RNA–Protein interactions for RNA: ENST00000461862.5

SCNM1-204, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 1,094 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-204ENST00000461862 KRTAP3-3Q9BYR6 98 aa16.49■□□□□ 0.23
SCNM1-204ENST00000461862 KRTAP3-2Q9BYR7 98 aa16.49■□□□□ 0.23
SCNM1-204ENST00000461862 VARS2Q5ST30 1063 aaKnown RBP16.45■□□□□ 0.22
SCNM1-204ENST00000461862 GPHNQ9NQX3 736 aaPredicted RBP16.45■□□□□ 0.22
SCNM1-204ENST00000461862 CUL7Q14999 1698 aa16.44■□□□□ 0.22
SCNM1-204ENST00000461862 RAPGEF2Q9Y4G8 1499 aa16.44■□□□□ 0.22
SCNM1-204ENST00000461862 SLC34A2O95436 690 aa16.44■□□□□ 0.22
SCNM1-204ENST00000461862 RTN4Q9NQC3 1192 aaKnown RBP16.44■□□□□ 0.22
SCNM1-204ENST00000461862 ADAMTS12P58397 1594 aa16.43■□□□□ 0.22
SCNM1-204ENST00000461862 MAGI1Q96QZ7 1491 aaPredicted RBP16.43■□□□□ 0.22
SCNM1-204ENST00000461862 FOXK1P85037 733 aa16.43■□□□□ 0.22
SCNM1-204ENST00000461862 AMER1Q5JTC6 1135 aaPredicted RBP16.43■□□□□ 0.22
SCNM1-204ENST00000461862 IGF1RP08069 1367 aa16.41■□□□□ 0.22
SCNM1-204ENST00000461862 SYNJ2O15056 1496 aa16.41■□□□□ 0.22
SCNM1-204ENST00000461862 CEP162Q5TB80 1403 aa16.4■□□□□ 0.22
SCNM1-204ENST00000461862 DSG2Q14126 1118 aa16.4■□□□□ 0.22
SCNM1-204ENST00000461862 CHMP7Q8WUX9 453 aaPredicted RBP16.4■□□□□ 0.22
SCNM1-204ENST00000461862 PCDHGA4Q9Y5G9 962 aa16.4■□□□□ 0.22
SCNM1-204ENST00000461862 UBTFP17480 764 aaKnown RBP16.38■□□□□ 0.21
SCNM1-204ENST00000461862 PLPP6Q8IY26 295 aa16.38■□□□□ 0.21
SCNM1-204ENST00000461862 CRISPLD2Q9H0B8 497 aa16.38■□□□□ 0.21
SCNM1-204ENST00000461862 NUDT7P0C024 238 aa16.37■□□□□ 0.21
SCNM1-204ENST00000461862 SPNS2Q8IVW8 549 aa16.37■□□□□ 0.21
SCNM1-204ENST00000461862 CARMIL1Q5VZK9 1371 aa16.35■□□□□ 0.21
SCNM1-204ENST00000461862 FHAD1B1AJZ9 1412 aa16.35■□□□□ 0.21
SCNM1-204ENST00000461862 GRIN2AQ12879 1464 aa16.35■□□□□ 0.21
SCNM1-204ENST00000461862 ZNF316A6NFI3 1004 aaPredicted RBP16.34■□□□□ 0.21
SCNM1-204ENST00000461862 NCKAP5LQ9HCH0 1330 aa16.34■□□□□ 0.21
SCNM1-204ENST00000461862 CEP170Q5SW79 1584 aa16.33■□□□□ 0.2
SCNM1-204ENST00000461862 CLASP1Q7Z460 1538 aa16.32■□□□□ 0.2
SCNM1-204ENST00000461862 ZNF687Q8N1G0 1237 aa16.31■□□□□ 0.2
SCNM1-204ENST00000461862 PTCD2Q8WV60 388 aaKnown RBP16.3■□□□□ 0.2
SCNM1-204ENST00000461862 KDM4FA0A1W2PPD8 638 aa16.28■□□□□ 0.2
SCNM1-204ENST00000461862 LHX6Q9UPM6 363 aa16.28■□□□□ 0.2
SCNM1-204ENST00000461862 NUP160Q12769 1436 aa16.28■□□□□ 0.2
SCNM1-204ENST00000461862 MMRN1Q13201 1228 aa16.27■□□□□ 0.2
SCNM1-204ENST00000461862 CLIP1P30622 1438 aa16.27■□□□□ 0.19
SCNM1-204ENST00000461862 ERCC6L2Q5T890 1561 aa16.26■□□□□ 0.19
SCNM1-204ENST00000461862 CTTNBP2Q8WZ74 1663 aa16.25■□□□□ 0.19
SCNM1-204ENST00000461862 PPP1R15BQ5SWA1 713 aa16.25■□□□□ 0.19
SCNM1-204ENST00000461862 RIMBP3CA6NJZ7 1639 aa16.25■□□□□ 0.19
SCNM1-204ENST00000461862 RIMBP3BA6NNM3 1639 aa16.25■□□□□ 0.19
SCNM1-204ENST00000461862 RIMBP3Q9UFD9 1639 aa16.25■□□□□ 0.19
SCNM1-204ENST00000461862 ARHGEF11O15085 1522 aa16.24■□□□□ 0.19
SCNM1-204ENST00000461862 BBXQ8WY36 941 aaPredicted RBP16.24■□□□□ 0.19
SCNM1-204ENST00000461862 CADPS2Q86UW7 1296 aa16.23■□□□□ 0.19
SCNM1-204ENST00000461862 PDE4AP27815 886 aa16.21■□□□□ 0.19
SCNM1-204ENST00000461862 OXER1Q8TDS5 423 aa16.19■□□□□ 0.18
SCNM1-204ENST00000461862 ARAP1Q96P48 1450 aa16.17■□□□□ 0.18
SCNM1-204ENST00000461862 LARP6Q9BRS8 491 aaKnown RBP16.17■□□□□ 0.18
SCNM1-204ENST00000461862 MFSD10Q14728 455 aa16.16■□□□□ 0.18
SCNM1-204ENST00000461862 VPS8Q8N3P4 1428 aa16.16■□□□□ 0.18
SCNM1-204ENST00000461862 POTEEQ6S8J3 1075 aa16.15■□□□□ 0.18
SCNM1-204ENST00000461862 UPF1Q92900 1129 aaKnown RBP eCLIP16.15■□□□□ 0.18
SCNM1-204ENST00000461862 DDX27Q96GQ7 796 aaKnown RBP16.14■□□□□ 0.17
SCNM1-204ENST00000461862 EFCAB5A4FU69 1503 aa16.14■□□□□ 0.17
SCNM1-204ENST00000461862 SHROOM2Q13796 1616 aa16.12■□□□□ 0.17
SCNM1-204ENST00000461862 CYB5RLQ6IPT4 315 aa16.12■□□□□ 0.17
SCNM1-204ENST00000461862 ARHGAP35Q9NRY4 1499 aa16.11■□□□□ 0.17
SCNM1-204ENST00000461862 TBC1D12O60347 775 aa16.11■□□□□ 0.17
SCNM1-204ENST00000461862 JPH4Q96JJ6 628 aa16.11■□□□□ 0.17
SCNM1-204ENST00000461862 KIAA0586Q9BVV6 1533 aa16.09■□□□□ 0.17
SCNM1-204ENST00000461862 PRG4Q92954 1404 aaPredicted RBP16.09■□□□□ 0.17
SCNM1-204ENST00000461862 AXIN2Q9Y2T1 843 aa16.07■□□□□ 0.16
SCNM1-204ENST00000461862 PBX2P40425 430 aa16.06■□□□□ 0.16
SCNM1-204ENST00000461862 LSM11P83369 360 aaKnown RBP eCLIP16.06■□□□□ 0.16
SCNM1-204ENST00000461862 SAMD9Q5K651 1589 aa16.05■□□□□ 0.16
SCNM1-204ENST00000461862 PSDA5PKW4 1024 aaPredicted RBP16.05■□□□□ 0.16
SCNM1-204ENST00000461862 IQGAP2Q13576 1575 aa16.04■□□□□ 0.16
SCNM1-204ENST00000461862 SPRYD3Q8NCJ5 442 aa16.03■□□□□ 0.16
SCNM1-204ENST00000461862 EMILIN3Q9NT22 766 aa16.03■□□□□ 0.16
SCNM1-204ENST00000461862 TTBK1Q5TCY1 1321 aaPredicted RBP16.02■□□□□ 0.16
SCNM1-204ENST00000461862 ANKRD13DQ6ZTN6 518 aa16.02■□□□□ 0.16
SCNM1-204ENST00000461862 TRIM26Q12899 539 aaPredicted RBP16.01■□□□□ 0.15
SCNM1-204ENST00000461862 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.01■□□□□ 0.15
SCNM1-204ENST00000461862 DISP1Q96F81 1524 aa16■□□□□ 0.15
SCNM1-204ENST00000461862 RANGAP1P46060 587 aaPredicted RBP16■□□□□ 0.15
SCNM1-204ENST00000461862 UGGT2Q9NYU1 1516 aa15.98■□□□□ 0.15
SCNM1-204ENST00000461862 PPP4R3BQ5MIZ7 849 aa15.97■□□□□ 0.15
SCNM1-204ENST00000461862 ARHGAP33O14559 1287 aa15.96■□□□□ 0.15
SCNM1-204ENST00000461862 PAXIP1Q6ZW49 1069 aaPredicted RBP15.96■□□□□ 0.15
SCNM1-204ENST00000461862 MAP3K1Q13233 1512 aa15.95■□□□□ 0.14
SCNM1-204ENST00000461862 EVI5O60447 810 aa15.95■□□□□ 0.14
SCNM1-204ENST00000461862 PSEN2P49810 448 aa15.94■□□□□ 0.14
SCNM1-204ENST00000461862 P3H3Q8IVL6 736 aa15.94■□□□□ 0.14
SCNM1-204ENST00000461862 ANO8Q9HCE9 1232 aaPredicted RBP15.94■□□□□ 0.14
SCNM1-204ENST00000461862 MYT1LQ9UL68 1186 aa15.94■□□□□ 0.14
SCNM1-204ENST00000461862 FMN1Q68DA7 1419 aa15.94■□□□□ 0.14
SCNM1-204ENST00000461862 RNF166Q96A37 237 aaPredicted RBP15.93■□□□□ 0.14
SCNM1-204ENST00000461862 CFAP44Q96MT7 982 aa15.93■□□□□ 0.14
SCNM1-204ENST00000461862 PCF11O94913 1555 aaKnown RBP15.92■□□□□ 0.14
SCNM1-204ENST00000461862 FYCO1Q9BQS8 1478 aa15.92■□□□□ 0.14
SCNM1-204ENST00000461862 CAMK2BQ13554 666 aa15.92■□□□□ 0.14
SCNM1-204ENST00000461862 DMRTA1Q5VZB9 504 aa15.92■□□□□ 0.14
SCNM1-204ENST00000461862 ZNF454Q8N9F8 522 aa15.92■□□□□ 0.14
SCNM1-204ENST00000461862 FHOD3Q2V2M9 1422 aa15.92■□□□□ 0.14
SCNM1-204ENST00000461862 KIAA0556O60303 1618 aa15.91■□□□□ 0.14
SCNM1-204ENST00000461862 PCGF6Q9BYE7 350 aa15.91■□□□□ 0.14
SCNM1-204ENST00000461862 CFAP43Q8NDM7 1665 aa15.91■□□□□ 0.14
SCNM1-204ENST00000461862 PTGER2P43116 358 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms