RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 LAMC1P11047 1609 aa8.4□□□□□ -1.06
UBQLN4-202ENST00000459954 RALGAPBQ86X10 1494 aa8.4□□□□□ -1.06
UBQLN4-202ENST00000459954 FANCIQ9NVI1 1328 aa8.4□□□□□ -1.06
UBQLN4-202ENST00000459954 SLC4A1APQ9BWU0 796 aaKnown RBP8.4□□□□□ -1.06
UBQLN4-202ENST00000459954 PPP4R2Q9NY27 417 aa8.4□□□□□ -1.06
UBQLN4-202ENST00000459954 NBPF8Q3BBV2 869 aa8.39□□□□□ -1.07
UBQLN4-202ENST00000459954 MAST1Q9Y2H9 1570 aa8.39□□□□□ -1.07
UBQLN4-202ENST00000459954 ZNF518AQ6AHZ1 1483 aa8.38□□□□□ -1.07
UBQLN4-202ENST00000459954 KIF7Q2M1P5 1343 aa8.38□□□□□ -1.07
UBQLN4-202ENST00000459954 BCANQ96GW7 911 aa8.38□□□□□ -1.07
UBQLN4-202ENST00000459954 ARHGAP5Q13017 1502 aa8.38□□□□□ -1.07
UBQLN4-202ENST00000459954 ADGRL1O94910 1474 aa8.38□□□□□ -1.07
UBQLN4-202ENST00000459954 SMG6Q86US8 1419 aaKnown RBP8.37□□□□□ -1.07
UBQLN4-202ENST00000459954 SCAPERQ9BY12 1400 aa8.37□□□□□ -1.07
UBQLN4-202ENST00000459954 ANKRD50Q9ULJ7 1429 aa8.37□□□□□ -1.07
UBQLN4-202ENST00000459954 CDC42BPBQ9Y5S2 1711 aa8.37□□□□□ -1.07
UBQLN4-202ENST00000459954 PREX2Q70Z35 1606 aa8.37□□□□□ -1.07
UBQLN4-202ENST00000459954 C11orf95C9JLR9 678 aaPredicted RBP8.37□□□□□ -1.07
UBQLN4-202ENST00000459954 MYO5CQ9NQX4 1742 aa8.37□□□□□ -1.07
UBQLN4-202ENST00000459954 PPRC1Q5VV67 1664 aaKnown RBP8.37□□□□□ -1.07
UBQLN4-202ENST00000459954 DHX29Q7Z478 1369 aaKnown RBP8.36□□□□□ -1.07
UBQLN4-202ENST00000459954 TSPY4P0CV99 314 aa8.36□□□□□ -1.07
UBQLN4-202ENST00000459954 TSPY10P0CW01 314 aa8.36□□□□□ -1.07
UBQLN4-202ENST00000459954 PLPPR3Q6T4P5 718 aa8.36□□□□□ -1.07
UBQLN4-202ENST00000459954 TTC37Q6PGP7 1564 aa8.35□□□□□ -1.07
UBQLN4-202ENST00000459954 RNF123Q5XPI4 1314 aa8.35□□□□□ -1.07
UBQLN4-202ENST00000459954 ZNF644Q9H582 1327 aaPredicted RBP8.35□□□□□ -1.07
UBQLN4-202ENST00000459954 ZMYM4Q5VZL5 1548 aa8.35□□□□□ -1.07
UBQLN4-202ENST00000459954 TSPOAP1O95153 1857 aa8.35□□□□□ -1.07
UBQLN4-202ENST00000459954 MRS2Q9HD23 443 aa8.35□□□□□ -1.07
UBQLN4-202ENST00000459954 PPP6R1Q9UPN7 881 aa8.35□□□□□ -1.07
UBQLN4-202ENST00000459954 TRPM1Q7Z4N2 1603 aa8.35□□□□□ -1.07
UBQLN4-202ENST00000459954 RTEL1-TNFRSF6BF6WH68 1400 aa8.35□□□□□ -1.07
UBQLN4-202ENST00000459954 POGZQ7Z3K3 1410 aa8.35□□□□□ -1.07
UBQLN4-202ENST00000459954 UNC13BO14795 1591 aa8.35□□□□□ -1.07
UBQLN4-202ENST00000459954 USP47Q96K76 1375 aa8.35□□□□□ -1.07
UBQLN4-202ENST00000459954 MLH3Q9UHC1 1453 aa8.34□□□□□ -1.07
UBQLN4-202ENST00000459954 RAPGEF3O95398 923 aa8.34□□□□□ -1.07
UBQLN4-202ENST00000459954 C9orf84Q5VXU9 1444 aa8.34□□□□□ -1.07
UBQLN4-202ENST00000459954 INSRP06213 1382 aa8.34□□□□□ -1.07
UBQLN4-202ENST00000459954 COL17A1Q9UMD9 1497 aaPredicted RBP8.33□□□□□ -1.08
UBQLN4-202ENST00000459954 PLXNC1O60486 1568 aa8.33□□□□□ -1.08
UBQLN4-202ENST00000459954 MYT1LQ9UL68 1186 aa8.33□□□□□ -1.08
UBQLN4-202ENST00000459954 EIF2AK4Q9P2K8 1649 aaKnown RBP8.32□□□□□ -1.08
UBQLN4-202ENST00000459954 SPAG9O60271 1321 aaKnown RBP8.32□□□□□ -1.08
UBQLN4-202ENST00000459954 PKD2Q13563 968 aa8.32□□□□□ -1.08
UBQLN4-202ENST00000459954 ZNF777Q9ULD5 760 aaPredicted RBP8.32□□□□□ -1.08
UBQLN4-202ENST00000459954 KIF15Q9NS87 1388 aa8.32□□□□□ -1.08
UBQLN4-202ENST00000459954 IQGAP3Q86VI3 1631 aa8.32□□□□□ -1.08
UBQLN4-202ENST00000459954 CCDC184Q52MB2 194 aa8.31□□□□□ -1.08
UBQLN4-202ENST00000459954 AFAP1Q8N556 730 aa8.31□□□□□ -1.08
UBQLN4-202ENST00000459954 BRD4O60885 1362 aaPredicted RBP8.31□□□□□ -1.08
UBQLN4-202ENST00000459954 LRPPRCP42704 1394 aaKnown RBP8.31□□□□□ -1.08
UBQLN4-202ENST00000459954 CCDC141Q6ZP82 1450 aa8.31□□□□□ -1.08
UBQLN4-202ENST00000459954 SAMD9LQ8IVG5 1584 aa8.31□□□□□ -1.08
UBQLN4-202ENST00000459954 WASHC2CQ9Y4E1 1318 aa8.3□□□□□ -1.08
UBQLN4-202ENST00000459954 ABCC1P33527 1531 aa8.3□□□□□ -1.08
UBQLN4-202ENST00000459954 HNRNPMP52272 730 aaKnown RBP eCLIP8.3□□□□□ -1.08
UBQLN4-202ENST00000459954 RALBP1Q15311 655 aa8.3□□□□□ -1.08
UBQLN4-202ENST00000459954 NUDCQ9Y266 331 aa8.3□□□□□ -1.08
UBQLN4-202ENST00000459954 ATP10AO60312 1499 aa8.3□□□□□ -1.08
UBQLN4-202ENST00000459954 FAM135AQ9P2D6 1515 aa8.29□□□□□ -1.08
UBQLN4-202ENST00000459954 FAM9BQ8IZU0 186 aa8.29□□□□□ -1.08
UBQLN4-202ENST00000459954 NUP155O75694 1391 aa8.29□□□□□ -1.08
UBQLN4-202ENST00000459954 GPRASP1Q5JY77 1395 aa8.29□□□□□ -1.08
UBQLN4-202ENST00000459954 ERICH6Q7L0X2 663 aa8.28□□□□□ -1.08
UBQLN4-202ENST00000459954 PNISRQ8TF01 805 aaKnown RBP8.28□□□□□ -1.08
UBQLN4-202ENST00000459954 PRDM15P57071 1507 aaPredicted RBP8.28□□□□□ -1.08
UBQLN4-202ENST00000459954 REREQ9P2R6 1566 aa8.27□□□□□ -1.09
UBQLN4-202ENST00000459954 RICTORQ6R327 1708 aa8.27□□□□□ -1.09
UBQLN4-202ENST00000459954 RNF17Q9BXT8 1623 aaKnown RBP8.27□□□□□ -1.09
UBQLN4-202ENST00000459954 ZFYVE16Q7Z3T8 1539 aa8.27□□□□□ -1.09
UBQLN4-202ENST00000459954 TRAPPC8Q9Y2L5 1435 aa8.27□□□□□ -1.09
UBQLN4-202ENST00000459954 MYBBP1AQ9BQG0 1328 aaKnown RBP8.27□□□□□ -1.09
UBQLN4-202ENST00000459954 AGLP35573 1532 aa8.26□□□□□ -1.09
UBQLN4-202ENST00000459954 DUOX2Q9NRD8 1548 aa8.26□□□□□ -1.09
UBQLN4-202ENST00000459954 PDE3BQ13370 1112 aa8.26□□□□□ -1.09
UBQLN4-202ENST00000459954 PRAG1Q86YV5 1406 aa8.26□□□□□ -1.09
UBQLN4-202ENST00000459954 HECW2Q9P2P5 1572 aa8.26□□□□□ -1.09
UBQLN4-202ENST00000459954 KIAA1210Q9ULL0 1709 aa8.26□□□□□ -1.09
UBQLN4-202ENST00000459954 ARHGEF40Q8TER5 1519 aa8.25□□□□□ -1.09
UBQLN4-202ENST00000459954 SYCP2Q9BX26 1530 aa8.25□□□□□ -1.09
UBQLN4-202ENST00000459954 STAC3Q96MF2 364 aa8.25□□□□□ -1.09
UBQLN4-202ENST00000459954 CARD11Q9BXL7 1154 aa8.25□□□□□ -1.09
UBQLN4-202ENST00000459954 ESF1Q9H501 851 aaKnown RBP8.25□□□□□ -1.09
UBQLN4-202ENST00000459954 DAXXQ9UER7 740 aaPredicted RBP8.25□□□□□ -1.09
UBQLN4-202ENST00000459954 NEURL4Q96JN8 1562 aa8.25□□□□□ -1.09
UBQLN4-202ENST00000459954 CEP152O94986 1710 aa8.25□□□□□ -1.09
UBQLN4-202ENST00000459954 PARD3Q8TEW0 1356 aa8.24□□□□□ -1.09
UBQLN4-202ENST00000459954 FRMPD1Q5SYB0 1578 aa8.24□□□□□ -1.09
UBQLN4-202ENST00000459954 MSH5O43196 834 aa8.24□□□□□ -1.09
UBQLN4-202ENST00000459954 TMC1Q8TDI8 760 aa8.24□□□□□ -1.09
UBQLN4-202ENST00000459954 IQGAP1P46940 1657 aa8.24□□□□□ -1.09
UBQLN4-202ENST00000459954 SPHKAPQ2M3C7 1700 aa8.23□□□□□ -1.09
UBQLN4-202ENST00000459954 CCDC144AA2RUR9 1427 aa8.23□□□□□ -1.09
UBQLN4-202ENST00000459954 ERBINQ96RT1 1412 aa8.23□□□□□ -1.09
UBQLN4-202ENST00000459954 ATP7AQ04656 1500 aa8.23□□□□□ -1.09
UBQLN4-202ENST00000459954 A2MP01023 1474 aa8.22□□□□□ -1.09
UBQLN4-202ENST00000459954 YEATS2Q9ULM3 1422 aa8.21□□□□□ -1.09
UBQLN4-202ENST00000459954 ST20-MTHFSA0A0A6YYL1 179 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms