RNA–Protein interactions for RNA: ENST00000457628.1

LINC01053-201, Transcript of long intergenic non-protein coding RNA 1053, humanhuman

TSL 2 BASIC

Gene LINC01053, Length 771 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01053-201ENST00000457628 TRAPPC8Q9Y2L5 1435 aa12.18□□□□□ -0.46
LINC01053-201ENST00000457628 MED1Q15648 1581 aaPredicted RBP12.18□□□□□ -0.46
LINC01053-201ENST00000457628 ARHGAP35Q9NRY4 1499 aa12.17□□□□□ -0.46
LINC01053-201ENST00000457628 CD44P16070 742 aaKnown RBP12.17□□□□□ -0.46
LINC01053-201ENST00000457628 RANGAP1P46060 587 aaPredicted RBP12.17□□□□□ -0.46
LINC01053-201ENST00000457628 NCOA1Q15788 1441 aa12.17□□□□□ -0.46
LINC01053-201ENST00000457628 TSPYL2Q9H2G4 693 aaPredicted RBP12.16□□□□□ -0.46
LINC01053-201ENST00000457628 CLIP1P30622 1438 aa12.16□□□□□ -0.46
LINC01053-201ENST00000457628 SAMD9Q5K651 1589 aa12.16□□□□□ -0.46
LINC01053-201ENST00000457628 SUPT6HQ7KZ85 1726 aaKnown RBP12.15□□□□□ -0.46
LINC01053-201ENST00000457628 DCAF8Q5TAQ9 597 aa12.15□□□□□ -0.46
LINC01053-201ENST00000457628 FAM212AQ96EL1 285 aa12.15□□□□□ -0.46
LINC01053-201ENST00000457628 NUP153P49790 1475 aaKnown RBP12.14□□□□□ -0.47
LINC01053-201ENST00000457628 PLCH2O75038 1416 aa12.13□□□□□ -0.47
LINC01053-201ENST00000457628 TOM1O60784 492 aa12.13□□□□□ -0.47
LINC01053-201ENST00000457628 EFCAB2Q5VUJ9 269 aa12.13□□□□□ -0.47
LINC01053-201ENST00000457628 MYT1LQ9UL68 1186 aa12.13□□□□□ -0.47
LINC01053-201ENST00000457628 CIZ1Q9ULV3 898 aaPredicted RBP12.13□□□□□ -0.47
LINC01053-201ENST00000457628 CAMSAP1Q5T5Y3 1602 aa12.12□□□□□ -0.47
LINC01053-201ENST00000457628 MYO5CQ9NQX4 1742 aa12.12□□□□□ -0.47
LINC01053-201ENST00000457628 EVX2Q03828 476 aa12.12□□□□□ -0.47
LINC01053-201ENST00000457628 PKD2Q13563 968 aa12.12□□□□□ -0.47
LINC01053-201ENST00000457628 ZNF335Q9H4Z2 1342 aaPredicted RBP12.11□□□□□ -0.47
LINC01053-201ENST00000457628 PAK3O75914 559 aaPredicted RBP12.11□□□□□ -0.47
LINC01053-201ENST00000457628 HSPA1LP34931 641 aa12.11□□□□□ -0.47
LINC01053-201ENST00000457628 ZRANB1Q9UGI0 708 aa12.11□□□□□ -0.47
LINC01053-201ENST00000457628 REREQ9P2R6 1566 aa12.1□□□□□ -0.47
LINC01053-201ENST00000457628 GSE1Q14687 1217 aa12.1□□□□□ -0.47
LINC01053-201ENST00000457628 CNTLNQ9NXG0 1405 aa12.1□□□□□ -0.47
LINC01053-201ENST00000457628 ZNF518AQ6AHZ1 1483 aa12.09□□□□□ -0.47
LINC01053-201ENST00000457628 AGLP35573 1532 aa12.09□□□□□ -0.47
LINC01053-201ENST00000457628 NCKAP5LQ9HCH0 1330 aa12.08□□□□□ -0.48
LINC01053-201ENST00000457628 MROH2AA6NES4 1674 aa12.07□□□□□ -0.48
LINC01053-201ENST00000457628 PIP4K2BP78356 416 aa12.07□□□□□ -0.48
LINC01053-201ENST00000457628 NPATQ14207 1427 aa12.07□□□□□ -0.48
LINC01053-201ENST00000457628 CCDC61Q9Y6R9 512 aa12.07□□□□□ -0.48
LINC01053-201ENST00000457628 AMER1Q5JTC6 1135 aaPredicted RBP12.06□□□□□ -0.48
LINC01053-201ENST00000457628 RTN4Q9NQC3 1192 aaKnown RBP12.06□□□□□ -0.48
LINC01053-201ENST00000457628 KDM5CP41229 1560 aa12.05□□□□□ -0.48
LINC01053-201ENST00000457628 PLA2R1Q13018 1463 aa12.05□□□□□ -0.48
LINC01053-201ENST00000457628 DIP2CQ9Y2E4 1556 aa12.05□□□□□ -0.48
LINC01053-201ENST00000457628 AFAP1Q8N556 730 aa12.04□□□□□ -0.48
LINC01053-201ENST00000457628 ZNF142P52746 1687 aaPredicted RBP12.03□□□□□ -0.48
LINC01053-201ENST00000457628 MLH3Q9UHC1 1453 aa12.02□□□□□ -0.48
LINC01053-201ENST00000457628 CPS1P31327 1500 aa12.02□□□□□ -0.48
LINC01053-201ENST00000457628 CDK11AQ9UQ88 783 aaPredicted RBP12.02□□□□□ -0.49
LINC01053-201ENST00000457628 VPS8Q8N3P4 1428 aa12.02□□□□□ -0.49
LINC01053-201ENST00000457628 PHF12Q96QT6 1004 aa12.01□□□□□ -0.49
LINC01053-201ENST00000457628 PTPRKQ15262 1439 aa12.01□□□□□ -0.49
LINC01053-201ENST00000457628 ABCA6Q8N139 1617 aa12□□□□□ -0.49
LINC01053-201ENST00000457628 PYGBP11216 843 aa12□□□□□ -0.49
LINC01053-201ENST00000457628 ZNF579Q8NAF0 562 aaKnown RBP12□□□□□ -0.49
LINC01053-201ENST00000457628 ZMYM3Q14202 1370 aa12□□□□□ -0.49
LINC01053-201ENST00000457628 TCOF1Q13428 1488 aaKnown RBP12□□□□□ -0.49
LINC01053-201ENST00000457628 ARHGAP5Q13017 1502 aa11.99□□□□□ -0.49
LINC01053-201ENST00000457628 MYO3AQ8NEV4 1616 aa11.98□□□□□ -0.49
LINC01053-201ENST00000457628 POLR1AO95602 1720 aaPredicted RBP11.97□□□□□ -0.49
LINC01053-201ENST00000457628 LRRIQ1Q96JM4 1722 aa11.97□□□□□ -0.49
LINC01053-201ENST00000457628 CEP170BQ9Y4F5 1589 aaPredicted RBP11.97□□□□□ -0.49
LINC01053-201ENST00000457628 ECM2O94769 699 aaPredicted RBP11.97□□□□□ -0.49
LINC01053-201ENST00000457628 FMN1Q68DA7 1419 aa11.96□□□□□ -0.49
LINC01053-201ENST00000457628 CASKIN1Q8WXD9 1431 aa11.96□□□□□ -0.49
LINC01053-201ENST00000457628 CDC42BPBQ9Y5S2 1711 aa11.96□□□□□ -0.49
LINC01053-201ENST00000457628 KIDINS220Q9ULH0 1771 aa11.95□□□□□ -0.5
LINC01053-201ENST00000457628 CLTCQ00610 1675 aaKnown RBP11.95□□□□□ -0.5
LINC01053-201ENST00000457628 KIF12Q96FN5 646 aa11.95□□□□□ -0.5
LINC01053-201ENST00000457628 KIF14Q15058 1648 aa11.95□□□□□ -0.5
LINC01053-201ENST00000457628 CDK13Q14004 1512 aaKnown RBP11.95□□□□□ -0.5
LINC01053-201ENST00000457628 SHANK2Q9UPX8 1470 aa11.95□□□□□ -0.5
LINC01053-201ENST00000457628 CHRM1P11229 460 aaPredicted RBP11.94□□□□□ -0.5
LINC01053-201ENST00000457628 FYCO1Q9BQS8 1478 aa11.94□□□□□ -0.5
LINC01053-201ENST00000457628 ITSN2Q9NZM3 1697 aa11.94□□□□□ -0.5
LINC01053-201ENST00000457628 MAP3K13O43283 966 aa11.92□□□□□ -0.5
LINC01053-201ENST00000457628 RGS17Q9UGC6 210 aaPredicted RBP11.91□□□□□ -0.5
LINC01053-201ENST00000457628 ATP1B4Q9UN42 357 aaPredicted RBP11.91□□□□□ -0.5
LINC01053-201ENST00000457628 DNMT1P26358 1616 aaKnown RBP11.9□□□□□ -0.5
LINC01053-201ENST00000457628 A2ML1A8K2U0 1454 aa11.89□□□□□ -0.51
LINC01053-201ENST00000457628 TROQ12816 1431 aaPredicted RBP11.88□□□□□ -0.51
LINC01053-201ENST00000457628 ABCC1P33527 1531 aa11.88□□□□□ -0.51
LINC01053-201ENST00000457628 ANKLE2Q86XL3 938 aa11.88□□□□□ -0.51
LINC01053-201ENST00000457628 SP7Q8TDD2 431 aaPredicted RBP11.88□□□□□ -0.51
LINC01053-201ENST00000457628 PCDHB13Q9Y5F0 798 aa11.88□□□□□ -0.51
LINC01053-201ENST00000457628 TIAM1Q13009 1591 aa11.88□□□□□ -0.51
LINC01053-201ENST00000457628 PREX2Q70Z35 1606 aa11.87□□□□□ -0.51
LINC01053-201ENST00000457628 RGL2O15211 777 aa11.87□□□□□ -0.51
LINC01053-201ENST00000457628 KANK4Q5T7N3 995 aaPredicted RBP11.87□□□□□ -0.51
LINC01053-201ENST00000457628 GABBR2O75899 941 aa11.86□□□□□ -0.51
LINC01053-201ENST00000457628 PPARGC1BQ86YN6 1023 aaKnown RBP11.86□□□□□ -0.51
LINC01053-201ENST00000457628 RNF25Q96BH1 459 aaPredicted RBP11.86□□□□□ -0.51
LINC01053-201ENST00000457628 MS4A3Q96HJ5 214 aa11.86□□□□□ -0.51
LINC01053-201ENST00000457628 ALKQ9UM73 1620 aa11.86□□□□□ -0.51
LINC01053-201ENST00000457628 MAP3K1Q13233 1512 aa11.86□□□□□ -0.51
LINC01053-201ENST00000457628 NEURL4Q96JN8 1562 aa11.85□□□□□ -0.51
LINC01053-201ENST00000457628 SGIP1Q9BQI5 828 aa11.85□□□□□ -0.51
LINC01053-201ENST00000457628 PCDHB8Q9UN66 801 aa11.85□□□□□ -0.51
LINC01053-201ENST00000457628 VWDEQ8N2E2 1590 aa11.84□□□□□ -0.51
LINC01053-201ENST00000457628 GALR2O43603 387 aaPredicted RBP11.84□□□□□ -0.51
LINC01053-201ENST00000457628 GGT6Q6P531 493 aa11.84□□□□□ -0.51
LINC01053-201ENST00000457628 IFNL1Q8IU54 200 aa11.84□□□□□ -0.51
LINC01053-201ENST00000457628 THEMISQ8N1K5 641 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms