RNA–Protein interactions for RNA: ENST00000456173.6

NEDD4L-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 4,978 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-208ENST00000456173 POGKQ9P215 609 aa15.29■□□□□ 0.04
NEDD4L-208ENST00000456173 SMC4Q9NTJ3 1288 aa15.28■□□□□ 0.04
NEDD4L-208ENST00000456173 GRPEL1Q9HAV7 217 aa15.28■□□□□ 0.04
NEDD4L-208ENST00000456173 CCDC39Q9UFE4 941 aa15.28■□□□□ 0.04
NEDD4L-208ENST00000456173 BCL2L13Q9BXK5 485 aa15.27■□□□□ 0.04
NEDD4L-208ENST00000456173 GPS2Q13227 327 aa15.27■□□□□ 0.03
NEDD4L-208ENST00000456173 DIAPH3Q9NSV4 1193 aa15.27■□□□□ 0.03
NEDD4L-208ENST00000456173 CCDC173Q0VFZ6 552 aa15.26■□□□□ 0.03
NEDD4L-208ENST00000456173 PDCL3Q9H2J4 239 aa15.26■□□□□ 0.03
NEDD4L-208ENST00000456173 WRNQ14191 1432 aaPredicted RBP eCLIP15.26■□□□□ 0.03
NEDD4L-208ENST00000456173 KIF16BQ96L93 1317 aa15.26■□□□□ 0.03
NEDD4L-208ENST00000456173 MORC1Q86VD1 984 aa15.25■□□□□ 0.03
NEDD4L-208ENST00000456173 IFT57Q9NWB7 429 aa15.25■□□□□ 0.03
NEDD4L-208ENST00000456173 TPM4P67936 248 aa15.25■□□□□ 0.03
NEDD4L-208ENST00000456173 MPNDQ8N594 471 aa15.24■□□□□ 0.03
NEDD4L-208ENST00000456173 C22orf23Q9BZE7 217 aa15.24■□□□□ 0.03
NEDD4L-208ENST00000456173 NOM1Q5C9Z4 860 aaKnown RBP15.23■□□□□ 0.03
NEDD4L-208ENST00000456173 CAVIN1Q6NZI2 390 aaKnown RBP15.23■□□□□ 0.03
NEDD4L-208ENST00000456173 AEBP1Q8IUX7 1158 aa15.23■□□□□ 0.03
NEDD4L-208ENST00000456173 MYBBP1AQ9BQG0 1328 aaKnown RBP15.23■□□□□ 0.03
NEDD4L-208ENST00000456173 BBXQ8WY36 941 aaPredicted RBP15.22■□□□□ 0.03
NEDD4L-208ENST00000456173 GOLGA6L19H0YKK7 550 aa15.22■□□□□ 0.03
NEDD4L-208ENST00000456173 CHMP7Q8WUX9 453 aaPredicted RBP15.22■□□□□ 0.03
NEDD4L-208ENST00000456173 WIZO95785 1651 aa15.22■□□□□ 0.03
NEDD4L-208ENST00000456173 HMGN5P82970 282 aaKnown RBP15.22■□□□□ 0.03
NEDD4L-208ENST00000456173 CFDP1Q9UEE9 299 aaPredicted RBP15.22■□□□□ 0.03
NEDD4L-208ENST00000456173 TRIM6-TRIM34B2RNG4 842 aa15.21■□□□□ 0.03
NEDD4L-208ENST00000456173 MPHOSPH9Q99550 1183 aa15.21■□□□□ 0.03
NEDD4L-208ENST00000456173 CCDC88BA6NC98 1476 aa15.21■□□□□ 0.03
NEDD4L-208ENST00000456173 CBX1P83916 185 aa15.21■□□□□ 0.03
NEDD4L-208ENST00000456173 CALRP27797 417 aaKnown RBP15.21■□□□□ 0.03
NEDD4L-208ENST00000456173 CHMP3Q9Y3E7 222 aa15.21■□□□□ 0.03
NEDD4L-208ENST00000456173 U2AF1L5P0DN76 240 aaPredicted RBP15.21■□□□□ 0.02
NEDD4L-208ENST00000456173 U2AF1Q01081 240 aaKnown RBP eCLIP15.21■□□□□ 0.025e-7■■■■□ 23
NEDD4L-208ENST00000456173 PLEKHG5O94827 1062 aa15.2■□□□□ 0.02
NEDD4L-208ENST00000456173 CGNL1Q0VF96 1302 aa15.2■□□□□ 0.02
NEDD4L-208ENST00000456173 BECN2A8MW95 431 aa15.2■□□□□ 0.02
NEDD4L-208ENST00000456173 HSP90B1P14625 803 aaKnown RBP15.2■□□□□ 0.02
NEDD4L-208ENST00000456173 ANKRD45Q5TZF3 282 aa15.2■□□□□ 0.02
NEDD4L-208ENST00000456173 PATL2C9JE40 543 aaKnown RBP15.19■□□□□ 0.02
NEDD4L-208ENST00000456173 AKNAQ7Z591 1439 aa15.19■□□□□ 0.02
NEDD4L-208ENST00000456173 HOMER1Q86YM7 354 aa15.18■□□□□ 0.02
NEDD4L-208ENST00000456173 ERCC6Q03468 1493 aa15.18■□□□□ 0.02
NEDD4L-208ENST00000456173 CGNQ9P2M7 1197 aaKnown RBP15.18■□□□□ 0.02
NEDD4L-208ENST00000456173 ERICH4A6NGS2 130 aa15.17■□□□□ 0.02
NEDD4L-208ENST00000456173 NPHP1O15259 732 aa15.17■□□□□ 0.02
NEDD4L-208ENST00000456173 RRP7AQ9Y3A4 280 aaKnown RBP15.17■□□□□ 0.02
NEDD4L-208ENST00000456173 PKD2Q13563 968 aa15.16■□□□□ 0.02
NEDD4L-208ENST00000456173 KIF15Q9NS87 1388 aa15.16■□□□□ 0.02
NEDD4L-208ENST00000456173 NUCB2P80303 420 aa15.16■□□□□ 0.02
NEDD4L-208ENST00000456173 MCM4P33991 863 aa15.15■□□□□ 0.02
NEDD4L-208ENST00000456173 ZSCAN30Q86W11 494 aa15.15■□□□□ 0.02
NEDD4L-208ENST00000456173 ARGLU1Q9NWB6 273 aaPredicted RBP15.15■□□□□ 0.02
NEDD4L-208ENST00000456173 CWC15Q9P013 229 aaKnown RBP15.15■□□□□ 0.02
NEDD4L-208ENST00000456173 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.15■□□□□ 0.02
NEDD4L-208ENST00000456173 TPM3P06753 285 aa15.13■□□□□ 0.01
NEDD4L-208ENST00000456173 MNS1Q8NEH6 495 aa15.13■□□□□ 0.01
NEDD4L-208ENST00000456173 ROCK2O75116 1388 aaKnown RBP15.13■□□□□ 0.01
NEDD4L-208ENST00000456173 CREBRFQ8IUR6 639 aa15.13■□□□□ 0.01
NEDD4L-208ENST00000456173 ATAD2BQ9ULI0 1458 aa15.13■□□□□ 0.01
NEDD4L-208ENST00000456173 TAF3Q5VWG9 929 aa15.12■□□□□ 0.01
NEDD4L-208ENST00000456173 ATP6V1DQ9Y5K8 247 aa15.12■□□□□ 0.01
NEDD4L-208ENST00000456173 PRPF40AO75400 957 aaKnown RBP15.12■□□□□ 0.01
NEDD4L-208ENST00000456173 ISY1Q9ULR0 285 aaKnown RBP15.12■□□□□ 0.01
NEDD4L-208ENST00000456173 TPD52L1Q16890 204 aaPredicted RBP15.12■□□□□ 0.01
NEDD4L-208ENST00000456173 CDCA7LQ96GN5 454 aa15.12■□□□□ 0.01
NEDD4L-208ENST00000456173 TRERF1Q96PN7 1200 aa15.12■□□□□ 0.01
NEDD4L-208ENST00000456173 PHLDB1Q86UU1 1377 aa15.12■□□□□ 0.01
NEDD4L-208ENST00000456173 PDCL2Q8N4E4 241 aa15.11■□□□□ 0.01
NEDD4L-208ENST00000456173 SKAP1Q86WV1 359 aa15.1■□□□□ 0.01
NEDD4L-208ENST00000456173 ST20-MTHFSA0A0A6YYL1 179 aa15.1■□□□□ 0.01
NEDD4L-208ENST00000456173 E9PSI1 815 aa15.1■□□□□ 0.01
NEDD4L-208ENST00000456173 XPCQ01831 940 aaPredicted RBP15.1■□□□□ 0.01
NEDD4L-208ENST00000456173 APAF1O14727 1248 aa15.09■□□□□ 0.01
NEDD4L-208ENST00000456173 SKIDA1Q1XH10 827 aa15.09■□□□□ 0.01
NEDD4L-208ENST00000456173 ZKSCAN2Q63HK3 967 aa15.09■□□□□ 0.01
NEDD4L-208ENST00000456173 C14orf37Q86TY3 774 aa15.08■□□□□ 0.01
NEDD4L-208ENST00000456173 PANK1Q8TE04 598 aa15.08■□□□□ 0.01
NEDD4L-208ENST00000456173 CHMP4AQ9BY43 222 aa15.08■□□□□ 0.01
NEDD4L-208ENST00000456173 KIF3AQ9Y496 699 aa15.08■□□□□ 0.01
NEDD4L-208ENST00000456173 SPC24Q8NBT2 197 aa15.08■□□□□ 0
NEDD4L-208ENST00000456173 ARHGAP35Q9NRY4 1499 aa15.08■□□□□ 0
NEDD4L-208ENST00000456173 C11orf95C9JLR9 678 aaPredicted RBP15.08■□□□□ 0
NEDD4L-208ENST00000456173 ABCC8Q09428 1581 aa15.08■□□□□ 0
NEDD4L-208ENST00000456173 H0YHG0 523 aa15.07■□□□□ 0
NEDD4L-208ENST00000456173 SF3A1Q15459 793 aaKnown RBP15.07■□□□□ 0
NEDD4L-208ENST00000456173 SMARCA2P51531 1590 aa15.07■□□□□ 0
NEDD4L-208ENST00000456173 HSP90B2PQ58FF3 399 aa15.07■□□□□ 0
NEDD4L-208ENST00000456173 LNPKQ9C0E8 428 aa15.07■□□□□ 0
NEDD4L-208ENST00000456173 TSPY26PQ9H489 355 aa15.07■□□□□ 0
NEDD4L-208ENST00000456173 RILPL2Q969X0 211 aa15.07■□□□□ 0
NEDD4L-208ENST00000456173 GORABQ5T7V8 394 aa15.06■□□□□ 0
NEDD4L-208ENST00000456173 PANK3Q9H999 370 aa15.06■□□□□ 0
NEDD4L-208ENST00000456173 FBXW7Q969H0 707 aa15.06■□□□□ 0
NEDD4L-208ENST00000456173 KIF27Q86VH2 1401 aa15.06■□□□□ 0
NEDD4L-208ENST00000456173 CCDC184Q52MB2 194 aa15.06■□□□□ 0
NEDD4L-208ENST00000456173 WASHC2AQ641Q2 1341 aa15.06■□□□□ 0
NEDD4L-208ENST00000456173 FMN1Q68DA7 1419 aa15.05■□□□□ -0
NEDD4L-208ENST00000456173 DNAJC5BQ9UF47 199 aa15.05■□□□□ -0
NEDD4L-208ENST00000456173 HMMRO75330 724 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms