RNA–Protein interactions for RNA: ENST00000460962.5

GCOM1-203, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 3,156 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-203ENST00000460962 ERCC6Q03468 1493 aa16.27■□□□□ 0.19
GCOM1-203ENST00000460962 ATP10BO94823 1461 aa16.26■□□□□ 0.19
GCOM1-203ENST00000460962 ABCA8O94911 1581 aa16.26■□□□□ 0.19
GCOM1-203ENST00000460962 LRPPRCP42704 1394 aaKnown RBP16.25■□□□□ 0.19
GCOM1-203ENST00000460962 HNRNPMP52272 730 aaKnown RBP eCLIP16.25■□□□□ 0.19
GCOM1-203ENST00000460962 PTPRGP23470 1445 aa16.24■□□□□ 0.19
GCOM1-203ENST00000460962 MYT1LQ9UL68 1186 aa16.24■□□□□ 0.19
GCOM1-203ENST00000460962 NOP58Q9Y2X3 529 aaKnown RBP16.24■□□□□ 0.19
GCOM1-203ENST00000460962 ARHGEF5Q12774 1597 aa16.21■□□□□ 0.19
GCOM1-203ENST00000460962 ANP32AP39687 249 aaKnown RBP16.2■□□□□ 0.18
GCOM1-203ENST00000460962 E9PCH4 1651 aa16.2■□□□□ 0.18
GCOM1-203ENST00000460962 FAM135AQ9P2D6 1515 aa16.19■□□□□ 0.18
GCOM1-203ENST00000460962 NLRP13Q86W25 1043 aa16.19■□□□□ 0.18
GCOM1-203ENST00000460962 CCDC141Q6ZP82 1450 aa16.19■□□□□ 0.18
GCOM1-203ENST00000460962 CCDC144AA2RUR9 1427 aa16.18■□□□□ 0.18
GCOM1-203ENST00000460962 RRP1P56182 461 aaKnown RBP16.18■□□□□ 0.18
GCOM1-203ENST00000460962 PRAG1Q86YV5 1406 aa16.17■□□□□ 0.18
GCOM1-203ENST00000460962 SALL2Q9Y467 1007 aaPredicted RBP16.16■□□□□ 0.18
GCOM1-203ENST00000460962 PAK3O75914 559 aaPredicted RBP16.16■□□□□ 0.18
GCOM1-203ENST00000460962 RGL3Q3MIN7 710 aa16.16■□□□□ 0.18
GCOM1-203ENST00000460962 RCAN3Q9UKA8 241 aa16.16■□□□□ 0.18
GCOM1-203ENST00000460962 PARD3Q8TEW0 1356 aa16.15■□□□□ 0.18
GCOM1-203ENST00000460962 RSPH4AQ5TD94 716 aa16.15■□□□□ 0.18
GCOM1-203ENST00000460962 TRPM1Q7Z4N2 1603 aa16.14■□□□□ 0.18
GCOM1-203ENST00000460962 SAMD9LQ8IVG5 1584 aa16.14■□□□□ 0.17
GCOM1-203ENST00000460962 IPO9Q96P70 1041 aaKnown RBP16.14■□□□□ 0.17
GCOM1-203ENST00000460962 PDE3BQ13370 1112 aa16.14■□□□□ 0.17
GCOM1-203ENST00000460962 NBPF1Q3BBV0 1214 aa16.13■□□□□ 0.17
GCOM1-203ENST00000460962 EXOC6Q8TAG9 804 aa16.13■□□□□ 0.17
GCOM1-203ENST00000460962 PREX2Q70Z35 1606 aa16.12■□□□□ 0.17
GCOM1-203ENST00000460962 NBR1Q14596 966 aa16.12■□□□□ 0.17
GCOM1-203ENST00000460962 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.12■□□□□ 0.17
GCOM1-203ENST00000460962 CDC42BPBQ9Y5S2 1711 aa16.11■□□□□ 0.17
GCOM1-203ENST00000460962 PER1O15534 1290 aaPredicted RBP16.1■□□□□ 0.17
GCOM1-203ENST00000460962 DEKP35659 375 aaKnown RBP16.1■□□□□ 0.17
GCOM1-203ENST00000460962 ZBTB47Q9UFB7 747 aaPredicted RBP16.1■□□□□ 0.17
GCOM1-203ENST00000460962 GPRASP1Q5JY77 1395 aa16.1■□□□□ 0.17
GCOM1-203ENST00000460962 A2MP01023 1474 aa16.09■□□□□ 0.17
GCOM1-203ENST00000460962 COL17A1Q9UMD9 1497 aaPredicted RBP16.09■□□□□ 0.17
GCOM1-203ENST00000460962 CC2D1BQ5T0F9 858 aaKnown RBP16.09■□□□□ 0.17
GCOM1-203ENST00000460962 SYCP2Q9BX26 1530 aa16.09■□□□□ 0.17
GCOM1-203ENST00000460962 WASHC2CQ9Y4E1 1318 aa16.08■□□□□ 0.17
GCOM1-203ENST00000460962 PLA2R1Q13018 1463 aa16.08■□□□□ 0.16
GCOM1-203ENST00000460962 UNC13BO14795 1591 aa16.07■□□□□ 0.16
GCOM1-203ENST00000460962 TCERG1O14776 1098 aaKnown RBP16.07■□□□□ 0.16
GCOM1-203ENST00000460962 DISP3Q9P2K9 1392 aa16.07■□□□□ 0.16
GCOM1-203ENST00000460962 ARHGAP5Q13017 1502 aa16.07■□□□□ 0.16
GCOM1-203ENST00000460962 TESK2Q96S53 571 aa16.06■□□□□ 0.16
GCOM1-203ENST00000460962 CDCA7LQ96GN5 454 aa16.06■□□□□ 0.16
GCOM1-203ENST00000460962 PRDM15P57071 1507 aaPredicted RBP16.06■□□□□ 0.16
GCOM1-203ENST00000460962 LAMC1P11047 1609 aa16.05■□□□□ 0.16
GCOM1-203ENST00000460962 PANK3Q9H999 370 aa16.05■□□□□ 0.16
GCOM1-203ENST00000460962 ERBINQ96RT1 1412 aa16.05■□□□□ 0.16
GCOM1-203ENST00000460962 MAST1Q9Y2H9 1570 aa16.05■□□□□ 0.16
GCOM1-203ENST00000460962 TMF1P82094 1093 aa16.04■□□□□ 0.16
GCOM1-203ENST00000460962 EIF2AK4Q9P2K8 1649 aaKnown RBP16.04■□□□□ 0.16
GCOM1-203ENST00000460962 NPM2Q86SE8 214 aaKnown RBP16.03■□□□□ 0.16
GCOM1-203ENST00000460962 PLEKHH2Q8IVE3 1493 aa16.02■□□□□ 0.16
GCOM1-203ENST00000460962 INSRP06213 1382 aa16.02■□□□□ 0.16
GCOM1-203ENST00000460962 RTL5Q5HYW3 569 aaPredicted RBP16.02■□□□□ 0.16
GCOM1-203ENST00000460962 BLMP54132 1417 aaPredicted RBP16.02■□□□□ 0.16
GCOM1-203ENST00000460962 TTC37Q6PGP7 1564 aa16.02■□□□□ 0.16
GCOM1-203ENST00000460962 IQGAP3Q86VI3 1631 aa16.02■□□□□ 0.15
GCOM1-203ENST00000460962 MYO5CQ9NQX4 1742 aa16.02■□□□□ 0.15
GCOM1-203ENST00000460962 ZMYM4Q5VZL5 1548 aa16.01■□□□□ 0.15
GCOM1-203ENST00000460962 PDE4AP27815 886 aa16.01■□□□□ 0.15
GCOM1-203ENST00000460962 PLXNC1O60486 1568 aa16■□□□□ 0.15
GCOM1-203ENST00000460962 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16■□□□□ 0.15
GCOM1-203ENST00000460962 PLIN1O60240 522 aa15.99■□□□□ 0.15
GCOM1-203ENST00000460962 MS4A1P11836 297 aa15.99■□□□□ 0.15
GCOM1-203ENST00000460962 ATP10AO60312 1499 aa15.98■□□□□ 0.15
GCOM1-203ENST00000460962 DUOX2Q9NRD8 1548 aa15.98■□□□□ 0.15
GCOM1-203ENST00000460962 BACH2Q9BYV9 841 aa15.97■□□□□ 0.15
GCOM1-203ENST00000460962 CRBNQ96SW2 442 aa15.96■□□□□ 0.15
GCOM1-203ENST00000460962 MAGI2Q86UL8 1455 aa15.95■□□□□ 0.14
GCOM1-203ENST00000460962 ADAMTS8Q9UP79 889 aa15.94■□□□□ 0.14
GCOM1-203ENST00000460962 KNSTRNQ9Y448 316 aa15.94■□□□□ 0.14
GCOM1-203ENST00000460962 RNF17Q9BXT8 1623 aaKnown RBP15.93■□□□□ 0.14
GCOM1-203ENST00000460962 WDR43Q15061 677 aaKnown RBP eCLIP15.93■□□□□ 0.14
GCOM1-203ENST00000460962 WDR7Q9Y4E6 1490 aa15.91■□□□□ 0.14
GCOM1-203ENST00000460962 ABCC2Q92887 1545 aa15.9■□□□□ 0.14
GCOM1-203ENST00000460962 PPP2R1AP30153 589 aa15.9■□□□□ 0.14
GCOM1-203ENST00000460962 CDCA8Q53HL2 280 aa15.89■□□□□ 0.13
GCOM1-203ENST00000460962 EFCAB2Q5VUJ9 269 aa15.89■□□□□ 0.13
GCOM1-203ENST00000460962 CHD1O14646 1710 aa15.88■□□□□ 0.13
GCOM1-203ENST00000460962 C20orf194Q5TEA3 1177 aa15.88■□□□□ 0.13
GCOM1-203ENST00000460962 PLCH2O75038 1416 aa15.88■□□□□ 0.13
GCOM1-203ENST00000460962 SKAP1Q86WV1 359 aa15.87■□□□□ 0.13
GCOM1-203ENST00000460962 LAS1LQ9Y4W2 734 aaKnown RBP15.87■□□□□ 0.13
GCOM1-203ENST00000460962 MADDQ8WXG6 1647 aa15.87■□□□□ 0.13
GCOM1-203ENST00000460962 PLEKHH1Q9ULM0 1364 aa15.87■□□□□ 0.13
GCOM1-203ENST00000460962 AMER1Q5JTC6 1135 aaPredicted RBP15.87■□□□□ 0.13
GCOM1-203ENST00000460962 SHROOM2Q13796 1616 aa15.86■□□□□ 0.13
GCOM1-203ENST00000460962 DUSP27Q5VZP5 1158 aa15.86■□□□□ 0.13
GCOM1-203ENST00000460962 IQGAP1P46940 1657 aa15.86■□□□□ 0.13
GCOM1-203ENST00000460962 GOLGA2Q08379 1002 aa15.86■□□□□ 0.13
GCOM1-203ENST00000460962 SCAF11Q99590 1463 aaKnown RBP15.85■□□□□ 0.13
GCOM1-203ENST00000460962 SYNMO15061 1565 aa15.85■□□□□ 0.13
GCOM1-203ENST00000460962 NEFMP07197 916 aa15.85■□□□□ 0.13
GCOM1-203ENST00000460962 DDRGK1Q96HY6 314 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms