RNA–Protein interactions for RNA: ENST00000456013.5

PTPN6-204, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

TSL 1 (best) BASIC

Gene PTPN6, Length 2,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-204ENST00000456013 RALBP1Q15311 655 aa23.85■■□□□ 1.41
PTPN6-204ENST00000456013 MYBBP1AQ9BQG0 1328 aaKnown RBP23.85■■□□□ 1.41
PTPN6-204ENST00000456013 CCDC136Q96JN2 1154 aa23.85■■□□□ 1.41
PTPN6-204ENST00000456013 KDM2AQ9Y2K7 1162 aa23.83■■□□□ 1.41
PTPN6-204ENST00000456013 ERCC6Q03468 1493 aa23.83■■□□□ 1.41
PTPN6-204ENST00000456013 DCAF11Q8TEB1 546 aa23.83■■□□□ 1.4
PTPN6-204ENST00000456013 TRPM1Q7Z4N2 1603 aa23.81■■□□□ 1.4
PTPN6-204ENST00000456013 MYT1LQ9UL68 1186 aa23.8■■□□□ 1.4
PTPN6-204ENST00000456013 FAM135AQ9P2D6 1515 aa23.8■■□□□ 1.4
PTPN6-204ENST00000456013 CDC42BPBQ9Y5S2 1711 aa23.79■■□□□ 1.4
PTPN6-204ENST00000456013 HNRNPMP52272 730 aaKnown RBP eCLIP23.79■■□□□ 1.4
PTPN6-204ENST00000456013 CCDC141Q6ZP82 1450 aa23.78■■□□□ 1.4
PTPN6-204ENST00000456013 SAMD9LQ8IVG5 1584 aa23.78■■□□□ 1.4
PTPN6-204ENST00000456013 PREX2Q70Z35 1606 aa23.77■■□□□ 1.4
PTPN6-204ENST00000456013 PRAG1Q86YV5 1406 aa23.75■■□□□ 1.39
PTPN6-204ENST00000456013 NOP58Q9Y2X3 529 aaKnown RBP23.74■■□□□ 1.39
PTPN6-204ENST00000456013 RSPH4AQ5TD94 716 aa23.73■■□□□ 1.39
PTPN6-204ENST00000456013 PARD3Q8TEW0 1356 aa23.73■■□□□ 1.39
PTPN6-204ENST00000456013 SENP3-EIF4A1A0A087X0R7 540 aa23.73■■□□□ 1.39
PTPN6-204ENST00000456013 LAMC1P11047 1609 aa23.72■■□□□ 1.39
PTPN6-204ENST00000456013 UNC13BO14795 1591 aa23.71■■□□□ 1.39
PTPN6-204ENST00000456013 CCDC144AA2RUR9 1427 aa23.71■■□□□ 1.39
PTPN6-204ENST00000456013 NLRP13Q86W25 1043 aa23.71■■□□□ 1.39
PTPN6-204ENST00000456013 MAST1Q9Y2H9 1570 aa23.7■■□□□ 1.38
PTPN6-204ENST00000456013 GPRASP1Q5JY77 1395 aa23.69■■□□□ 1.38
PTPN6-204ENST00000456013 RRP1P56182 461 aaKnown RBP23.69■■□□□ 1.38
PTPN6-204ENST00000456013 PDE3BQ13370 1112 aa23.67■■□□□ 1.38
PTPN6-204ENST00000456013 PRDM15P57071 1507 aaPredicted RBP23.65■■□□□ 1.38
PTPN6-204ENST00000456013 PER1O15534 1290 aaPredicted RBP23.65■■□□□ 1.38
PTPN6-204ENST00000456013 MYO5CQ9NQX4 1742 aa23.65■■□□□ 1.38
PTPN6-204ENST00000456013 PLA2R1Q13018 1463 aa23.65■■□□□ 1.38
PTPN6-204ENST00000456013 COL17A1Q9UMD9 1497 aaPredicted RBP23.65■■□□□ 1.38
PTPN6-204ENST00000456013 ANP32AP39687 249 aaKnown RBP23.65■■□□□ 1.38
PTPN6-204ENST00000456013 A2MP01023 1474 aa23.64■■□□□ 1.38
PTPN6-204ENST00000456013 RCAN3Q9UKA8 241 aa23.64■■□□□ 1.37
PTPN6-204ENST00000456013 WASHC2CQ9Y4E1 1318 aa23.63■■□□□ 1.37
PTPN6-204ENST00000456013 PAK3O75914 559 aaPredicted RBP23.63■■□□□ 1.37
PTPN6-204ENST00000456013 IPO9Q96P70 1041 aaKnown RBP23.63■■□□□ 1.37
PTPN6-204ENST00000456013 SYCP2Q9BX26 1530 aa23.63■■□□□ 1.37
PTPN6-204ENST00000456013 IQGAP3Q86VI3 1631 aa23.63■■□□□ 1.37
PTPN6-204ENST00000456013 EIF2AK4Q9P2K8 1649 aaKnown RBP23.62■■□□□ 1.37
PTPN6-204ENST00000456013 INSRP06213 1382 aa23.62■■□□□ 1.37
PTPN6-204ENST00000456013 NBPF1Q3BBV0 1214 aa23.62■■□□□ 1.37
PTPN6-204ENST00000456013 ZMYM4Q5VZL5 1548 aa23.61■■□□□ 1.37
PTPN6-204ENST00000456013 PLXNC1O60486 1568 aa23.61■■□□□ 1.37
PTPN6-204ENST00000456013 EXOC6Q8TAG9 804 aa23.59■■□□□ 1.37
PTPN6-204ENST00000456013 RGL3Q3MIN7 710 aa23.59■■□□□ 1.37
PTPN6-204ENST00000456013 TTC37Q6PGP7 1564 aa23.58■■□□□ 1.36
PTPN6-204ENST00000456013 ARHGAP5Q13017 1502 aa23.57■■□□□ 1.36
PTPN6-204ENST00000456013 TESK2Q96S53 571 aa23.57■■□□□ 1.36
PTPN6-204ENST00000456013 DISP3Q9P2K9 1392 aa23.56■■□□□ 1.36
PTPN6-204ENST00000456013 BLMP54132 1417 aaPredicted RBP23.56■■□□□ 1.36
PTPN6-204ENST00000456013 ATP10AO60312 1499 aa23.56■■□□□ 1.36
PTPN6-204ENST00000456013 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.55■■□□□ 1.36
PTPN6-204ENST00000456013 TCERG1O14776 1098 aaKnown RBP23.55■■□□□ 1.36
PTPN6-204ENST00000456013 ERBINQ96RT1 1412 aa23.54■■□□□ 1.36
PTPN6-204ENST00000456013 DEKP35659 375 aaKnown RBP23.54■■□□□ 1.36
PTPN6-204ENST00000456013 SALL2Q9Y467 1007 aaPredicted RBP23.54■■□□□ 1.36
PTPN6-204ENST00000456013 PLEKHH2Q8IVE3 1493 aa23.53■■□□□ 1.36
PTPN6-204ENST00000456013 ZBTB47Q9UFB7 747 aaPredicted RBP23.52■■□□□ 1.36
PTPN6-204ENST00000456013 MAGI2Q86UL8 1455 aa23.52■■□□□ 1.36
PTPN6-204ENST00000456013 RNF17Q9BXT8 1623 aaKnown RBP23.52■■□□□ 1.36
PTPN6-204ENST00000456013 DUOX2Q9NRD8 1548 aa23.51■■□□□ 1.35
PTPN6-204ENST00000456013 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.51■■□□□ 1.35
PTPN6-204ENST00000456013 PANK3Q9H999 370 aa23.5■■□□□ 1.35
PTPN6-204ENST00000456013 TMF1P82094 1093 aa23.49■■□□□ 1.35
PTPN6-204ENST00000456013 CC2D1BQ5T0F9 858 aaKnown RBP23.49■■□□□ 1.35
PTPN6-204ENST00000456013 CDCA7LQ96GN5 454 aa23.49■■□□□ 1.35
PTPN6-204ENST00000456013 NBR1Q14596 966 aa23.49■■□□□ 1.35
PTPN6-204ENST00000456013 MS4A1P11836 297 aa23.47■■□□□ 1.35
PTPN6-204ENST00000456013 SHROOM2Q13796 1616 aa23.45■■□□□ 1.35
PTPN6-204ENST00000456013 CHD1O14646 1710 aa23.44■■□□□ 1.34
PTPN6-204ENST00000456013 PDE4AP27815 886 aa23.43■■□□□ 1.34
PTPN6-204ENST00000456013 BACH2Q9BYV9 841 aa23.41■■□□□ 1.34
PTPN6-204ENST00000456013 ABCC2Q92887 1545 aa23.41■■□□□ 1.34
PTPN6-204ENST00000456013 IQGAP1P46940 1657 aa23.41■■□□□ 1.34
PTPN6-204ENST00000456013 MADDQ8WXG6 1647 aa23.39■■□□□ 1.33
PTPN6-204ENST00000456013 WDR7Q9Y4E6 1490 aa23.38■■□□□ 1.33
PTPN6-204ENST00000456013 PLIN1O60240 522 aa23.37■■□□□ 1.33
PTPN6-204ENST00000456013 CRBNQ96SW2 442 aa23.35■■□□□ 1.33
PTPN6-204ENST00000456013 PLCH2O75038 1416 aa23.35■■□□□ 1.33
PTPN6-204ENST00000456013 SPHKAPQ2M3C7 1700 aa23.35■■□□□ 1.33
PTPN6-204ENST00000456013 RTL5Q5HYW3 569 aaPredicted RBP23.35■■□□□ 1.33
PTPN6-204ENST00000456013 NPM2Q86SE8 214 aaKnown RBP23.34■■□□□ 1.33
PTPN6-204ENST00000456013 ADAMTS8Q9UP79 889 aa23.34■■□□□ 1.33
PTPN6-204ENST00000456013 SYNMO15061 1565 aa23.33■■□□□ 1.33
PTPN6-204ENST00000456013 CEP152O94986 1710 aa23.33■■□□□ 1.33
PTPN6-204ENST00000456013 ABCC1P33527 1531 aa23.33■■□□□ 1.32
PTPN6-204ENST00000456013 PPP2R1AP30153 589 aa23.3■■□□□ 1.32
PTPN6-204ENST00000456013 KNSTRNQ9Y448 316 aa23.3■■□□□ 1.32
PTPN6-204ENST00000456013 TRPM2O94759 1503 aa23.3■■□□□ 1.32
PTPN6-204ENST00000456013 ERCC6L2Q5T890 1561 aa23.29■■□□□ 1.32
PTPN6-204ENST00000456013 EFCAB2Q5VUJ9 269 aa23.29■■□□□ 1.32
PTPN6-204ENST00000456013 CLASP1Q7Z460 1538 aa23.29■■□□□ 1.32
PTPN6-204ENST00000456013 STAC3Q96MF2 364 aa23.28■■□□□ 1.32
PTPN6-204ENST00000456013 SCAPERQ9BY12 1400 aa23.28■■□□□ 1.32
PTPN6-204ENST00000456013 CDCA8Q53HL2 280 aa23.28■■□□□ 1.32
PTPN6-204ENST00000456013 AMER1Q5JTC6 1135 aaPredicted RBP23.28■■□□□ 1.32
PTPN6-204ENST00000456013 SCAF11Q99590 1463 aaKnown RBP23.28■■□□□ 1.32
PTPN6-204ENST00000456013 ZCCHC11Q5TAX3 1644 aaKnown RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms