RNA–Protein interactions for RNA: ENST00000462991.5

CHD5-203, Transcript of chromodomain helicase DNA binding protein 5, humanhuman

TSL 1 (best)

Gene CHD5, Length 4,396 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5-203ENST00000462991 NUP160Q12769 1436 aa13.32□□□□□ -0.28
CHD5-203ENST00000462991 CCER2I3L3R5 266 aa13.32□□□□□ -0.28
CHD5-203ENST00000462991 TRAK1Q9UPV9 953 aa13.31□□□□□ -0.28
CHD5-203ENST00000462991 LMOD2Q6P5Q4 547 aa13.31□□□□□ -0.28
CHD5-203ENST00000462991 C9orf84Q5VXU9 1444 aa13.31□□□□□ -0.28
CHD5-203ENST00000462991 ATP10BO94823 1461 aa13.31□□□□□ -0.28
CHD5-203ENST00000462991 WASHC2AQ641Q2 1341 aa13.3□□□□□ -0.28
CHD5-203ENST00000462991 ROCK1Q13464 1354 aa13.3□□□□□ -0.28
CHD5-203ENST00000462991 A0A0G2JS52 829 aa13.3□□□□□ -0.28
CHD5-203ENST00000462991 EIF5BO60841 1220 aaKnown RBP13.3□□□□□ -0.28
CHD5-203ENST00000462991 AKNAQ7Z591 1439 aa13.29□□□□□ -0.28
CHD5-203ENST00000462991 SOX12O15370 315 aa13.29□□□□□ -0.28
CHD5-203ENST00000462991 U2SURPO15042 1029 aaKnown RBP13.28□□□□□ -0.28
CHD5-203ENST00000462991 KDM6BO15054 1643 aa13.28□□□□□ -0.28
CHD5-203ENST00000462991 KIF14Q15058 1648 aa13.28□□□□□ -0.28
CHD5-203ENST00000462991 MORC1Q86VD1 984 aa13.28□□□□□ -0.28
CHD5-203ENST00000462991 NCOA1Q15788 1441 aa13.28□□□□□ -0.28
CHD5-203ENST00000462991 ANP32BQ92688 251 aaKnown RBP13.27□□□□□ -0.28
CHD5-203ENST00000462991 SCAPERQ9BY12 1400 aa13.26□□□□□ -0.29
CHD5-203ENST00000462991 USP47Q96K76 1375 aa13.26□□□□□ -0.29
CHD5-203ENST00000462991 ANKRD30BQ9BXX2 1392 aa13.26□□□□□ -0.29
CHD5-203ENST00000462991 RAPGEF3O95398 923 aa13.26□□□□□ -0.29
CHD5-203ENST00000462991 KTN1Q86UP2 1357 aaKnown RBP13.26□□□□□ -0.29
CHD5-203ENST00000462991 NUDCQ9Y266 331 aa13.26□□□□□ -0.29
CHD5-203ENST00000462991 MYH16Q9H6N6 1097 aa13.25□□□□□ -0.29
CHD5-203ENST00000462991 MAPK8IP3Q9UPT6 1336 aa13.24□□□□□ -0.29
CHD5-203ENST00000462991 EIF3AQ14152 1382 aaKnown RBP13.24□□□□□ -0.29
CHD5-203ENST00000462991 C11orf95C9JLR9 678 aaPredicted RBP13.23□□□□□ -0.29
CHD5-203ENST00000462991 KIAA1107Q9UPP5 1409 aa13.23□□□□□ -0.29
CHD5-203ENST00000462991 VGFO15240 615 aaPredicted RBP13.23□□□□□ -0.29
CHD5-203ENST00000462991 B4GALNT3Q6L9W6 998 aa13.22□□□□□ -0.29
CHD5-203ENST00000462991 KIF7Q2M1P5 1343 aa13.22□□□□□ -0.29
CHD5-203ENST00000462991 DNMT1P26358 1616 aaKnown RBP13.21□□□□□ -0.29
CHD5-203ENST00000462991 NUTM2FA1L443 756 aa13.21□□□□□ -0.29
CHD5-203ENST00000462991 HAP1P54257 671 aaPredicted RBP13.21□□□□□ -0.29
CHD5-203ENST00000462991 HDGFL2Q7Z4V5 671 aaPredicted RBP13.21□□□□□ -0.29
CHD5-203ENST00000462991 LAS1LQ9Y4W2 734 aaKnown RBP13.21□□□□□ -0.29
CHD5-203ENST00000462991 EID1Q9Y6B2 187 aa13.21□□□□□ -0.29
CHD5-203ENST00000462991 CCDC7Q96M83 1385 aa13.21□□□□□ -0.29
CHD5-203ENST00000462991 RALBP1Q15311 655 aa13.2□□□□□ -0.3
CHD5-203ENST00000462991 TSHZ2Q9NRE2 1034 aa13.2□□□□□ -0.3
CHD5-203ENST00000462991 ITSN2Q9NZM3 1697 aa13.2□□□□□ -0.3
CHD5-203ENST00000462991 PANK3Q9H999 370 aa13.2□□□□□ -0.3
CHD5-203ENST00000462991 RGS3P49796 1198 aa13.2□□□□□ -0.3
CHD5-203ENST00000462991 FRAT1Q92837 279 aaPredicted RBP13.2□□□□□ -0.3
CHD5-203ENST00000462991 RBM19Q9Y4C8 960 aaKnown RBP13.19□□□□□ -0.3
CHD5-203ENST00000462991 RPRD2Q5VT52 1461 aaKnown RBP13.19□□□□□ -0.3
CHD5-203ENST00000462991 PLEKHH2Q8IVE3 1493 aa13.19□□□□□ -0.3
CHD5-203ENST00000462991 GCC2Q8IWJ2 1684 aa13.18□□□□□ -0.3
CHD5-203ENST00000462991 PRKRIP1Q9H875 184 aaPredicted RBP13.18□□□□□ -0.3
CHD5-203ENST00000462991 CCDC184Q52MB2 194 aa13.18□□□□□ -0.3
CHD5-203ENST00000462991 CCDC141Q6ZP82 1450 aa13.17□□□□□ -0.3
CHD5-203ENST00000462991 FTSJ3Q8IY81 847 aaKnown RBP13.17□□□□□ -0.3
CHD5-203ENST00000462991 PPP4R2Q9NY27 417 aa13.17□□□□□ -0.3
CHD5-203ENST00000462991 NLRP13Q86W25 1043 aa13.16□□□□□ -0.3
CHD5-203ENST00000462991 CNTLNQ9NXG0 1405 aa13.16□□□□□ -0.3
CHD5-203ENST00000462991 MINK1Q8N4C8 1332 aaPredicted RBP13.15□□□□□ -0.3
CHD5-203ENST00000462991 U2AF1L5P0DN76 240 aaPredicted RBP13.15□□□□□ -0.3
CHD5-203ENST00000462991 U2AF1Q01081 240 aaKnown RBP eCLIP13.15□□□□□ -0.3
CHD5-203ENST00000462991 NBPF1Q3BBV0 1214 aa13.15□□□□□ -0.3
CHD5-203ENST00000462991 PAK3O75914 559 aaPredicted RBP13.14□□□□□ -0.31
CHD5-203ENST00000462991 TMEM132EQ6IEE7 984 aa13.14□□□□□ -0.31
CHD5-203ENST00000462991 TERF2IPQ9NYB0 399 aa13.14□□□□□ -0.31
CHD5-203ENST00000462991 PZPP20742 1482 aa13.14□□□□□ -0.31
CHD5-203ENST00000462991 ABCA8O94911 1581 aa13.14□□□□□ -0.31
CHD5-203ENST00000462991 CFAP70Q5T0N1 1121 aa13.14□□□□□ -0.31
CHD5-203ENST00000462991 CHD1O14646 1710 aa13.14□□□□□ -0.31
CHD5-203ENST00000462991 SYCP2Q9BX26 1530 aa13.13□□□□□ -0.31
CHD5-203ENST00000462991 CD109Q6YHK3 1445 aa13.12□□□□□ -0.31
CHD5-203ENST00000462991 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.12□□□□□ -0.31
CHD5-203ENST00000462991 DENND4BO75064 1496 aaPredicted RBP13.12□□□□□ -0.31
CHD5-203ENST00000462991 ERCC6L2Q5T890 1561 aa13.12□□□□□ -0.31
CHD5-203ENST00000462991 BECN1Q14457 450 aa13.11□□□□□ -0.31
CHD5-203ENST00000462991 ABCC10Q5T3U5 1492 aa13.1□□□□□ -0.31
CHD5-203ENST00000462991 DDRGK1Q96HY6 314 aa13.09□□□□□ -0.31
CHD5-203ENST00000462991 NGDNQ8NEJ9 315 aaKnown RBP13.09□□□□□ -0.31
CHD5-203ENST00000462991 EVC2Q86UK5 1308 aa13.09□□□□□ -0.31
CHD5-203ENST00000462991 CCDC146Q8IYE0 955 aa13.09□□□□□ -0.31
CHD5-203ENST00000462991 STAC3Q96MF2 364 aa13.09□□□□□ -0.31
CHD5-203ENST00000462991 CENPJQ9HC77 1338 aaPredicted RBP13.09□□□□□ -0.31
CHD5-203ENST00000462991 MYBBP1AQ9BQG0 1328 aaKnown RBP13.08□□□□□ -0.32
CHD5-203ENST00000462991 PNNQ9H307 717 aaKnown RBP13.08□□□□□ -0.32
CHD5-203ENST00000462991 TEX14Q8IWB6 1497 aa13.07□□□□□ -0.32
CHD5-203ENST00000462991 ADGRL1O94910 1474 aa13.06□□□□□ -0.32
CHD5-203ENST00000462991 ADGRL2O95490 1459 aa13.06□□□□□ -0.32
CHD5-203ENST00000462991 ABCC2Q92887 1545 aa13.06□□□□□ -0.32
CHD5-203ENST00000462991 TPRNQ4KMQ1 711 aa13.05□□□□□ -0.32
CHD5-203ENST00000462991 NOP58Q9Y2X3 529 aaKnown RBP13.04□□□□□ -0.32
CHD5-203ENST00000462991 CDC42BPAQ5VT25 1732 aa13.04□□□□□ -0.32
CHD5-203ENST00000462991 TRAPPC8Q9Y2L5 1435 aa13.04□□□□□ -0.32
CHD5-203ENST00000462991 ADGBQ8N7X0 1667 aa13.03□□□□□ -0.32
CHD5-203ENST00000462991 NCLP19338 710 aaKnown RBP13.03□□□□□ -0.32
CHD5-203ENST00000462991 SHANK2Q9UPX8 1470 aa13.03□□□□□ -0.32
CHD5-203ENST00000462991 RTN4Q9NQC3 1192 aaKnown RBP13.03□□□□□ -0.32
CHD5-203ENST00000462991 FANCAO15360 1455 aa13.02□□□□□ -0.32
CHD5-203ENST00000462991 MBD5Q9P267 1494 aa13.02□□□□□ -0.32
CHD5-203ENST00000462991 CGNL1Q0VF96 1302 aa13.02□□□□□ -0.33
CHD5-203ENST00000462991 TTC37Q6PGP7 1564 aa13.02□□□□□ -0.33
CHD5-203ENST00000462991 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.02□□□□□ -0.33
CHD5-203ENST00000462991 RCAN3Q9UKA8 241 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms