RNA–Protein interactions for RNA: ENST00000461047.2

NUP98-208, Transcript of nucleoporin 98, humanhuman

TSL 3

Gene NUP98, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-208ENST00000461047 RAPGEF2Q9Y4G8 1499 aa9.59□□□□□ -0.87
NUP98-208ENST00000461047 CUL7Q14999 1698 aa9.59□□□□□ -0.87
NUP98-208ENST00000461047 SLC34A2O95436 690 aa9.59□□□□□ -0.87
NUP98-208ENST00000461047 UBTFP17480 764 aaKnown RBP9.59□□□□□ -0.87
NUP98-208ENST00000461047 FOXK1P85037 733 aa9.59□□□□□ -0.87
NUP98-208ENST00000461047 PLPP6Q8IY26 295 aa9.59□□□□□ -0.87
NUP98-208ENST00000461047 PBRM1Q86U86 1689 aa9.58□□□□□ -0.88
NUP98-208ENST00000461047 POTEB3A0JP26 581 aa9.57□□□□□ -0.88
NUP98-208ENST00000461047 POTEBQ6S5H4 581 aa9.57□□□□□ -0.88
NUP98-208ENST00000461047 BBXQ8WY36 941 aaPredicted RBP9.57□□□□□ -0.88
NUP98-208ENST00000461047 KHSRPQ92945 711 aaKnown RBP eCLIP9.57□□□□□ -0.882e-9■□□□□ 9.6
NUP98-208ENST00000461047 PCDHGA4Q9Y5G9 962 aa9.57□□□□□ -0.88
NUP98-208ENST00000461047 GRIN2AQ12879 1464 aa9.56□□□□□ -0.88
NUP98-208ENST00000461047 NUDT7P0C024 238 aa9.56□□□□□ -0.88
NUP98-208ENST00000461047 PDE4AP27815 886 aa9.56□□□□□ -0.88
NUP98-208ENST00000461047 DSG2Q14126 1118 aa9.56□□□□□ -0.88
NUP98-208ENST00000461047 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.56□□□□□ -0.88
NUP98-208ENST00000461047 ADAMTS12P58397 1594 aa9.55□□□□□ -0.88
NUP98-208ENST00000461047 PRXQ9BXM0 1461 aa9.55□□□□□ -0.88
NUP98-208ENST00000461047 TBC1D12O60347 775 aa9.55□□□□□ -0.88
NUP98-208ENST00000461047 ZNF316A6NFI3 1004 aaPredicted RBP9.54□□□□□ -0.88
NUP98-208ENST00000461047 CRISPLD2Q9H0B8 497 aa9.53□□□□□ -0.88
NUP98-208ENST00000461047 GOLGA3Q08378 1498 aa9.53□□□□□ -0.88
NUP98-208ENST00000461047 PPP1R15BQ5SWA1 713 aa9.52□□□□□ -0.89
NUP98-208ENST00000461047 ZNF687Q8N1G0 1237 aa9.52□□□□□ -0.89
NUP98-208ENST00000461047 PTCD2Q8WV60 388 aaKnown RBP9.51□□□□□ -0.89
NUP98-208ENST00000461047 JPH4Q96JJ6 628 aa9.51□□□□□ -0.89
NUP98-208ENST00000461047 KIAA0586Q9BVV6 1533 aa9.51□□□□□ -0.89
NUP98-208ENST00000461047 NUP160Q12769 1436 aa9.5□□□□□ -0.89
NUP98-208ENST00000461047 LARP6Q9BRS8 491 aaKnown RBP9.5□□□□□ -0.89
NUP98-208ENST00000461047 KRTAP3-3Q9BYR6 98 aa9.5□□□□□ -0.89
NUP98-208ENST00000461047 KRTAP3-2Q9BYR7 98 aa9.5□□□□□ -0.89
NUP98-208ENST00000461047 KIF21BO75037 1637 aa9.49□□□□□ -0.89
NUP98-208ENST00000461047 SPNS2Q8IVW8 549 aa9.49□□□□□ -0.89
NUP98-208ENST00000461047 SPRYD3Q8NCJ5 442 aa9.49□□□□□ -0.89
NUP98-208ENST00000461047 DDX27Q96GQ7 796 aaKnown RBP9.49□□□□□ -0.89
NUP98-208ENST00000461047 PSDA5PKW4 1024 aaPredicted RBP9.48□□□□□ -0.89
NUP98-208ENST00000461047 LHX6Q9UPM6 363 aa9.48□□□□□ -0.89
NUP98-208ENST00000461047 NCKAP5LQ9HCH0 1330 aa9.48□□□□□ -0.89
NUP98-208ENST00000461047 UPF1Q92900 1129 aaKnown RBP eCLIP9.47□□□□□ -0.89
NUP98-208ENST00000461047 CHD1O14646 1710 aa9.47□□□□□ -0.89
NUP98-208ENST00000461047 CARMIL2Q6F5E8 1435 aa9.47□□□□□ -0.89
NUP98-208ENST00000461047 LOC105371045A0A1W2PR82 267 aa9.46□□□□□ -0.9
NUP98-208ENST00000461047 TNIKQ9UKE5 1360 aa9.46□□□□□ -0.9
NUP98-208ENST00000461047 RANGAP1P46060 587 aaPredicted RBP9.45□□□□□ -0.9
NUP98-208ENST00000461047 CFAP44Q96MT7 982 aa9.44□□□□□ -0.9
NUP98-208ENST00000461047 CEP170Q5SW79 1584 aa9.44□□□□□ -0.9
NUP98-208ENST00000461047 PRG4Q92954 1404 aaPredicted RBP9.43□□□□□ -0.9
NUP98-208ENST00000461047 MMRN1Q13201 1228 aa9.43□□□□□ -0.9
NUP98-208ENST00000461047 OXER1Q8TDS5 423 aa9.43□□□□□ -0.9
NUP98-208ENST00000461047 IQGAP2Q13576 1575 aa9.42□□□□□ -0.9
NUP98-208ENST00000461047 PBX2P40425 430 aa9.42□□□□□ -0.9
NUP98-208ENST00000461047 PAXIP1Q6ZW49 1069 aaPredicted RBP9.42□□□□□ -0.9
NUP98-208ENST00000461047 CLASP1Q7Z460 1538 aa9.41□□□□□ -0.9
NUP98-208ENST00000461047 MFSD10Q14728 455 aa9.41□□□□□ -0.9
NUP98-208ENST00000461047 ANKRD13DQ6ZTN6 518 aa9.41□□□□□ -0.9
NUP98-208ENST00000461047 MAP3K9P80192 1104 aa9.4□□□□□ -0.9
NUP98-208ENST00000461047 PPP4R3BQ5MIZ7 849 aa9.4□□□□□ -0.9
NUP98-208ENST00000461047 CADPS2Q86UW7 1296 aa9.4□□□□□ -0.9
NUP98-208ENST00000461047 P3H3Q8IVL6 736 aa9.39□□□□□ -0.91
NUP98-208ENST00000461047 KCNH8Q96L42 1107 aa9.39□□□□□ -0.91
NUP98-208ENST00000461047 UGGT2Q9NYU1 1516 aa9.39□□□□□ -0.91
NUP98-208ENST00000461047 TTBK1Q5TCY1 1321 aaPredicted RBP9.38□□□□□ -0.91
NUP98-208ENST00000461047 PTPRGP23470 1445 aa9.38□□□□□ -0.91
NUP98-208ENST00000461047 CLIP1P30622 1438 aa9.38□□□□□ -0.91
NUP98-208ENST00000461047 CTTNBP2Q8WZ74 1663 aa9.37□□□□□ -0.91
NUP98-208ENST00000461047 KDM4FA0A1W2PPD8 638 aa9.37□□□□□ -0.91
NUP98-208ENST00000461047 LSM11P83369 360 aaKnown RBP eCLIP9.37□□□□□ -0.91
NUP98-208ENST00000461047 PTGER2P43116 358 aa9.36□□□□□ -0.91
NUP98-208ENST00000461047 CYB5RLQ6IPT4 315 aa9.36□□□□□ -0.91
NUP98-208ENST00000461047 AXIN2Q9Y2T1 843 aa9.36□□□□□ -0.91
NUP98-208ENST00000461047 EFCAB5A4FU69 1503 aa9.36□□□□□ -0.91
NUP98-208ENST00000461047 ARHGAP33O14559 1287 aa9.35□□□□□ -0.91
NUP98-208ENST00000461047 EVI5O60447 810 aa9.35□□□□□ -0.91
NUP98-208ENST00000461047 SHROOM2Q13796 1616 aa9.34□□□□□ -0.91
NUP98-208ENST00000461047 CEP162Q5TB80 1403 aa9.34□□□□□ -0.91
NUP98-208ENST00000461047 ZNF454Q8N9F8 522 aa9.34□□□□□ -0.91
NUP98-208ENST00000461047 ARHGEF11O15085 1522 aa9.34□□□□□ -0.91
NUP98-208ENST00000461047 FMN1Q68DA7 1419 aa9.33□□□□□ -0.92
NUP98-208ENST00000461047 MYT1LQ9UL68 1186 aa9.33□□□□□ -0.92
NUP98-208ENST00000461047 ATP1B4Q9UN42 357 aaPredicted RBP9.33□□□□□ -0.92
NUP98-208ENST00000461047 DISP1Q96F81 1524 aa9.32□□□□□ -0.92
NUP98-208ENST00000461047 WDR70Q9NW82 654 aa9.32□□□□□ -0.92
NUP98-208ENST00000461047 RNF166Q96A37 237 aaPredicted RBP9.31□□□□□ -0.92
NUP98-208ENST00000461047 EMILIN3Q9NT22 766 aa9.31□□□□□ -0.92
NUP98-208ENST00000461047 KIAA0556O60303 1618 aa9.31□□□□□ -0.92
NUP98-208ENST00000461047 ARHGAP35Q9NRY4 1499 aa9.3□□□□□ -0.92
NUP98-208ENST00000461047 POTEEQ6S8J3 1075 aa9.29□□□□□ -0.92
NUP98-208ENST00000461047 KCNK17Q96T54 332 aa9.29□□□□□ -0.92
NUP98-208ENST00000461047 ANO8Q9HCE9 1232 aaPredicted RBP9.29□□□□□ -0.92
NUP98-208ENST00000461047 CDK11AQ9UQ88 783 aaPredicted RBP9.29□□□□□ -0.92
NUP98-208ENST00000461047 FHOD3Q2V2M9 1422 aa9.29□□□□□ -0.92
NUP98-208ENST00000461047 UACAQ9BZF9 1416 aa9.29□□□□□ -0.92
NUP98-208ENST00000461047 RIMBP3CA6NJZ7 1639 aa9.28□□□□□ -0.92
NUP98-208ENST00000461047 RIMBP3BA6NNM3 1639 aa9.28□□□□□ -0.92
NUP98-208ENST00000461047 RIMBP3Q9UFD9 1639 aa9.28□□□□□ -0.92
NUP98-208ENST00000461047 PSEN2P49810 448 aa9.28□□□□□ -0.92
NUP98-208ENST00000461047 FOSBP53539 338 aa9.28□□□□□ -0.92
NUP98-208ENST00000461047 STAC3Q96MF2 364 aa9.28□□□□□ -0.92
NUP98-208ENST00000461047 SAMD9Q5K651 1589 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms