4-202ENST00000463308 FAM187AA6NFU0 413 aa8.73□□□□□ -1.01
NDUFA4-202ENST00000463308 ZNF598Q86UK7 904 aaKnown RBP8.73□□□□□ -1.01
NDUFA4-202ENST00000463308 EMILIN3Q9NT22 766 aa8.73□□□□□ -1.01
NDUFA4-202ENST00000463308 PKD2Q13563 968 aa8.72□□□□□ -1.01
NDUFA4-202ENST00000463308 SPRYD7Q5W111 196 aa8.72□□□□□ -1.01
NDUFA4-202ENST00000463308 LARP6Q9BRS8 491 aaKnown RBP8.72□□□□□ -1.01
NDUFA4-202ENST00000463308 TSKSQ9UJT2 592 aa8.72□□□□□ -1.01
NDUFA4-202ENST00000463308 MFSD10Q14728 455 aa8.71□□□□□ -1.02
NDUFA4-202ENST00000463308 AAASQ9NRG9 546 aa8.71□□□□□ -1.02
NDUFA4-202ENST00000463308 APLP1P51693 650 aa8.69□□□□□ -1.02
NDUFA4-202ENST00000463308 HDGFP51858 240 aaKnown RBP8.69□□□□□ -1.02
NDUFA4-202ENST00000463308 ST8SIA5O15466 376 aa8.67□□□□□ -1.02
NDUFA4-202ENST00000463308 NFX1Q12986 1120 aaKnown RBP8.67□□□□□ -1.02
NDUFA4-202ENST00000463308 RBM33Q96EV2 1170 aaKnown RBP8.67□□□□□ -1.02
NDUFA4-202ENST00000463308 RNF223E7ERA6 249 aa8.66□□□□□ -1.02
NDUFA4-202ENST00000463308 CRIPAKQ8N1N5 446 aa8.66□□□□□ -1.02
NDUFA4-202ENST00000463308 DNAJC5Q9H3Z4 198 aa8.66□□□□□ -1.02
NDUFA4-202ENST00000463308 FAM181BA6NEQ2 426 aa8.65□□□□□ -1.02
NDUFA4-202ENST00000463308 GDF9O60383 454 aa8.65□□□□□ -1.02
NDUFA4-202ENST00000463308 ZPR1O75312 459 aa8.65□□□□□ -1.02
NDUFA4-202ENST00000463308 COPS2P61201 443 aa8.65□□□□□ -1.02
NDUFA4-202ENST00000463308 ZNF697Q5TEC3 545 aa8.65□□□□□ -1.02
NDUFA4-202ENST00000463308 EMID1Q96A84 441 aaPredicted RBP8.65□□□□□ -1.02
NDUFA4-202ENST00000463308 NBPF26B4DH59 902 aa8.64□□□□□ -1.03
NDUFA4-202ENST00000463308 RNF40O75150 1001 aa8.64□□□□□ -1.03
NDUFA4-202ENST00000463308 SMAPO00193 183 aa8.63□□□□□ -1.03
NDUFA4-202ENST00000463308 ANKLE1Q8NAG6 615 aa8.63□□□□□ -1.03
NDUFA4-202ENST00000463308 CDCA7LQ96GN5 454 aa8.63□□□□□ -1.03
NDUFA4-202ENST00000463308 EN1Q05925 392 aaPredicted RBP8.62□□□□□ -1.03
NDUFA4-202ENST00000463308 C11orf95C9JLR9 678 aaPredicted RBP8.61□□□□□ -1.03
NDUFA4-202ENST00000463308 TNFRSF10AO00220 468 aa8.61□□□□□ -1.03
NDUFA4-202ENST00000463308 CERKQ8TCT0 537 aa8.61□□□□□ -1.03
NDUFA4-202ENST00000463308 TATDN2Q93075 761 aa8.61□□□□□ -1.03
NDUFA4-202ENST00000463308 PRSS12P56730 875 aa8.6□□□□□ -1.03
NDUFA4-202ENST00000463308 PRR14Q9BWN1 585 aa8.6□□□□□ -1.03
NDUFA4-202ENST00000463308 MAP3K7O43318 606 aa8.59□□□□□ -1.03
NDUFA4-202ENST00000463308 NKX1-1Q15270 411 aaPredicted RBP8.59□□□□□ -1.03
NDUFA4-202ENST00000463308 LMOD2Q6P5Q4 547 aa8.59□□□□□ -1.03
NDUFA4-202ENST00000463308 PNMA3Q9UL41 463 aa8.59□□□□□ -1.03
NDUFA4-202ENST00000463308 TSR1Q2NL82 804 aaKnown RBP8.58□□□□□ -1.04
NDUFA4-202ENST00000463308 SLF2Q8IX21 1173 aa8.58□□□□□ -1.04
NDUFA4-202ENST00000463308 CHGAP10645 457 aaKnown RBP8.56□□□□□ -1.04
NDUFA4-202ENST00000463308 SLC4A3P48751 1232 aa8.56□□□□□ -1.04
NDUFA4-202ENST00000463308 CTC1Q2NKJ3 1217 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms