RNA–Protein interactions for RNA: ENST00000460004.1

USP34-206, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 4

Gene USP34, Length 572 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-206ENST00000460004 DNAJC5Q9H3Z4 198 aa11.85□□□□□ -0.51
USP34-206ENST00000460004 VARS2Q5ST30 1063 aaKnown RBP11.84□□□□□ -0.51
USP34-206ENST00000460004 EIF4G3O43432 1585 aaKnown RBP11.84□□□□□ -0.51
USP34-206ENST00000460004 SPNS2Q8IVW8 549 aa11.82□□□□□ -0.52
USP34-206ENST00000460004 FHAD1B1AJZ9 1412 aa11.82□□□□□ -0.52
USP34-206ENST00000460004 AQRO60306 1485 aaKnown RBP eCLIP11.81□□□□□ -0.52
USP34-206ENST00000460004 ADAMTS12P58397 1594 aa11.8□□□□□ -0.52
USP34-206ENST00000460004 MAGI1Q96QZ7 1491 aaPredicted RBP11.8□□□□□ -0.52
USP34-206ENST00000460004 CTTNBP2Q8WZ74 1663 aa11.8□□□□□ -0.52
USP34-206ENST00000460004 ZNF608Q9ULD9 1512 aaPredicted RBP11.8□□□□□ -0.52
USP34-206ENST00000460004 CLIP1P30622 1438 aa11.79□□□□□ -0.52
USP34-206ENST00000460004 NUDT7P0C024 238 aa11.77□□□□□ -0.53
USP34-206ENST00000460004 MMRN1Q13201 1228 aa11.76□□□□□ -0.53
USP34-206ENST00000460004 RYDENQ9NUL5 291 aaKnown RBP11.75□□□□□ -0.53
USP34-206ENST00000460004 PCDHGA4Q9Y5G9 962 aa11.75□□□□□ -0.53
USP34-206ENST00000460004 ZNF316A6NFI3 1004 aaPredicted RBP11.74□□□□□ -0.53
USP34-206ENST00000460004 SLC34A2O95436 690 aa11.74□□□□□ -0.53
USP34-206ENST00000460004 GPHNQ9NQX3 736 aaPredicted RBP11.74□□□□□ -0.53
USP34-206ENST00000460004 SNAPC4Q5SXM2 1469 aa11.74□□□□□ -0.53
USP34-206ENST00000460004 EFCAB5A4FU69 1503 aa11.73□□□□□ -0.53
USP34-206ENST00000460004 SYNJ2O15056 1496 aa11.73□□□□□ -0.53
USP34-206ENST00000460004 GTPBP6O43824 516 aaPredicted RBP11.73□□□□□ -0.53
USP34-206ENST00000460004 DSG2Q14126 1118 aa11.73□□□□□ -0.53
USP34-206ENST00000460004 PLPP6Q8IY26 295 aa11.73□□□□□ -0.53
USP34-206ENST00000460004 ZNF687Q8N1G0 1237 aa11.73□□□□□ -0.53
USP34-206ENST00000460004 FOXK1P85037 733 aa11.72□□□□□ -0.53
USP34-206ENST00000460004 VPS8Q8N3P4 1428 aa11.7□□□□□ -0.54
USP34-206ENST00000460004 GRIN2AQ12879 1464 aa11.7□□□□□ -0.54
USP34-206ENST00000460004 LHX6Q9UPM6 363 aa11.69□□□□□ -0.54
USP34-206ENST00000460004 IQGAP2Q13576 1575 aa11.68□□□□□ -0.54
USP34-206ENST00000460004 CHMP7Q8WUX9 453 aaPredicted RBP11.67□□□□□ -0.54
USP34-206ENST00000460004 ARHGAP35Q9NRY4 1499 aa11.67□□□□□ -0.54
USP34-206ENST00000460004 KIAA0586Q9BVV6 1533 aa11.65□□□□□ -0.54
USP34-206ENST00000460004 ARAP1Q96P48 1450 aa11.65□□□□□ -0.54
USP34-206ENST00000460004 PTCD2Q8WV60 388 aaKnown RBP11.65□□□□□ -0.54
USP34-206ENST00000460004 CRISPLD2Q9H0B8 497 aa11.65□□□□□ -0.54
USP34-206ENST00000460004 SAMD9Q5K651 1589 aa11.64□□□□□ -0.55
USP34-206ENST00000460004 NCKAP5LQ9HCH0 1330 aa11.63□□□□□ -0.55
USP34-206ENST00000460004 RANGAP1P46060 587 aaPredicted RBP11.63□□□□□ -0.55
USP34-206ENST00000460004 NUP160Q12769 1436 aa11.61□□□□□ -0.55
USP34-206ENST00000460004 FMN1Q68DA7 1419 aa11.61□□□□□ -0.55
USP34-206ENST00000460004 UGGT2Q9NYU1 1516 aa11.61□□□□□ -0.55
USP34-206ENST00000460004 KDM4FA0A1W2PPD8 638 aa11.6□□□□□ -0.55
USP34-206ENST00000460004 PPP1R15BQ5SWA1 713 aa11.6□□□□□ -0.55
USP34-206ENST00000460004 UPF1Q92900 1129 aaKnown RBP eCLIP11.6□□□□□ -0.55
USP34-206ENST00000460004 CEP170Q5SW79 1584 aa11.59□□□□□ -0.55
USP34-206ENST00000460004 PDE4AP27815 886 aa11.59□□□□□ -0.55
USP34-206ENST00000460004 ANKRD13DQ6ZTN6 518 aa11.59□□□□□ -0.55
USP34-206ENST00000460004 RTN4Q9NQC3 1192 aaKnown RBP11.59□□□□□ -0.55
USP34-206ENST00000460004 CHD1O14646 1710 aa11.58□□□□□ -0.56
USP34-206ENST00000460004 AMER1Q5JTC6 1135 aaPredicted RBP11.58□□□□□ -0.56
USP34-206ENST00000460004 POTEEQ6S8J3 1075 aa11.58□□□□□ -0.56
USP34-206ENST00000460004 AXIN2Q9Y2T1 843 aa11.58□□□□□ -0.56
USP34-206ENST00000460004 MAP3K1Q13233 1512 aa11.57□□□□□ -0.56
USP34-206ENST00000460004 LARP6Q9BRS8 491 aaKnown RBP11.57□□□□□ -0.56
USP34-206ENST00000460004 FYCO1Q9BQS8 1478 aa11.57□□□□□ -0.56
USP34-206ENST00000460004 TBC1D12O60347 775 aa11.56□□□□□ -0.56
USP34-206ENST00000460004 TRIM26Q12899 539 aaPredicted RBP11.56□□□□□ -0.56
USP34-206ENST00000460004 CARMIL2Q6F5E8 1435 aa11.55□□□□□ -0.56
USP34-206ENST00000460004 CADPS2Q86UW7 1296 aa11.55□□□□□ -0.56
USP34-206ENST00000460004 OXER1Q8TDS5 423 aa11.55□□□□□ -0.56
USP34-206ENST00000460004 FHOD3Q2V2M9 1422 aa11.54□□□□□ -0.56
USP34-206ENST00000460004 KIAA0556O60303 1618 aa11.54□□□□□ -0.56
USP34-206ENST00000460004 LSM11P83369 360 aaKnown RBP eCLIP11.54□□□□□ -0.56
USP34-206ENST00000460004 CASKIN1Q8WXD9 1431 aa11.53□□□□□ -0.56
USP34-206ENST00000460004 DDX27Q96GQ7 796 aaKnown RBP11.52□□□□□ -0.57
USP34-206ENST00000460004 PCF11O94913 1555 aaKnown RBP11.52□□□□□ -0.57
USP34-206ENST00000460004 PBX2P40425 430 aa11.51□□□□□ -0.57
USP34-206ENST00000460004 BBXQ8WY36 941 aaPredicted RBP11.51□□□□□ -0.57
USP34-206ENST00000460004 DISP1Q96F81 1524 aa11.5□□□□□ -0.57
USP34-206ENST00000460004 CFAP43Q8NDM7 1665 aa11.5□□□□□ -0.57
USP34-206ENST00000460004 PSDA5PKW4 1024 aaPredicted RBP11.5□□□□□ -0.57
USP34-206ENST00000460004 RNF166Q96A37 237 aaPredicted RBP11.5□□□□□ -0.57
USP34-206ENST00000460004 JPH4Q96JJ6 628 aa11.5□□□□□ -0.57
USP34-206ENST00000460004 MYT1LQ9UL68 1186 aa11.5□□□□□ -0.57
USP34-206ENST00000460004 TIAM1Q13009 1591 aa11.5□□□□□ -0.57
USP34-206ENST00000460004 HECW1Q76N89 1606 aa11.49□□□□□ -0.57
USP34-206ENST00000460004 P3H3Q8IVL6 736 aa11.49□□□□□ -0.57
USP34-206ENST00000460004 CCDC18Q5T9S5 1454 aa11.49□□□□□ -0.57
USP34-206ENST00000460004 MFSD10Q14728 455 aa11.48□□□□□ -0.57
USP34-206ENST00000460004 SHROOM2Q13796 1616 aa11.48□□□□□ -0.57
USP34-206ENST00000460004 ARHGAP33O14559 1287 aa11.46□□□□□ -0.57
USP34-206ENST00000460004 PSEN2P49810 448 aa11.46□□□□□ -0.57
USP34-206ENST00000460004 PPP4R3BQ5MIZ7 849 aa11.46□□□□□ -0.57
USP34-206ENST00000460004 CLASP1Q7Z460 1538 aa11.45□□□□□ -0.58
USP34-206ENST00000460004 PCGF6Q9BYE7 350 aa11.44□□□□□ -0.58
USP34-206ENST00000460004 LRRC9Q6ZRR7 1453 aa11.44□□□□□ -0.58
USP34-206ENST00000460004 RAPGEF6Q8TEU7 1601 aa11.43□□□□□ -0.58
USP34-206ENST00000460004 DMRTA1Q5VZB9 504 aa11.43□□□□□ -0.58
USP34-206ENST00000460004 ZNF454Q8N9F8 522 aa11.43□□□□□ -0.58
USP34-206ENST00000460004 EMILIN3Q9NT22 766 aa11.43□□□□□ -0.58
USP34-206ENST00000460004 PRG4Q92954 1404 aaPredicted RBP11.43□□□□□ -0.58
USP34-206ENST00000460004 PTGER2P43116 358 aa11.42□□□□□ -0.58
USP34-206ENST00000460004 ATP1B4Q9UN42 357 aaPredicted RBP11.42□□□□□ -0.58
USP34-206ENST00000460004 EVI5O60447 810 aa11.41□□□□□ -0.58
USP34-206ENST00000460004 MAP3K9P80192 1104 aa11.41□□□□□ -0.58
USP34-206ENST00000460004 ADGRD1Q6QNK2 874 aa11.4□□□□□ -0.58
USP34-206ENST00000460004 PPARGC1BQ86YN6 1023 aaKnown RBP11.4□□□□□ -0.58
USP34-206ENST00000460004 SPRYD3Q8NCJ5 442 aa11.4□□□□□ -0.58
USP34-206ENST00000460004 EPRSP07814 1512 aaKnown RBP11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms